##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211944.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3808151 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61513238314342 34.0 31.0 34.0 31.0 34.0 2 32.738086016021946 34.0 31.0 34.0 31.0 34.0 3 32.81728902031458 34.0 31.0 34.0 31.0 34.0 4 36.25947185392596 37.0 37.0 37.0 35.0 37.0 5 36.17037533438143 37.0 35.0 37.0 35.0 37.0 6 36.19069832052353 37.0 37.0 37.0 35.0 37.0 7 36.173925088579736 37.0 36.0 37.0 35.0 37.0 8 36.15406636974217 37.0 36.0 37.0 35.0 37.0 9 38.00798130116164 39.0 38.0 39.0 35.0 39.0 10 37.898759266636226 39.0 38.0 39.0 35.0 39.0 11 37.988460279017296 39.0 38.0 39.0 35.0 39.0 12 37.93311032046786 39.0 38.0 39.0 35.0 39.0 13 37.97940470322737 39.0 38.0 39.0 35.0 39.0 14 39.390277591408534 40.0 39.0 41.0 37.0 41.0 15 39.36299348423947 40.0 39.0 41.0 36.0 41.0 16 39.32181628302029 40.0 39.0 41.0 36.0 41.0 17 39.31575428600389 40.0 39.0 41.0 36.0 41.0 18 39.303167337639714 40.0 39.0 41.0 36.0 41.0 19 39.31778466767731 40.0 39.0 41.0 36.0 41.0 20 39.279892525270135 40.0 39.0 41.0 36.0 41.0 21 39.26828190373754 40.0 39.0 41.0 36.0 41.0 22 39.24176299731812 40.0 39.0 41.0 36.0 41.0 23 39.18660315728027 40.0 39.0 41.0 36.0 41.0 24 39.16027647012947 40.0 39.0 41.0 36.0 41.0 25 39.11155229926544 40.0 39.0 41.0 36.0 41.0 26 39.02555334596764 40.0 39.0 41.0 36.0 41.0 27 38.948947665152986 40.0 39.0 41.0 35.0 41.0 28 38.888359731533754 40.0 38.0 41.0 35.0 41.0 29 38.831674216699916 40.0 38.0 41.0 35.0 41.0 30 38.78047692961755 40.0 38.0 41.0 35.0 41.0 31 38.73085127139129 40.0 38.0 41.0 35.0 41.0 32 38.66780492685295 40.0 38.0 41.0 35.0 41.0 33 38.63640832519509 40.0 38.0 41.0 35.0 41.0 34 38.586629836894595 40.0 38.0 41.0 35.0 41.0 35 38.5407537673795 40.0 38.0 41.0 35.0 41.0 36 38.47266350520239 40.0 38.0 41.0 34.0 41.0 37 38.44997900555939 40.0 38.0 41.0 34.0 41.0 38 38.40183858255621 40.0 38.0 41.0 34.0 41.0 39 38.353721267880395 40.0 38.0 41.0 34.0 41.0 40 38.306306656432476 40.0 38.0 41.0 34.0 41.0 41 38.22595795177239 40.0 38.0 41.0 34.0 41.0 42 38.14416024994807 40.0 38.0 41.0 34.0 41.0 43 37.24022051646587 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 3.0 12 1.0 13 0.0 14 3.0 15 3.0 16 8.0 17 20.0 18 42.0 19 102.0 20 216.0 21 489.0 22 926.0 23 1792.0 24 3094.0 25 5000.0 26 7579.0 27 11174.0 28 16027.0 29 22223.0 30 30834.0 31 40902.0 32 54111.0 33 72888.0 34 102609.0 35 146665.0 36 220403.0 37 381825.0 38 908187.0 39 1781020.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.94013026269179 17.13642657552182 12.755297780996605 27.16814538078978 2 17.90089206021505 19.391799327285078 36.87461447825992 25.832694134239947 3 19.902572140653035 21.410731874865256 29.478032777586815 29.208663206894897 4 15.12321859085945 14.718822861803538 33.71223987704269 36.445718670294326 5 16.06945207792443 35.02983468880305 33.45550110801804 15.445212125254487 6 36.4141285363947 33.45673530277555 14.880239780407866 15.24889638042189 7 30.46060936134098 29.929931875075333 20.312902508330158 19.296556255253535 8 27.086084559146943 35.42803318460849 19.07689584787998 18.408986408364584 9 28.060862082412175 14.611684253066645 17.837764311341644 39.489689353179536 10 17.081150406063205 26.135728336402625 32.34677406436877 24.436347193165396 11 37.51558170881354 20.917684198972154 20.468437307239128 21.098296784975176 12 22.263849306395674 23.444212164906276 29.57563920128167 24.716299327416376 13 31.865306811625903 