##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211936.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2755703 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31851835992485 33.0 31.0 34.0 31.0 34.0 2 32.468955834500306 34.0 31.0 34.0 31.0 34.0 3 32.53910708084289 34.0 31.0 34.0 31.0 34.0 4 36.077711204727066 37.0 35.0 37.0 35.0 37.0 5 35.92366303625609 37.0 35.0 37.0 35.0 37.0 6 35.928802559637234 37.0 35.0 37.0 35.0 37.0 7 35.91712568444422 37.0 35.0 37.0 35.0 37.0 8 35.88851701362592 37.0 35.0 37.0 35.0 37.0 9 37.70841088462726 39.0 37.0 39.0 35.0 39.0 10 37.55561539106355 39.0 37.0 39.0 35.0 39.0 11 37.65780383444805 39.0 37.0 39.0 35.0 39.0 12 37.59336655655562 39.0 37.0 39.0 35.0 39.0 13 37.655969456795596 39.0 37.0 39.0 35.0 39.0 14 38.98824510478814 40.0 38.0 41.0 36.0 41.0 15 38.93418049768063 40.0 38.0 41.0 36.0 41.0 16 38.89135585366057 40.0 38.0 41.0 36.0 41.0 17 38.87549746834111 40.0 38.0 41.0 36.0 41.0 18 38.84925697725771 40.0 38.0 41.0 36.0 41.0 19 38.86310607492897 40.0 38.0 41.0 35.0 41.0 20 38.81543838359939 40.0 38.0 41.0 35.0 41.0 21 38.804495985234986 40.0 38.0 41.0 35.0 41.0 22 38.7729160217919 40.0 38.0 41.0 35.0 41.0 23 38.71147870434513 40.0 38.0 41.0 35.0 41.0 24 38.68081393386733 40.0 38.0 41.0 35.0 41.0 25 38.62782128553041 40.0 38.0 41.0 35.0 41.0 26 38.523476586555226 40.0 38.0 41.0 34.0 41.0 27 38.4435086074225 40.0 38.0 41.0 34.0 41.0 28 38.37598972022747 40.0 38.0 41.0 34.0 41.0 29 38.314547685291195 40.0 38.0 41.0 34.0 41.0 30 38.267510323137145 40.0 38.0 41.0 34.0 41.0 31 38.22070448085298 40.0 38.0 41.0 34.0 41.0 32 38.16492053026034 40.0 38.0 41.0 34.0 41.0 33 38.128777302924156 40.0 38.0 41.0 34.0 41.0 34 38.075085377488065 40.0 38.0 41.0 33.0 41.0 35 38.029087314561835 40.0 38.0 41.0 33.0 41.0 36 37.972980034495734 40.0 38.0 41.0 33.0 41.0 37 37.95375481320011 40.0 38.0 41.0 33.0 41.0 38 37.913348789764356 40.0 37.0 41.0 33.0 41.0 39 37.865709403371845 40.0 37.0 41.0 33.0 41.0 40 37.82187557948008 40.0 37.0 41.0 33.0 41.0 41 37.747710475330614 40.0 37.0 41.0 33.0 41.0 42 37.671504512641604 40.0 37.0 41.0 33.0 41.0 43 36.712106493334005 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 2.0 15 4.0 16 8.0 17 27.0 18 58.0 19 139.0 20 255.0 21 500.0 22 1096.0 23 1885.0 24 3083.0 25 4811.0 26 7371.0 27 10567.0 28 14809.0 29 20968.0 30 28825.0 31 38141.0 32 50768.0 33 67930.0 34 93632.0 35 134500.0 36 206049.0 37 357231.0 38 816507.0 39 896533.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.91202644116583 16.85548116034275 12.478231507531836 27.754260890959586 2 18.906101274339072 19.11211041247914 35.216131781980856 26.765656531200932 3 20.28099544834839 20.708799170302463 29.099217150759713 29.910988230589435 4 15.91074945304338 14.568587398569438 32.540045135488114 36.98061801289907 5 16.656729698374605 34.47965909243485 33.0776574979234 15.785953711267142 6 37.84388230516859 32.554451622689385 14.301069454872314 15.300596617269713 7 31.404291391343698 29.22898440071372 19.636296073996363 19.73042813394622 8 28.048087910779934 34.44086681329592 18.428655047369038 19.08239022855511 9 28.40679855557729 13.964240703733314 17.185124812071546 40.44383592861785 10 17.340257640246428 25.657191649462952 32.013319287310715 24.989231422979906 11 38.735596688032054 20.13849097671266 19.777820759348884 21.348091575906402 12 22.92514831968467 22.897678015373934 28.726281460665394 25.450892204276006 13 32.46550880120245 18.36039660297209 22.67802444603065 26.49607014979481 14 23.63349751406447 18.596815404272522 23.678603971472977 34.09108311019003 