##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211945.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 893222 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54073679331678 34.0 31.0 34.0 31.0 34.0 2 32.66304345392299 34.0 31.0 34.0 31.0 34.0 3 32.74248730998565 34.0 31.0 34.0 31.0 34.0 4 36.20510018785923 37.0 35.0 37.0 35.0 37.0 5 36.10758019842771 37.0 35.0 37.0 35.0 37.0 6 36.13342707635952 37.0 36.0 37.0 35.0 37.0 7 36.10985175018081 37.0 35.0 37.0 35.0 37.0 8 36.09351426633021 37.0 35.0 37.0 35.0 37.0 9 37.95005273045223 39.0 38.0 39.0 35.0 39.0 10 37.82354330726292 39.0 38.0 39.0 35.0 39.0 11 37.928810530864666 39.0 38.0 39.0 35.0 39.0 12 37.86006838165652 39.0 38.0 39.0 35.0 39.0 13 37.91564135231779 39.0 38.0 39.0 35.0 39.0 14 39.2940646334282 40.0 39.0 41.0 36.0 41.0 15 39.26760648528585 40.0 39.0 41.0 36.0 41.0 16 39.21996883193652 40.0 39.0 41.0 36.0 41.0 17 39.201748277583846 40.0 39.0 41.0 36.0 41.0 18 39.18852312191146 40.0 39.0 41.0 36.0 41.0 19 39.20271668185513 40.0 39.0 41.0 36.0 41.0 20 39.15813090138845 40.0 39.0 41.0 36.0 41.0 21 39.14470982577679 40.0 39.0 41.0 36.0 41.0 22 39.127838320148854 40.0 39.0 41.0 36.0 41.0 23 39.069554937070514 40.0 39.0 41.0 36.0 41.0 24 39.040172543891664 40.0 39.0 41.0 36.0 41.0 25 38.98191043212102 40.0 38.0 41.0 35.0 41.0 26 38.891300259062135 40.0 38.0 41.0 35.0 41.0 27 38.80809585970789 40.0 38.0 41.0 35.0 41.0 28 38.7329510468842 40.0 38.0 41.0 35.0 41.0 29 38.67486918145769 40.0 38.0 41.0 35.0 41.0 30 38.63188658586555 40.0 38.0 41.0 35.0 41.0 31 38.5909650680346 40.0 38.0 41.0 35.0 41.0 32 38.534675590166835 40.0 38.0 41.0 35.0 41.0 33 38.50039407896357 40.0 38.0 41.0 34.0 41.0 34 38.455539608294465 40.0 38.0 41.0 34.0 41.0 35 38.41058102017192 40.0 38.0 41.0 34.0 41.0 36 38.336694573129634 40.0 38.0 41.0 34.0 41.0 37 38.32932462478533 40.0 38.0 41.0 34.0 41.0 38 38.28322522284493 40.0 38.0 41.0 34.0 41.0 39 38.23881409100985 40.0 38.0 41.0 34.0 41.0 40 38.19362711621523 40.0 38.0 41.0 34.0 41.0 41 38.12611310514072 40.0 38.0 41.0 33.0 41.0 42 38.046360255345256 40.0 38.0 41.0 33.0 41.0 43 37.07063081742277 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 0.0 15 2.0 16 3.0 17 2.0 18 12.0 19 22.0 20 64.0 21 118.0 22 235.0 23 477.0 24 806.0 25 1253.0 26 1868.0 27 2746.0 28 3928.0 29 5573.0 30 7773.0 31 10362.0 32 13807.0 33 18733.0 34 25884.0 35 37012.0 36 55429.0 37 94349.0 38 225910.0 39 386853.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.572034723730496 15.986507273667689 12.197751510822616 28.243706491779196 2 18.941427774954043 18.624597244581974 34.871510106110236 27.562464874353743 3 20.51785558349436 20.3351462458381 28.767540432277755 30.379457738389785 4 16.043268078932226 14.021374305603759 31.958236586201416 37.9771210292626 5 17.05611818786371 33.983488987060326 32.94343399513223 16.016958829943732 6 38.646607450331494 31.60882736878402 14.059438750948813 15.685126429935673 7 31.758958019394957 28.650436285716207 19.407829184681972 20.182776510206867 8 28.513964053729087 34.0050961575062 18.417817742957517 19.0631220458072 9 28.685142103530815 13.58352122988462 16.684765937247402 41.04657072933716 10 17.553642879373772 25.14044660789815 31.77015344449644 25.53575706823164 11 39.37520571593624 19.675063981854453 19.315131064841662 21.63459923736764 12 23.187740561696867 