18.969284568810426 23.468397130260854 25.697011489302813 14 23.04774679365393 19.17799478014396 24.776459756979175 32.99779866922294 15 26.69925641078833 25.93610389924139 21.63251929873579 25.732120391234485 16 25.281770602058586 25.131986625530345 23.879961692695485 25.706281079715588 17 25.092623690604704 24.910330498974435 24.373403260532474 25.623642549888388 18 25.2127344740269 24.872306796658012 24.962481792344892 24.9524769369702 19 26.599286635430158 24.64235267981758 24.5615785718581 24.19678211289416 20 25.700215143779747 23.990934183019526 24.59989112826671 25.70895954493401 21 25.184610589233465 24.771811832041323 25.140836064536305 24.902741514188907 22 26.067164878703604 24.078063081007027 23.858744046651513 25.996027993637856 23 25.30724228109652 24.2641376352986 24.773439918742717 25.655180164862163 24 25.098400772448358 23.868013637064287 24.8218361089148 26.211749481572554 25 25.739893192260492 23.765286618098916 24.470852127449778 26.02396806219081 26 25.239729201914525 24.06923990146399 25.07718312640439 25.613847770217095 27 26.04815302754539 24.41331764417955 24.493251449325406 25.04527787894965 28 25.369372170378746 25.126209543686688 23.89198852671546 25.612429759219108 29 25.397443536246328 24.93244096675788 24.594639235681566 25.07547626131422 30 26.076644544819782 24.441914199305646 24.244784411122353 25.236656844752215 31 25.62955092904667 24.023916068454216 24.64828731843879 25.69824568406032 32 24.84985495585653 24.521349074655916 24.674021592105984 25.95477437738157 33 25.15971661837989 23.816361273489417 24.79972564113135 26.224196466999338 34 25.517291725039264 24.025491636229763 25.344294383284698 25.11292225544628 35 25.39232294097582 23.9231847686712 25.05966806463294 25.62482422572004 36 25.029128309250343 23.50697228129872 25.69078799658942 25.773111412861518 37 24.548685175561577 23.330219836345776 25.9800359807161 26.141059007376544 38 25.054547469362426 22.832550494977745 25.956875134415625 26.1560269012442 39 24.03607419978882 22.92364457186703 27.10572663741538 25.93455459092877 40 24.97723961050914 22.541595645760896 27.084403953519697 25.39676079021026 41 24.04655172549618 22.806133475274486 27.367979893654425 25.779334905574906 42 23.563167531959735 22.97401022175854 27.73093819021357 25.731884056068154 43 23.142622233204513 22.65934307751977 27.362071514496144 26.83596317477957 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 80.0 1 114.0 2 148.0 3 471.5 4 795.0 5 795.0 6 1061.0 7 1327.0 8 1227.0 9 1127.0 10 1568.0 11 2009.0 12 2009.0 13 3413.0 14 4817.0 15 7646.5 16 10476.0 17 9926.0 18 9376.0 19 9376.0 20 10949.5 21 12523.0 22 12808.0 23 13093.0 24 17021.0 25 20949.0 26 20949.0 27 26176.5 28 31404.0 29 37668.0 30 43932.0 31 52814.0 32 61696.0 33 61696.0 34 73753.0 35 85810.0 36 99596.0 37 113382.0 38 130964.5 39 148547.0 40 148547.0 41 169009.5 42 189472.0 43 211816.5 44 234161.0 45 263783.0 46 293405.0 47 293405.0 48 322514.0 49 351623.0 50 367449.5 51 383276.0 52 385657.5 53 388039.0 54 388039.0 55 365817.5 56 343596.0 57 317462.0 58 291328.0 59 266709.0 60 242090.0 61 242090.0 62 212102.5 63 182115.0 64 153002.0 65 123889.0 66 103200.0 67 82511.0 68 82511.0 69 67644.5 70 52778.0 71 43754.5 72 34731.0 73 28388.0 74 22045.0 75 22045.0 76 17901.0 77 13757.0 78 11018.0 79 8279.0 80 6603.0 81 4927.0 82 4927.0 83 3744.0 84 2561.0 85 1941.5 86 1322.0 87 922.5 88 523.0 89 523.0 90 339.0 91 155.0 92 102.0 93 49.0 94 33.0 95 17.0 96 17.0 97 13.