##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211946.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5289107 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.46822195126701 34.0 31.0 34.0 31.0 34.0 2 32.60165411665901 34.0 31.0 34.0 31.0 34.0 3 32.67926665125134 34.0 31.0 34.0 31.0 34.0 4 36.16701855341554 37.0 35.0 37.0 35.0 37.0 5 36.05673471911232 37.0 35.0 37.0 35.0 37.0 6 36.075589697845025 37.0 35.0 37.0 35.0 37.0 7 36.06239314122403 37.0 35.0 37.0 35.0 37.0 8 36.038138952378915 37.0 35.0 37.0 35.0 37.0 9 37.87921590544491 39.0 38.0 39.0 35.0 39.0 10 37.752030541261504 39.0 37.0 39.0 35.0 39.0 11 37.851938143811424 39.0 38.0 39.0 35.0 39.0 12 37.7893137726274 39.0 38.0 39.0 35.0 39.0 13 37.8400493693926 39.0 38.0 39.0 35.0 39.0 14 39.20887968422647 40.0 39.0 41.0 36.0 41.0 15 39.17342020117952 40.0 39.0 41.0 36.0 41.0 16 39.130531486695205 40.0 39.0 41.0 36.0 41.0 17 39.12023126021084 40.0 39.0 41.0 36.0 41.0 18 39.10880570198334 40.0 38.0 41.0 36.0 41.0 19 39.12192644240323 40.0 39.0 41.0 36.0 41.0 20 39.07859512012141 40.0 39.0 41.0 36.0 41.0 21 39.066056141424255 40.0 39.0 41.0 36.0 41.0 22 39.038019650576175 40.0 39.0 41.0 36.0 41.0 23 38.98023919727848 40.0 39.0 41.0 36.0 41.0 24 38.94701128186667 40.0 38.0 41.0 35.0 41.0 25 38.89767006037125 40.0 38.0 41.0 35.0 41.0 26 38.799622129028585 40.0 38.0 41.0 35.0 41.0 27 38.71654080736124 40.0 38.0 41.0 35.0 41.0 28 38.65304937109421 40.0 38.0 41.0 35.0 41.0 29 38.591419496712774 40.0 38.0 41.0 35.0 41.0 30 38.53503587656669 40.0 38.0 41.0 34.0 41.0 31 38.48395655448075 40.0 38.0 41.0 34.0 41.0 32 38.419331656553744 40.0 38.0 41.0 34.0 41.0 33 38.38133374877839 40.0 38.0 41.0 34.0 41.0 34 38.32639195992821 40.0 38.0 41.0 34.0 41.0 35 38.27334935746242 40.0 38.0 41.0 34.0 41.0 36 38.21182157971091 40.0 38.0 41.0 34.0 41.0 37 38.18205417284997 40.0 38.0 41.0 34.0 41.0 38 38.125410584433254 40.0 38.0 41.0 34.0 41.0 39 38.080389184790555 40.0 38.0 41.0 33.0 41.0 40 38.02987290671185 40.0 38.0 41.0 33.0 41.0 41 37.946984245166526 40.0 38.0 41.0 33.0 41.0 42 37.85942428466658 40.0 37.0 41.0 33.0 41.0 43 36.92999404247258 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 4.0 12 2.0 13 2.0 14 1.0 15 3.0 16 19.0 17 43.0 18 78.0 19 193.0 20 451.0 21 949.0 22 1711.0 23 3138.0 24 5271.0 25 8303.0 26 12325.0 27 18212.0 28 26197.0 29 35954.0 30 49206.0 31 65426.0 32 86074.0 33 115858.0 34 161132.0 35 227698.0 36 343495.0 37 594242.0 38 1393435.0 39 2139680.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.670133162365595 17.351908365627693 12.907604251530552 27.070354220476162 2 18.175034084203627 19.49924628108299 36.55823185274944 25.76748778196395 3 19.923798100511107 21.46971123858905 29.4442332136597 29.162257447240147 4 15.249795475871448 14.974871939629885 33.68988375542412 36.08544882907455 5 16.120225966311516 34.822059754132404 33.463872067628806 15.593842211927269 6 36.166540022729734 33.636869134997646 14.94494250163591 15.25164834063671 7 30.36627922256063 29.69287632108785 20.499301677958112 19.4415427783934 8 26.98480102595769 35.0846749744333 19.152079925779532 18.778444073829476 9 27.722902939948085 14.635476272270537 18.14364882389409 39.49797196388729 10 17.124875711533157 26.01446709246003 32.5666317584424 24.29402543756441 11 37.38956311528581 20.910013731996724 20.562582681726802 21.13784047099066 12 22.264382248269886 23.73998105918447 29.52419000031574 24.471446692229897 13 31.786462251567233 19.14865779799879 23.359954714472593 25.704925235961383 14 23.031903117104648 19.487221566892103 24.831261685573764 