22.443916517954104 28.647861337942864 25.720481582406162 13 33.43659247085271 17.66817207816198 22.25191497746361 26.643320473521698 14 23.930668971431516 18.1081522846504 23.578460897738747 34.38271784617934 15 28.12425130594634 24.638107883594447 20.483037811428737 26.754602999030475 16 26.576035968661767 23.861033427300267 22.78213031027001 26.780800293767953 17 26.4632980378898 23.496734294497895 23.166581208255057 26.873386459357246 18 26.53394117028018 23.645185631343608 23.620443741869323 26.20042945650689 19 28.055847258576254 23.338095120809832 23.24830781149591 25.357749809118 20 27.225146716045955 22.508849983542724 23.13836873699931 27.127634563412006 21 26.44695271724163 23.5886487345811 23.68784020098027 26.276558347197 22 27.539066435891634 22.81246991229504 22.338567567749116 27.309896084064206 23 26.68451963789517 22.94278466047634 23.26789980542351 27.104795896204976 24 26.390751683232168 22.536502683543397 23.542075766158916 27.530669867065523 25 27.210032892158946 22.329835136169958 22.898898594078513 27.561233377592583 26 26.638618394979076 22.712494766138764 23.78378499410001 26.865101844782146 27 27.738009139945053 22.92341657505077 23.165237757242878 26.173336527761297 28 26.662688558947274 23.988661273457215 22.43551994912799 26.913130218467522 29 26.870475648830862 23.5999561139336 23.177552724854518 26.352015512381023 30 27.603328175974166 23.00503122404061 22.85691574994794 26.534724850037282 31 26.878536354903932 22.701859112292354 23.39048971028479 27.029114822518924 32 26.09284142128161 22.924871980313966 23.38086164469751 27.601424953706914 33 26.311711982015666 22.57109654710699 23.58976827709125 27.527423193786092 34 26.742847802673914 22.70085152403322 24.36158088358773 26.194719789705132 35 26.602904988905333 22.389842614713924 24.048332889248137 26.958919507132606 36 26.07951886541084 22.155858230092853 24.788126579954366 26.976496324541937 37 25.462315079565883 21.653183643036108 25.214672276321004 27.669829001077 38 25.956257235043473 21.04851873330482 25.35371945608147 27.64150457557024 39 24.72117793784748 21.171780363672188 26.66503959821858 27.442002100261746 40 25.720033765402107 20.67683061993547 26.871259328587964 26.731876286074456 41 24.78174518764652 20.772887367306225 27.381098987709663 27.064268457337594 42 23.741802149969438 21.00474462115801 28.13466305129072 27.11879017758183 43 23.33093004874488 20.616151415885412 27.8211911484491 28.231727386920607 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.5 2 3.0 3 20.5 4 38.0 5 38.0 6 46.0 7 54.0 8 54.5 9 55.0 10 72.0 11 89.0 12 89.0 13 144.5 14 200.0 15 316.0 16 432.0 17 430.0 18 428.0 19 428.0 20 553.0 21 678.0 22 806.5 23 935.0 24 1295.5 25 1656.0 26 1656.0 27 2248.5 28 2841.0 29 3680.5 30 4520.0 31 5759.0 32 6998.0 33 6998.0 34 8998.0 35 10998.0 36 13694.5 37 16391.0 38 20223.5 39 24056.0 40 24056.0 41 28873.0 42 33690.0 43 39775.0 44 45860.0 45 54279.0 46 62698.0 47 62698.0 48 72144.0 49 81590.0 50 88761.5 51 95933.0 52 98855.0 53 101777.0 54 101777.0 55 98283.0 56 94789.0 57 88897.0 58 83005.0 59 77204.5 60 71404.0 61 71404.0 62 62508.0 63 53612.0 64 45048.5 65 36485.0 66 30252.0 67 24019.0 68 24019.0 69 19583.5 70 15148.0 71 12300.0 72 9452.0 73 7567.0 74 5682.0 75 5682.0 76 4567.0 77 3452.0 78 2752.5 79 2053.0 80 1605.5 81 1158.0 82 1158.0 83 873.5 84 589.0 85 431.5 86 274.0 87 201.0 88 128.0 89 128.0 90 79.0 91 30.0 92 20.5 93 11.0 94 9.0 95 7.0 96 7.0 97 3.