15 27.15804279343601 25.501550783956034 20.74701083534764 26.59339558726031 16 26.245353726435688 24.55242818257265 22.79102646402751 26.411191626964154 17 25.992460000224987 24.137942296394062 23.402304239607822 26.467293463773128 18 26.08815246055181 24.2853819878267 23.842736318101043 25.783729233520447 19 27.514503558620067 23.825209030145846 23.54981650780218 25.110470903431903 20 26.5890046931763 23.3469644587969 23.544881288005275 26.519149560021525 21 26.177494454228196 24.011549865859998 24.06336967372754 25.747586006184264 22 27.14080581252769 23.218285860268686 22.936869466702326 26.704038860501296 23 26.29884279982277 23.562154557294456 23.727339266967448 26.411663375915328 24 26.017970731969303 23.28498390428867 23.73183902619404 26.965206337547986 25 26.57412645702385 22.910451525436525 23.538059072403666 26.97736294513596 26 26.075741834297816 23.363802267515766 24.013037689475244 26.54741820871117 27 26.881924503475158 23.758438409364143 23.37399930253732 25.98563778462338 28 26.287702266898865 24.255153766570636 22.934256703280433 26.522887263250066 29 26.322829419570976 24.16748103841379 23.556384704737773 25.953304837277457 30 27.045149640581734 23.619707929337814 23.075527369966938 26.259615060113518 31 26.323010861475275 23.395881196195674 23.706618601496604 26.574489340832447 32 25.841500335848966 23.758365832602422 23.681652195465187 26.718481636083425 33 26.00360053314889 23.18050965579382 23.807500300286353 27.008389510770936 34 26.36085964271186 23.251671170659538 24.54850903743981 25.83896014918879 35 26.201916534546722 23.05694771896681 24.175936231154083 26.56519951533238 36 25.72548638224076 22.627583596635777 24.93501658197563 26.711913439147832 37 25.2734057334916 22.35342487924134 25.325588425167734 27.047580962099328 38 25.632842145906142 21.79839409399344 25.45227116274867 27.116492597351748 39 24.74098260951924 21.958825025773823 26.577936737014113 26.722255627692824 40 25.54727414383916 21.428796934938198 26.69699891461453 26.326930006608112 41 24.449659487978202 21.725273006561302 27.161381324475098 26.663686180985398 42 23.82103586634699 21.92264551005678 27.524700593641622 26.731618029954607 43 23.409924799588346 21.506599223501226 27.330485179280934 27.752990797629494 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 29.0 2 29.0 3 65.0 4 101.0 5 101.0 6 134.0 7 167.0 8 157.0 9 147.0 10 212.0 11 277.0 12 277.0 13 491.0 14 705.0 15 1078.0 16 1451.0 17 1590.5 18 1730.0 19 1730.0 20 2284.5 21 2839.0 22 3588.0 23 4337.0 24 6011.0 25 7685.0 26 7685.0 27 10260.5 28 12836.0 29 16360.5 30 19885.0 31 25517.0 32 31149.0 33 31149.0 34 38853.0 35 46557.0 36 56656.5 37 66756.0 38 79774.0 39 92792.0 40 92792.0 41 108241.5 42 123691.0 43 142098.5 44 160506.0 45 183630.5 46 206755.0 47 206755.0 48 229082.0 49 251409.0 50 267898.5 51 284388.0 52 286507.5 53 288627.0 54 288627.0 55 277232.5 56 265838.0 57 250764.0 58 235690.0 59 219358.0 60 203026.0 61 203026.0 62 178430.5 63 153835.0 64 129641.5 65 105448.0 66 87339.0 67 69230.0 68 69230.0 69 56908.5 70 44587.0 71 36395.0 72 28203.0 73 23241.0 74 18279.0 75 18279.0 76 14766.0 77 11253.0 78 9290.5 79 7328.0 80 5759.0 81 4190.0 82 4190.0 83 3199.0 84 2208.0 85 1635.5 86 1063.0 87 772.0 88 481.0 89 481.0 90 311.0 91 141.0 92 92.0 93 43.0 94 25.5 95 8.0 96 8.0 97 6.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2755703.