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3808151.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.409405364514754 #Duplication Level Percentage of deduplicated Percentage of total 1 80.66708175013963 46.31049195766216 2 10.246645965693041 11.76507703742283 3 3.359657252395337 5.786277752657874 4 1.5811912378794961 3.6310099493697146 5 0.9540599815298001 2.7386008110852877 6 0.6248239291836558 2.1522462139172016 7 0.4490993956348539 1.8047770477071938 8 0.32802740275394277 1.5065486508296035 9 0.2529403176054958 1.3069037903798713 >10 1.4246230781570879 14.675223235428048 >50 0.07285784392098751 2.8239618502282795 >100 0.035926243715027006 3.776448637947756 >500 0.002196251771906328 0.8122008089050712 >1k 8.693496197028288E-4 0.9102322564591114 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4932 0.12951167114959464 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 5.2518925851417134E-5 5 0.0 0.0 0.0 0.0 5.2518925851417134E-5 6 0.0 0.0 0.0 0.0 7.87783887771257E-5 7 0.0 0.0 0.0 0.0 7.87783887771257E-5 8 0.0 0.0 0.0 0.0 1.0503785170283427E-4 9 0.0 0.0 0.0 5.2518925851417134E-5 1.0503785170283427E-4 10 0.0 0.0 0.0 5.2518925851417134E-5 1.0503785170283427E-4 11 0.0 0.0 0.0 1.0503785170283427E-4 1.0503785170283427E-4 12 0.0 2.6259462925708567E-5 0.0 1.3129731462854284E-4 1.0503785170283427E-4 13 0.0 2.6259462925708567E-5 0.0 1.575567775542514E-4 1.0503785170283427E-4 14 0.0 2.6259462925708567E-5 0.0 1.575567775542514E-4 1.8381624047995995E-4 15 0.0 2.6259462925708567E-5 0.0 2.1007570340566853E-4 2.363351663313771E-4 16 0.0 2.6259462925708567E-5 0.0 3.151135551085028E-4 2.625946292570857E-4 17 0.0 2.6259462925708567E-5 0.0 3.938919438856285E-4 2.625946292570857E-4 18 0.0 2.6259462925708567E-5 0.0 3.938919438856285E-4 2.8885409218279423E-4 19 0.0 2.6259462925708567E-5 0.0 4.464108697370456E-4 3.151135551085028E-4 20 0.0 2.6259462925708567E-5 0.0 6.564865731427141E-4 3.4137301803421134E-4 21 0.0 2.6259462925708567E-5 0.0 0.001024119054102634 3.938919438856285E-4 22 0.0 2.6259462925708567E-5 0.0 0.0013654920721368454 4.2015140681133707E-4 23 0.0 2.6259462925708567E-5 0.0 0.001811902941873891 4.464108697370456E-4 24 0.0 2.6259462925708567E-5 0.0 0.002494648977942314 4.464108697370456E-4 25 0.0 2.6259462925708567E-5 0.0 0.003203654476936445 4.464108697370456E-4 26 0.0 2.6259462925708567E-5 0.0 0.005593265603175924 4.726703326627542E-4 27 0.0 2.6259462925708567E-5 0.0 0.01741002391974478 4.726703326627542E-4 28 0.0 2.6259462925708567E-5 0.0 0.061079510765198124 4.989297955884628E-4 29 0.0 5.2518925851417134E-5 0.0 0.13363440682893088 4.989297955884628E-4 30 2.6259462925708567E-5 5.2518925851417134E-5 0.0 0.2327113604476293 4.989297955884628E-4 31 2.6259462925708567E-5 5.2518925851417134E-5 0.0 0.6886281557637814 4.989297955884628E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3015 0.0 20.616917 37 TACTTAC 1070 0.0 18.672897 31 TCTTATA 5300 0.0 15.951886 37 AGTGTAC 1535 0.0 14.583061 27 TATCGCG 425 0.0 14.364706 7 GTACTTA 1450 0.0 14.289655 30 GTGTACT 1545 0.0 13.770226 28 GGAGTGT 1950 0.0 13.75641 6 TCTATAC 390 0.0 13.756409 3 TCGATTA 135 6.576058E-6 13.703703 13 GTATTAG 380 0.0 13.631579 1 GTATCGC 590 0.0 13.48305 6 CTACAGT 1755 0.0 13.387465 23 ACTTACA 1010 0.0 13.188118 32 TTATACT 590 0.0 13.169492 4 GACGTAT 185 7.397648E-8 13.0 28 TGTATCG 630 0.0 12.920635 5 TAATACG 290 0.0 12.75862 27 CAGTGTA 1895 0.0 12.593668 26 ACAGCTA 1890 0.0 12.431217 19 >>END_MODULE