##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211943.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3697608 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.588007977048946 34.0 31.0 34.0 31.0 34.0 2 32.714240124967276 34.0 31.0 34.0 31.0 34.0 3 32.79521328383106 34.0 31.0 34.0 31.0 34.0 4 36.24607962769444 37.0 37.0 37.0 35.0 37.0 5 36.15108334901915 37.0 35.0 37.0 35.0 37.0 6 36.17026412751162 37.0 36.0 37.0 35.0 37.0 7 36.15627373155835 37.0 36.0 37.0 35.0 37.0 8 36.13685712493049 37.0 36.0 37.0 35.0 37.0 9 37.985901426002975 39.0 38.0 39.0 35.0 39.0 10 37.87763467625557 39.0 38.0 39.0 35.0 39.0 11 37.96865027336592 39.0 38.0 39.0 35.0 39.0 12 37.91307867140054 39.0 38.0 39.0 35.0 39.0 13 37.957551746967226 39.0 38.0 39.0 35.0 39.0 14 39.36464736121298 40.0 39.0 41.0 36.0 41.0 15 39.33596287113183 40.0 39.0 41.0 36.0 41.0 16 39.2968867981679 40.0 39.0 41.0 36.0 41.0 17 39.285678200609695 40.0 39.0 41.0 36.0 41.0 18 39.27363906612059 40.0 39.0 41.0 36.0 41.0 19 39.29086506736247 40.0 39.0 41.0 36.0 41.0 20 39.249705755720996 40.0 39.0 41.0 36.0 41.0 21 39.24018230163933 40.0 39.0 41.0 36.0 41.0 22 39.216930512915376 40.0 39.0 41.0 36.0 41.0 23 39.15750966570821 40.0 39.0 41.0 36.0 41.0 24 39.134996462577966 40.0 39.0 41.0 36.0 41.0 25 39.08241598352232 40.0 39.0 41.0 36.0 41.0 26 38.99588707077657 40.0 39.0 41.0 36.0 41.0 27 38.91738118264565 40.0 38.0 41.0 35.0 41.0 28 38.861434743758664 40.0 38.0 41.0 35.0 41.0 29 38.80223512065097 40.0 38.0 41.0 35.0 41.0 30 38.751599141931756 40.0 38.0 41.0 35.0 41.0 31 38.70640478925835 40.0 38.0 41.0 35.0 41.0 32 38.64858578843403 40.0 38.0 41.0 35.0 41.0 33 38.616855815976166 40.0 38.0 41.0 35.0 41.0 34 38.568459122762604 40.0 38.0 41.0 35.0 41.0 35 38.521679691303135 40.0 38.0 41.0 35.0 41.0 36 38.45578168372634 40.0 38.0 41.0 34.0 41.0 37 38.43471806638237 40.0 38.0 41.0 34.0 41.0 38 38.38343356029087 40.0 38.0 41.0 34.0 41.0 39 38.342474648475445 40.0 38.0 41.0 34.0 41.0 40 38.29398059502251 40.0 38.0 41.0 34.0 41.0 41 38.21498114456698 40.0 38.0 41.0 34.0 41.0 42 38.132238733797635 40.0 38.0 41.0 34.0 41.0 43 37.21467067358141 39.0 36.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 1.0 14 3.0 15 5.0 16 8.0 17 20.0 18 43.0 19 91.0 20 206.0 21 476.0 22 978.0 23 1806.0 24 3046.0 25 5018.0 26 7343.0 27 10929.0 28 15630.0 29 21912.0 30 30079.0 31 40633.0 32 53420.0 33 71632.0 34 100939.0 35 143855.0 36 217839.0 37 376485.0 38 897357.0 39 1697850.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.12028208506688 16.993120958197842 12.60417545613272 27.28242150060255 2 17.88526528501669 19.34131470940132 36.76541699390525 26.00800301167674 3 19.926936549250218 21.35691506509073 29.4300531586907 29.286095226968357 4 15.098166165802324 14.670484269830657 33.73786512794217 36.49348443642484 5 16.058760149804954 34.976882352050296 33.475371104779086 15.488986393365655 6 36.45243086882114 33.45349209543034 14.898739942146383 15.195337093602134 7 30.56027031529573 29.745500334270154 20.370196083522103 19.324033266912014 8 27.200557765993583 35.291058435615675 19.034197243190736 18.474186555200014 9 27.947770558696323 14.5512179765946 17.843724916216104 39.65728654849297 10 17.037257600048463 25.985961735262364 32.485460870919795 24.491319793769378 11 37.59535894556697 20.85875517361494 20.490246667575363 21.055639213242724 12 22.32251228361687 23.384171604994364 29.575498538514626 24.71781757287414 13 31.80786064937116 18.906952819228 23.50424923355856 25.780937297842282 14 23.10353071499196 19.07370927367098 24.77352926540618 33.049230745930885 15 26.589162507220887 25.998050631651598 21.566212535239 25.846574325888522 16 25.376540725788132 