32.649613630429485 15 26.457434118840855 26.156135619869293 21.66136930109374 25.725060960196117 16 25.219512481029405 25.176953311778338 23.90352473489381 25.70000947229844 17 24.989549275520424 24.93222390849722 24.595569724719127 25.482657091263235 18 25.207355419355288 24.74464971118943 25.008607313105973 25.0393875563493 19 26.382336375497793 24.55658393751535 24.806909748658896 24.254169938327962 20 25.69288161498718 24.12467737937614 24.811787698755197 25.370653306881486 21 25.30260779371641 24.703395109987376 25.08587933653072 24.908117759765496 22 25.923430930779052 24.171982151240275 24.265948864335698 25.638638053644975 23 25.367155551967468 24.279788629725207 24.738580633744036 25.61447518456329 24 25.156155850127444 24.05629154411132 24.840941958633092 25.946610647128143 25 25.650492606785985 23.914623016702063 24.61097875312411 25.823905623387844 26 25.259708302365596 24.188468866294443 25.03745906445077 25.514363766889193 27 25.901234367162544 24.502075681206676 24.558644776897122 25.038045174733654 28 25.395269938762823 24.934700697112007 24.18173805143288 25.488291312692297 29 25.314878296090438 24.86531280233128 24.708348687216954 25.111460214361326 30 25.822204012889134 24.510640454050183 24.486345237485267 25.18081029557542 31 25.416294281813546 24.05818222244322 24.761476748343338 25.764046747399895 32 24.72296363072254 24.472070616079424 24.843759069347623 25.961206683850413 33 25.067085993911636 23.937367877034816 25.023543671927982 25.97200245712556 34 25.427298029705202 23.94319116629707 25.54291300970088 25.086597794296843 35 25.246454647258982 23.848487088652206 25.318413864571088 25.586644399517727 36 24.909460141381146 23.39566962816218 25.895751400000037 25.799118830456635 37 24.480975711022673 23.039522550782202 26.20771332476352 26.271788413431608 38 24.636748698787905 22.597708838183834 26.552213823619 26.213328639409262 39 23.904980557209374 22.600922991348067 27.484753097261976 26.00934335418058 40 24.534179399282337 22.394366383588004 27.60293939978904 25.46851481734062 41 23.64669499028853 22.497408352676548 28.041501145656532 25.814395511378386 42 23.031165752555204 22.816876270417673 28.228300164848243 25.92365781217888 43 22.72423303215458 22.52382112897319 28.03401405946221 26.71793177941002 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 163.0 1 207.5 2 252.0 3 789.0 4 1326.0 5 1326.0 6 1669.5 7 2013.0 8 1930.5 9 1848.0 10 2455.5 11 3063.0 12 3063.0 13 5222.0 14 7381.0 15 11644.0 16 15907.0 17 15335.0 18 14763.0 19 14763.0 20 17517.5 21 20272.0 22 20945.0 23 21618.0 24 27313.5 25 33009.0 26 33009.0 27 41645.5 28 50282.0 29 59733.5 30 69185.0 31 82367.0 32 95549.0 33 95549.0 34 112243.5 35 128938.0 36 147728.5 37 166519.0 38 190127.0 39 213735.0 40 213735.0 41 240646.5 42 267558.0 43 296602.0 44 325646.0 45 362822.0 46 399998.0 47 399998.0 48 435225.5 49 470453.0 50 491020.0 51 511587.0 52 512188.5 53 512790.0 54 512790.0 55 487053.0 56 461316.0 57 429201.0 58 397086.0 59 364671.0 60 332256.0 61 332256.0 62 291706.0 63 251156.0 64 212491.0 65 173826.0 66 146177.0 67 118528.0 68 118528.0 69 98337.5 70 78147.0 71 65331.0 72 52515.0 73 43566.0 74 34617.0 75 34617.0 76 28816.0 77 23015.0 78 18689.5 79 14364.0 80 11662.0 81 8960.0 82 8960.0 83 6963.0 84 4966.0 85 3847.5 86 2729.0 87 1963.5 88 1198.0 89 1198.0 90 805.5 91 413.0 92 262.5 93 112.0 94 71.5 95 31.0 96 31.0 97 22.0 98 13.0 99 8.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5289107.