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 893222.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.14944631425969 #Duplication Level Percentage of deduplicated Percentage of total 1 86.66037047091821 62.524977468653695 2 7.660606553600586 11.05417042547343 3 2.345601637491317 5.077015782564582 4 1.0720885304922916 3.0940237549954865 5 0.6166132180655789 2.2244151136742696 6 0.4118240399214118 1.7827725875538867 7 0.26797351049373536 1.3533898286308026 8 0.19301752150892726 1.114088584465585 9 0.12115995418231962 0.7867461248743889 >10 0.6042546568168945 7.4226718024333005 >50 0.03218780024821011 1.6072704815248722 >100 0.0136802756056284 1.687923678304252 >500 6.218306549326631E-4 0.2705343668513895 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1195425101486528E-4 2 0.0 0.0 0.0 0.0 1.1195425101486528E-4 3 0.0 0.0 0.0 1.1195425101486528E-4 2.2390850202973057E-4 4 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 5 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 6 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 7 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 8 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 9 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 10 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 11 0.0 0.0 0.0 1.1195425101486528E-4 3.3586275304459584E-4 12 0.0 0.0 0.0 1.1195425101486528E-4 4.4781700405946114E-4 13 0.0 0.0 0.0 1.1195425101486528E-4 4.4781700405946114E-4 14 0.0 0.0 0.0 1.1195425101486528E-4 6.717255060891917E-4 15 0.0 0.0 0.0 1.1195425101486528E-4 7.83679757104057E-4 16 0.0 0.0 0.0 1.1195425101486528E-4 7.83679757104057E-4 17 0.0 0.0 0.0 1.1195425101486528E-4 7.83679757104057E-4 18 0.0 0.0 0.0 1.1195425101486528E-4 8.956340081189223E-4 19 0.0 0.0 0.0 1.1195425101486528E-4 8.956340081189223E-4 20 0.0 0.0 0.0 3.3586275304459584E-4 8.956340081189223E-4 21 0.0 0.0 0.0 6.717255060891917E-4 0.0010075882591337876 22 0.0 0.0 0.0 0.0014554052631932488 0.0010075882591337876 23 0.0 0.0 0.0 0.0019032222672527097 0.0011195425101486528 24 0.0 0.0 0.0 0.003134719028416228 0.0011195425101486528 25 0.0 0.0 0.0 0.004366215789579746 0.0011195425101486528 26 0.0 0.0 0.0 0.006829209311906783 0.0011195425101486528 27 0.0 0.0 0.0 0.018248542915423042 0.0011195425101486528 28 0.0 0.0 0.0 0.06605300809877052 0.0011195425101486528 29 0.0 0.0 0.0 0.14598834332338434 0.0011195425101486528 30 0.0 0.0 0.0 0.25727086883216044 0.0011195425101486528 31 0.0 0.0 0.0 0.779537449816507 0.0011195425101486528 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 750 0.0 20.966665 37 TTAGACA 70 1.2188108E-4 18.5 4 TCTTATA 1445 0.0 18.307959 37 TACTTAC 195 0.0 18.02564 31 CCCTATA 105 4.794292E-7 17.61905 2 TTAGACT 85 2.7220156E-5 17.411764 4 CGTATTA 75 2.0666164E-4 17.266666 14 TCTAGTA 65 0.0015795613 17.076923 2 GCTCTAG 65 0.0015795613 17.076923 1 CTTAGAC 100 5.874839E-6 16.650002 3 CTAGATC 90 4.444171E-5 16.444445 4 CGCGGTA 90 4.444171E-5 16.444445 22 CGATAGT 90 4.444171E-5 16.444445 28 TCGTTAC 230 0.0 16.086956 23 ACTTACA 185 1.8189894E-11 16.0 32 TCTAGCA 105 9.338351E-6 15.857144 2 TAGATCA 70 0.0025918863 15.857143 5 TGAATAG 70 0.0025918863 15.857143 5 GGACCGT 130 2.5868758E-7 15.653846 6 TTAAACA 95 7.0568596E-5 15.578948 4 >>END_MODULE