25.043460529077176 23.775667945331143 25.804330799803548 17 25.1003080910686 24.947587737802383 24.440313846140533 25.511790324988482 18 25.299815448257363 24.806469479728516 24.87207946326382 25.0216356087503 19 26.564281557158033 24.588003920372305 24.53102113582619 24.316693386643472 20 25.73874786077919 24.008007338798485 24.580377368287824 25.672867432134506 21 25.254921560100474 24.711083489650605 25.00684226126728 25.027152688981637 22 26.03572363538807 24.054145274458516 23.841548373975822 26.068582716177595 23 25.328239229253075 24.14590730007075 24.72495732376174 25.800896146914436 24 25.14019874470198 23.91973405509724 24.77488149095307 26.16518570924771 25 25.79575768983624 23.729557054182056 24.433255228785743 26.04143002719596 26 25.366777657339558 23.99199698832326 24.975200183469962 25.66602517086722 27 26.019929641000346 24.47812207243169 24.473578594594127 25.02836969197384 28 25.512223037163483 24.922896099316098 23.93788092193656 25.626999941583854 29 25.391063628161774 24.899691908931395 24.585461736344143 25.123782726562688 30 26.10647207600157 24.3763265332615 24.260873516067686 25.256327874669243 31 25.66099489183277 23.959083818511857 24.595143671259905 25.78477761839546 32 24.93038742884589 24.445398214196853 24.640145737460543 25.984068619496714 33 25.216815844189 23.84606480730245 24.770824814312387 26.16629453419616 34 25.529423346119977 23.911242078662745 25.361476933195732 25.197857642021543 35 25.34232941945171 23.868728107468396 25.065555894513423 25.72338657856647 36 25.066340185330628 23.453270330440652 25.614261976932113 25.86612750729661 37 24.6026350007897 23.22588008247494 25.91196795333632 26.259516963399044 38 24.958703031797853 22.827920104024006 25.969978429298074 26.24339843488006 39 24.08421877062144 22.85637092953066 27.02563386924736 26.03377643060054 40 24.903559273995512 22.500762655208447 27.119397188668998 25.47628088212704 41 24.048195482052183 22.689533341554867 27.390275010222826 25.87199616617013 42 23.540110255062192 22.931203091295778 27.732171717499533 25.7965149361425 43 23.17920125659616 22.612131951250646 27.40133621519642 26.80733057695678 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 77.0 1 111.5 2 146.0 3 439.0 4 732.0 5 732.0 6 1002.0 7 1272.0 8 1138.5 9 1005.0 10 1327.5 11 1650.0 12 1650.0 13 2970.5 14 4291.0 15 6707.0 16 9123.0 17 8621.0 18 8119.0 19 8119.0 20 9507.5 21 10896.0 22 11408.5 23 11921.0 24 15481.5 25 19042.0 26 19042.0 27 24495.0 28 29948.0 29 35939.5 30 41931.0 31 50574.5 32 59218.0 33 59218.0 34 71004.0 35 82790.0 36 96435.5 37 110081.0 38 127928.0 39 145775.0 40 145775.0 41 165454.0 42 185133.0 43 207575.5 44 230018.0 45 257816.5 46 285615.0 47 285615.0 48 311903.5 49 338192.0 50 354208.5 51 370225.0 52 374070.0 53 377915.0 54 377915.0 55 355086.0 56 332257.0 57 307970.0 58 283683.0 59 260969.0 60 238255.0 61 238255.0 62 208334.0 63 178413.0 64 149958.5 65 121504.0 66 101209.5 67 80915.0 68 80915.0 69 66423.5 70 51932.0 71 42687.5 72 33443.0 73 27392.5 74 21342.0 75 21342.0 76 17356.5 77 13371.0 78 10740.5 79 8110.0 80 6418.5 81 4727.0 82 4727.0 83 3626.0 84 2525.0 85 1871.0 86 1217.0 87 892.5 88 568.0 89 568.0 90 358.0 91 148.0 92 99.0 93 50.0 94 34.0 95 18.0 96 18.0 97 14.0 98 10.0 99 7.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3697608.