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.82451569553832 #Duplication Level Percentage of deduplicated Percentage of total 1 82.75577569174499 52.81847304534226 2 9.300382706984632 11.871848441129076 3 3.055687289336772 5.850832840767953 4 1.4403811431229463 3.6772651550723165 5 0.8714166573311493 2.7808873061592734 6 0.5389358765750689 2.063839278801251 7 0.37854486308176905 1.691230978865944 8 0.2828965362196822 1.4444587532933224 9 0.2078074504872875 1.1936888896748115 >10 1.102046216883152 12.216472898199553 >50 0.04709215679265346 2.041424280157521 >100 0.018293931151824414 2.0275495671731725 >500 6.257140899660351E-4 0.23576702409394754 >1k 1.1376619811858364E-4 0.08626154126960223 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0886514257886281E-4 2 0.0 0.0 0.0 0.0 1.0886514257886281E-4 3 0.0 0.0 0.0 0.0 1.0886514257886281E-4 4 0.0 0.0 0.0 0.0 1.0886514257886281E-4 5 0.0 0.0 0.0 0.0 1.0886514257886281E-4 6 3.6288380859620936E-5 0.0 0.0 0.0 1.0886514257886281E-4 7 3.6288380859620936E-5 0.0 0.0 0.0 1.4515352343848374E-4 8 3.6288380859620936E-5 0.0 0.0 0.0 1.4515352343848374E-4 9 3.6288380859620936E-5 0.0 0.0 0.0 1.814419042981047E-4 10 3.6288380859620936E-5 0.0 0.0 0.0 1.814419042981047E-4 11 3.6288380859620936E-5 0.0 0.0 0.0 1.814419042981047E-4 12 3.6288380859620936E-5 0.0 0.0 0.0 1.814419042981047E-4 13 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.0 1.814419042981047E-4 14 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.0 2.903070468769675E-4 15 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.0 3.991721894558303E-4 16 3.6288380859620936E-5 3.6288380859620936E-5 0.0 3.6288380859620936E-5 5.080373320346932E-4 17 3.6288380859620936E-5 3.6288380859620936E-5 0.0 1.0886514257886281E-4 5.080373320346932E-4 18 3.6288380859620936E-5 3.6288380859620936E-5 0.0 1.0886514257886281E-4 5.80614093753935E-4 19 3.6288380859620936E-5 3.6288380859620936E-5 0.0 2.540186660173466E-4 5.80614093753935E-4 20 3.6288380859620936E-5 3.6288380859620936E-5 0.0 2.903070468769675E-4 6.169024746135559E-4 21 3.6288380859620936E-5 3.6288380859620936E-5 0.0 3.991721894558303E-4 6.531908554731769E-4 22 3.6288380859620936E-5 3.6288380859620936E-5 0.0 6.894792363327978E-4 6.531908554731769E-4 23 3.6288380859620936E-5 3.6288380859620936E-5 0.0 8.709211406309025E-4 7.257676171924188E-4 24 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.001705553900402184 7.257676171924188E-4 25 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.0021773028515772565 7.257676171924188E-4 26 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.003556261324242852 7.257676171924188E-4 27 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.015422561865338899 7.257676171924188E-4 28 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.059367791086339855 7.257676171924188E-4 29 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.13074703623721423 7.257676171924188E-4 30 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.22970545084140054 7.257676171924188E-4 31 3.6288380859620936E-5 3.6288380859620936E-5 0.0 0.701236671731315 7.257676171924188E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2070 0.0 23.236715 37 TATACCG 110 3.857349E-8 18.5 5 TCTTATA 3690 0.0 16.39431 37 TACTTAC 645 0.0 16.062017 31 TCTATAC 250 0.0 15.540001 3 GGTATCA 1920 0.0 14.934896 1 GGACCGT 305 0.0 14.557377 6 ATCTATA 180 3.3360266E-9 14.388888 2 GTATAGA 275 0.0 14.127272 1 GTACTTA 800 0.0 13.875001 30 CTCTTAT 6020 0.0 13.798172 37 CGCGAAT 95 0.001245847 13.6315775 28 GTATACG 150 1.3072804E-6 13.566667 1 TAATCGA 170 3.7365862E-7 13.058823 20 ATTACGG 555 0.0 12.666667 25 TACGGAT 1015 0.0 12.576355 27 GTTTAAG 325 0.0 12.523078 1 AGGGCGT 725 0.0 12.5034485 10 GTCTTAG 415 0.0 12.481928 1 AGTGTAC 905 0.0 12.469613 27 >>END_MODULE