##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211935.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2538597 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55703800169936 34.0 31.0 34.0 31.0 34.0 2 32.68618453421319 34.0 31.0 34.0 31.0 34.0 3 32.761519453461894 34.0 31.0 34.0 31.0 34.0 4 36.22255245712494 37.0 37.0 37.0 35.0 37.0 5 36.12833387891028 37.0 35.0 37.0 35.0 37.0 6 36.14544135993228 37.0 36.0 37.0 35.0 37.0 7 36.12675426623446 37.0 36.0 37.0 35.0 37.0 8 36.10969169190699 37.0 35.0 37.0 35.0 37.0 9 37.961549627609266 39.0 38.0 39.0 35.0 39.0 10 37.841878407640124 39.0 38.0 39.0 35.0 39.0 11 37.94014922415807 39.0 38.0 39.0 35.0 39.0 12 37.87848721163698 39.0 38.0 39.0 35.0 39.0 13 37.931297090479504 39.0 38.0 39.0 35.0 39.0 14 39.3271834796937 40.0 39.0 41.0 36.0 41.0 15 39.296452725659094 40.0 39.0 41.0 36.0 41.0 16 39.25239413739164 40.0 39.0 41.0 36.0 41.0 17 39.24304015170584 40.0 39.0 41.0 36.0 41.0 18 39.224169098127824 40.0 39.0 41.0 36.0 41.0 19 39.2353938021671 40.0 39.0 41.0 36.0 41.0 20 39.19204150954248 40.0 39.0 41.0 36.0 41.0 21 39.1828683323899 40.0 39.0 41.0 36.0 41.0 22 39.1601522415728 40.0 39.0 41.0 36.0 41.0 23 39.10200161742884 40.0 39.0 41.0 36.0 41.0 24 39.07551257643494 40.0 39.0 41.0 36.0 41.0 25 39.023752490056516 40.0 39.0 41.0 36.0 41.0 26 38.937092811501785 40.0 38.0 41.0 35.0 41.0 27 38.85943456168899 40.0 38.0 41.0 35.0 41.0 28 38.79605861032689 40.0 38.0 41.0 35.0 41.0 29 38.739734979596996 40.0 38.0 41.0 35.0 41.0 30 38.697407268660605 40.0 38.0 41.0 35.0 41.0 31 38.64881389208291 40.0 38.0 41.0 35.0 41.0 32 38.5965980421469 40.0 38.0 41.0 35.0 41.0 33 38.56605203582924 40.0 38.0 41.0 35.0 41.0 34 38.5162182102949 40.0 38.0 41.0 34.0 41.0 35 38.47705208822038 40.0 38.0 41.0 34.0 41.0 36 38.40705358117102 40.0 38.0 41.0 34.0 41.0 37 38.393816742082336 40.0 38.0 41.0 34.0 41.0 38 38.35051211358085 40.0 38.0 41.0 34.0 41.0 39 38.30652876372264 40.0 38.0 41.0 34.0 41.0 40 38.27053565414282 40.0 38.0 41.0 34.0 41.0 41 38.19640927646255 40.0 38.0 41.0 34.0 41.0 42 38.12270281576792 40.0 38.0 41.0 34.0 41.0 43 37.19896620062184 39.0 36.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 0.0 13 0.0 14 2.0 15 1.0 16 3.0 17 16.0 18 36.0 19 65.0 20 167.0 21 357.0 22 695.0 23 1234.0 24 2252.0 25 3559.0 26 5210.0 27 7578.0 28 10913.0 29 15286.0 30 21189.0 31 28570.0 32 38066.0 33 51045.0 34 72058.0 35 102388.0 36 155417.0 37 260972.0 38 624449.0 39 1137067.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.83515658452287 16.76532352319017 12.611217928643262 27.788301963643697 2 18.654437864694554 19.090938813840875 35.77507576035109 26.47954756111348 3 20.126707783866443 20.6406136933117 29.40801552983794 29.824662992983917 4 15.830988534217916 14.511558943778788 32.65425745007971 37.003195071923585 5 16.57754263477031 34.4650608190272 33.12408389358374 15.83331265261875 6 37.35354607288987 32.46702804738208 14.530230674660057 15.649195205067995 7 30.961787160388198 29.564952609650135 19.718687133089656 19.754573096872015 8 27.53678508246878 34.645790568569964 18.766507641819477 19.05091670714178 9 28.512717851632218 14.066470574100576 17.4531837861622 39.967627788105005 10 17.441287451296915 25.739059803505636 32.039035735093044 24.7806170101044 11 38.2718091922428 20.351123080977406 