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.71517055818841 #Duplication Level Percentage of deduplicated Percentage of total 1 80.82389563729102 46.647649218834715 2 10.06271682595549 11.61542835777547 3 3.3248117259082326 5.756762275039752 4 1.6162826144423337 3.7313610705109586 5 0.9524264827751735 2.7484728448752316 6 0.6455414920645186 2.2354522390134672 7 0.4322127376932849 1.7461662311372639 8 0.3362336159704863 1.552462439450643 9 0.25514994514030015 1.3253420341516353 >10 1.4434817063092096 15.02058270798568 >50 0.07138646072063601 2.780887622484868 >100 0.03351532810165004 3.4566886384352116 >500 0.0017356164578088932 0.6753718178385643 >1k 6.098111699158468E-4 0.7073725024665822 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4316 0.11672410920789873 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 2.7044510937882004E-5 0.0 2.7044510937882004E-5 0.0 6 0.0 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.0 7 0.0 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.0 8 0.0 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 9 0.0 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 10 0.0 2.7044510937882004E-5 2.7044510937882004E-5 5.408902187576401E-5 2.7044510937882004E-5 11 0.0 2.7044510937882004E-5 2.7044510937882004E-5 8.113353281364601E-5 2.7044510937882004E-5 12 0.0 2.7044510937882004E-5 2.7044510937882004E-5 8.113353281364601E-5 8.113353281364601E-5 13 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 8.113353281364601E-5 1.0817804375152801E-4 14 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 1.3522255468941002E-4 1.8931157656517403E-4 15 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 1.3522255468941002E-4 2.1635608750305603E-4 16 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 1.3522255468941002E-4 2.7044510937882004E-4 17 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 1.6226706562729202E-4 2.7044510937882004E-4 18 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 1.8931157656517403E-4 2.9748962031670204E-4 19 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 3.5157864219246605E-4 2.9748962031670204E-4 20 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 4.3271217500611206E-4 3.5157864219246605E-4 21 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 7.302017953228141E-4 3.7862315313034805E-4 22 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.0012170029922046902 4.0566766406823006E-4 23 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.0015685816343971562 4.3271217500611206E-4 24 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.002406961473471498 4.5975668594399406E-4 25 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.0034076083781731325 4.8680119688187607E-4 26 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.0052195906110112265 4.8680119688187607E-4 27 2.7044510937882004E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.015334237701779095 4.8680119688187607E-4 28 5.408902187576401E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.05655007237111127 4.8680119688187607E-4 29 5.408902187576401E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.12567584232833767 4.8680119688187607E-4 30 5.408902187576401E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.2261732449735072 4.8680119688187607E-4 31 5.408902187576401E-5 2.7044510937882004E-5 2.7044510937882004E-5 0.6841179486846631 4.8680119688187607E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3085 0.0 21.34846 37 TACTTAC 985 0.0 16.340101 31 TCTTATA 5220 0.0 16.160921 37 ACGTATA 185 1.8189894E-11 16.0 29 TAATACG 310 0.0 15.5161295 27 CGCGGTA 320 0.0 14.453126 22 AGTGTAC 1235 0.0 14.380567 27 CTCGTTA 1030 0.0 14.368933 22 TCGTTAC 1010 0.0 14.10396 23 TAGATCG 120 3.30425E-5 13.875001 5 ACGGATG 1710 0.0 13.631579 28 GTACTTA 1215 0.0 13.55144 30 TACGGAT 1665 0.0 13.444445 27 GGGCGTC 1010 0.0 13.371286 11 ATACCGT 180 5.1688403E-8 13.361111 6 ACTTACA 965 0.0 13.227979 32 CGTTACG 815 0.0 12.93865 24 GTTACGG 1330 0.0 12.9360895 25 GGAGTGT 1640 0.0 12.8597555 6 AGGGCGT 1080 0.0 12.847222 10 >>END_MODULE