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.575489558379765 #Duplication Level Percentage of deduplicated Percentage of total 1 80.56636715372362 45.58081663662081 2 10.243669390368195 11.590812212685403 3 3.320766004012975 5.636218871575758 4 1.6244624673343506 3.676190374346175 5 0.961679650326611 2.7203748507779735 6 0.6298232359452041 2.1379534745305713 7 0.4476385193870922 1.772775786565911 8 0.3365132087858968 1.5230719623938702 9 0.2544149897643199 1.295428733721592 >10 1.4870603584026338 15.3949120396897 >50 0.08664381335077816 3.3287219676203192 >100 0.03858421770237584 3.958988921342739 >500 0.001807854228213904 0.6602752897723083 >1k 4.687007851871253E-4 0.376541064564948 >5k 1.0043588253239644E-4 0.3469178137919799 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7344 0.13885141669472748 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5658 0.10697458001889544 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5314 0.10047064655715984 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.672034995699652E-5 2 0.0 0.0 0.0 0.0 5.672034995699652E-5 3 0.0 0.0 0.0 0.0 5.672034995699652E-5 4 0.0 0.0 0.0 0.0 5.672034995699652E-5 5 0.0 0.0 0.0 0.0 7.562713327599536E-5 6 0.0 0.0 0.0 0.0 9.45339165949942E-5 7 0.0 0.0 0.0 0.0 9.45339165949942E-5 8 0.0 0.0 0.0 0.0 9.45339165949942E-5 9 0.0 0.0 0.0 0.0 9.45339165949942E-5 10 1.890678331899884E-5 0.0 0.0 1.890678331899884E-5 9.45339165949942E-5 11 1.890678331899884E-5 0.0 0.0 3.781356663799768E-5 9.45339165949942E-5 12 1.890678331899884E-5 0.0 0.0 9.45339165949942E-5 1.512542665519907E-4 13 1.890678331899884E-5 0.0 0.0 9.45339165949942E-5 1.512542665519907E-4 14 1.890678331899884E-5 0.0 0.0 1.323474832329919E-4 1.890678331899884E-4 15 1.890678331899884E-5 0.0 0.0 1.512542665519907E-4 2.457881831469849E-4 16 1.890678331899884E-5 0.0 0.0 2.2688139982798608E-4 2.836017497849826E-4 17 1.890678331899884E-5 0.0 0.0 3.59228883060978E-4 3.025085331039814E-4 18 1.890678331899884E-5 0.0 0.0 3.781356663799768E-4 3.9704244969897566E-4 19 1.890678331899884E-5 0.0 0.0 5.482967162509664E-4 3.9704244969897566E-4 20 1.890678331899884E-5 0.0 0.0 6.239238495269618E-4 4.3485601633697334E-4 21 1.890678331899884E-5 0.0 0.0 8.129916827169501E-4 4.3485601633697334E-4 22 1.890678331899884E-5 0.0 0.0 0.0012478476990539235 4.3485601633697334E-4 23 1.890678331899884E-5 0.0 0.0 0.0015881697987959026 4.5376279965597216E-4 24 1.890678331899884E-5 0.0 0.0 0.0026658564479788366 4.5376279965597216E-4 25 3.781356663799768E-5 0.0 0.0 0.003686822747204774 4.5376279965597216E-4 26 3.781356663799768E-5 0.0 0.0 0.006087984228717627 4.5376279965597216E-4 27 3.781356663799768E-5 0.0 0.0 0.020721834517622727 4.5376279965597216E-4 28 3.781356663799768E-5 0.0 0.0 0.07543806544280537 4.5376279965597216E-4 29 3.781356663799768E-5 0.0 0.0 0.16233364157692404 4.5376279965597216E-4 30 3.781356663799768E-5 0.0 0.0 0.2819190460695917 4.5376279965597216E-4 31 3.781356663799768E-5 0.0 0.0 0.7819467445071541 4.7266958297497103E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4755 0.0 20.814932 37 TACTTAC 1255 0.0 16.36255 31 TCTTATA 8155 0.0 15.698344 37 TATACCG 230 4.0017767E-11 13.673913 5 CTCGTTA 1135 0.0 13.528634 22 TAGATCG 175 5.315469E-7 12.685715 5 CTCTTAT 12680 0.0 12.678627 37 GGAGTGT 1990 0.0 12.643216 6 TACGGAT 1645 0.0 12.483282 27 AGTGTAC 1720 0.0 12.369185 27 GGTATCA 6945 0.0 12.226781 1 TAAGACT 790 0.0 12.177215 4 GTACTTA 1695 0.0 12.115044 30 TCGTTAC 1190 0.0 11.970589 23 ACGGATG 1795 0.0 11.749304 28 GTCTTAG 890 0.0 11.640449 1 TTACGGA 1810 0.0 11.549724 26 TTAGCCG 545 0.0 11.541285 4 ACTTACA 1240 0.0 11.487903 32 GAGTGTC 1970 0.0 11.362944 7 >>END_MODULE