19.924824617692373 21.45224310908742 12 22.58483721520194 23.02653788687216 28.876343901769363 25.512280996156537 13 32.269871901684276 18.660425423964497 22.707582180235775 26.362120494115448 14 23.508024314217657 18.920135807298283 23.91998414872467 33.65185572975939 15 27.162286885236213 25.63211096523001 20.908202444105935 26.297399705427843 16 25.766791656966426 24.80819129621598 23.26663113522942 26.158385911588173 17 25.73508122793811 24.229840340944232 23.66984598185533 26.365232449262326 18 25.78672392664137 24.588266668557473 24.110246722894576 25.514762681906582 19 27.2824713808454 24.035520407532193 23.91805394869686 24.763954262925544 20 26.416087311219545 23.432116243736207 23.81078997572281 26.34100646932144 21 25.920577389794442 24.238821679849146 24.48088452007152 25.359716410284893 22 26.96784877631227 23.334030568853585 23.141680227306658 26.556440427527487 23 25.96505077410869 23.762850109725964 24.042295803548182 26.229803312617168 24 25.643377030698456 23.27900017214233 24.23125844708711 26.846364350072104 25 26.314889681190046 23.113554455472844 23.755680795336954 26.81587506800016 26 25.75497410577575 23.496482505888096 24.392725588189066 26.35581780014709 27 26.704711303133188 23.877756099136647 23.710577141625865 25.706955456104296 28 25.861568417515656 24.668822975840595 23.05974520571796 26.409863400925786 29 25.90679024673865 24.42329365393562 24.023978599202632 25.6459375001231 30 26.947483196427 23.734842513404057 23.312522625686547 26.00515166448239 31 26.10607355165077 23.518778285801172 24.04804701179431 26.327101150753744 32 25.52681658412107 23.815753347222895 24.030320685008295 26.627109383647742 33 25.63707433673009 23.12781430057626 24.205299226304923 27.02981213638872 34 26.082477841106723 23.350338789496718 25.081019161371422 25.48616420802514 35 25.94968795756081 22.987067265895295 24.545565916921827 26.51767885962207 36 25.410610664079407 22.525276757200928 25.58417109923316 26.479941479486502 37 24.85790379489143 22.234958916283283 25.975765353854907 26.93137193497038 38 25.282311449985954 21.607368164383715 26.08436864929723 27.0259517363331 39 24.15093849082781 21.87117529879693 27.479627526543204 26.498258683832056 40 25.20002190186154 21.29814224156099 27.365706333065077 26.1361295235124 41 23.941689051078214 21.7606418033268 27.825448466219726 26.472220679375262 42 23.34320886694501 21.962603753175475 28.194865116440305 26.49932226343921 43 22.77990559352272 21.687530553293808 27.734886632261833 27.797677220921635 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 50.0 2 59.0 3 145.5 4 232.0 5 232.0 6 281.5 7 331.0 8 313.5 9 296.0 10 418.5 11 541.0 12 541.0 13 911.0 14 1281.0 15 1982.5 16 2684.0 17 2677.5 18 2671.0 19 2671.0 20 3313.0 21 3955.0 22 4639.0 23 5323.0 24 7225.5 25 9128.0 26 9128.0 27 11972.0 28 14816.0 29 18253.0 30 21690.0 31 27148.5 32 32607.0 33 32607.0 34 40010.5 35 47414.0 36 56427.5 37 65441.0 38 77331.5 39 89222.0 40 89222.0 41 103004.0 42 116786.0 43 132919.0 44 149052.0 45 170863.0 46 192674.0 47 192674.0 48 214277.0 49 235880.0 50 250412.5 51 264945.0 52 265408.0 53 265871.0 54 265871.0 55 251823.0 56 237775.0 57 222421.5 58 207068.0 59 191280.5 60 175493.0 61 175493.0 62 154282.0 63 133071.0 64 112430.0 65 91789.0 66 76606.0 67 61423.0 68 61423.0 69 50707.0 70 39991.0 71 33206.0 72 26421.0 73 21886.5 74 17352.0 75 17352.0 76 14165.5 77 10979.0 78 8867.5 79 6756.0 80 5275.5 81 3795.0 82 3795.0 83 2918.0 84 2041.0 85 1552.5 86 1064.0 87 757.5 88 451.0 89 451.0 90 290.5 91 130.0 92 85.0 93 40.0 94 26.5 95 13.0 96 13.0 97 8.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2538597.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.75175307914448 #Duplication Level Percentage of deduplicated Percentage of total 1 82.83806811374562 52.81072063940863 2 9.256207182459939 11.801988694911794 3 3.052650141980868 5.838353942657389 4 1.4379435985941418 3.666857009572407 5 0.8285356167495879 2.6410299028148203 6 0.5496640688107193 2.1025228794779314 7 0.3763465497510976 1.6794926618343957 8 0.27601992758312743 1.4077403414562306 9 0.21792096232265373 1.2503559042687031 >10 1.0954487258756136 11.953540181055168 >50 0.04959691112702327 2.14324520394125 >100 0.02073184681111263 2.2752003754340575 >500 6.807068624792732E-4 0.2903209514082583 >1k 1.8564732612741052E-4 0.1386313117590146 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.93918373022579E-5 0.0 2 0.0 0.0 0.0 3.93918373022579E-5 0.0 3 0.0 0.0 0.0 3.93918373022579E-5 0.0 4 0.0 0.0 0.0 7.87836746045158E-5 0.0 5 0.0 0.0 0.0 7.87836746045158E-5 0.0 6 0.0 0.0 0.0 7.87836746045158E-5 0.0 7 0.0 0.0 0.0 7.87836746045158E-5 0.0 8 0.0 0.0 0.0 7.87836746045158E-5 0.0 9 0.0 0.0 0.0 7.87836746045158E-5 0.0 10 0.0 0.0 0.0 1.181755119067737E-4 0.0 11 0.0 0.0 0.0 1.181755119067737E-4 0.0 12 0.0 0.0 0.0 1.181755119067737E-4 3.93918373022579E-5 13 0.0 0.0 0.0 1.181755119067737E-4 1.181755119067737E-4 14 0.0 0.0 0.0 1.181755119067737E-4 1.575673492090316E-4 15 0.0 0.0 0.0 1.181755119067737E-4 2.363510238135474E-4 16 0.0 0.0 0.0 1.575673492090316E-4 3.545265357203211E-4 17 0.0 0.0 0.0 1.575673492090316E-4 3.545265357203211E-4 18 0.0 0.0 0.0 1.969591865112895E-4 4.3331021032483693E-4 19 0.0 0.0 0.0 1.969591865112895E-4 4.3331021032483693E-4 20 0.0 0.0 0.0 3.151346984180632E-4 4.3331021032483693E-4 21 0.0 0.0 0.0 6.696612341383844E-4 4.3331021032483693E-4 22 0.0 0.0 0.0 0.0011029714444632211 4.3331021032483693E-4 23 0.0 0.0 0.0 0.001575673492090316 6.696612341383844E-4 24 0.0 0.0 0.0 0.002363510238135474 6.696612341383844E-4 25 0.0 0.0 0.0 0.003269522496087406 6.696612341383844E-4 26 0.0 0.0 0.0 0.0055936408969206215 6.696612341383844E-4 27 0.0 0.0 0.0 0.021980645214659908 6.696612341383844E-4 28 0.0 0.0 0.0 0.08098961749344225 6.696612341383844E-4 29 0.0 0.0 0.0 0.17269381473309864 6.696612341383844E-4 30 0.0 0.0 0.0 0.3014657308741797 6.696612341383844E-4 31 0.0 0.0 0.0 0.8822195882213679 7.090530714406422E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2680 0.0 23.125 37 GTAACGT 145 7.2759576E-12 19.137932 26 ATTACGC 60 9.241009E-4 18.5 3 TACTTAC 720 0.0 17.472221 31 GTATTAG 195 0.0 17.076923 1 GGTATCA 2280 0.0 15.90351 1 GTACTTA 840 0.0 15.416668 30 TCTTATA 4625 0.0 15.4 37 TAACGTC 195 4.1836756E-11 15.179487 27 GTATTAA 360 0.0 14.902778 1 TATACAC 720 0.0 14.902778 37 CGTTACG 665 0.0 14.466166 24 TACGGAT 1345 0.0 14.442379 27 CTCGTTA 910 0.0 14.23077 22 TAGACCG 105 1.6568751E-4 14.095239 5 TAAGGCG 145 8.921397E-7 14.034484 5 ACGGATG 1440 0.0 13.875 28 AGTGTAC 1060 0.0 13.613208 27 TCGTTAC 815 0.0 13.392637 23 GTTACGG 1240 0.0 13.278225 25 >>END_MODULE