##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211933.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8455762 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61345009474013 34.0 31.0 34.0 31.0 34.0 2 32.740318968296414 34.0 31.0 34.0 31.0 34.0 3 32.81959496967866 34.0 31.0 34.0 31.0 34.0 4 36.262644573014235 37.0 37.0 37.0 35.0 37.0 5 36.174335914374126 37.0 35.0 37.0 35.0 37.0 6 36.1886656696345 37.0 37.0 37.0 35.0 37.0 7 36.17655487465234 37.0 36.0 37.0 35.0 37.0 8 36.157810969608654 37.0 36.0 37.0 35.0 37.0 9 38.00893154277521 39.0 38.0 39.0 35.0 39.0 10 37.89598004295769 39.0 38.0 39.0 35.0 39.0 11 37.9849028390345 39.0 38.0 39.0 35.0 39.0 12 37.931118212646005 39.0 38.0 39.0 35.0 39.0 13 37.97778603513202 39.0 38.0 39.0 35.0 39.0 14 39.39979803121233 40.0 39.0 41.0 37.0 41.0 15 39.374263135599136 40.0 39.0 41.0 36.0 41.0 16 39.33657794531114 40.0 39.0 41.0 36.0 41.0 17 39.32927759792672 40.0 39.0 41.0 36.0 41.0 18 39.31321943545715 40.0 39.0 41.0 36.0 41.0 19 39.3323756037599 40.0 39.0 41.0 36.0 41.0 20 39.288033414374716 40.0 39.0 41.0 36.0 41.0 21 39.28129445932844 40.0 39.0 41.0 36.0 41.0 22 39.26141227721405 40.0 39.0 41.0 36.0 41.0 23 39.20536174031388 40.0 39.0 41.0 36.0 41.0 24 39.185729328711005 40.0 39.0 41.0 36.0 41.0 25 39.13499398398394 40.0 39.0 41.0 36.0 41.0 26 39.05697345786223 40.0 39.0 41.0 36.0 41.0 27 38.985603899447504 40.0 39.0 41.0 35.0 41.0 28 38.927411509453556 40.0 39.0 41.0 35.0 41.0 29 38.87368778827975 40.0 38.0 41.0 35.0 41.0 30 38.83961374504155 40.0 38.0 41.0 35.0 41.0 31 38.79035005952154 40.0 38.0 41.0 35.0 41.0 32 38.737756573564866 40.0 38.0 41.0 35.0 41.0 33 38.70789208589362 40.0 38.0 41.0 35.0 41.0 34 38.66746261306787 40.0 38.0 41.0 35.0 41.0 35 38.63208531649779 40.0 38.0 41.0 35.0 41.0 36 38.56646958606451 40.0 38.0 41.0 35.0 41.0 37 38.555957227746006 40.0 38.0 41.0 35.0 41.0 38 38.517654588669835 40.0 38.0 41.0 35.0 41.0 39 38.46915830885496 40.0 38.0 41.0 34.0 41.0 40 38.435838662441064 40.0 38.0 41.0 34.0 41.0 41 38.36312765188992 40.0 38.0 41.0 34.0 41.0 42 38.29710013124778 40.0 38.0 41.0 34.0 41.0 43 37.40566704692019 39.0 37.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 1.0 13 6.0 14 2.0 15 7.0 16 17.0 17 43.0 18 85.0 19 191.0 20 445.0 21 952.0 22 1876.0 23 3812.0 24 6490.0 25 10502.0 26 15766.0 27 23040.0 28 34027.0 29 47053.0 30 65154.0 31 88322.0 32 117355.0 33 157882.0 34 222050.0 35 317737.0 36 478720.0 37 815289.0 38 2007109.0 39 4041823.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.94012769044351 16.838612534269533 12.494332267156999 27.72692750812996 2 17.687099045597545 19.15852172755099 37.22719489976185 25.927184327089627 3 19.55726757683104 21.372562283564744 29.717771148241873 29.35239899136234 4 15.023814530257592 14.639520364929856 33.86074489797608 36.47592020683648 5 15.748125361144272 35.4900007828981 33.6887438411819 15.073130014775723 6 36.47105961591634 33.52897113234739 15.04298489006668 14.956984361669592 7 30.355596574264982 30.411984159440625 20.33790686161697 18.894512404677428 8 27.120252438514708 36.01476720844319 18.919796938466337 17.945183414575766 9 28.522763530950847 14.488227081131186 17.5843525397238 39.404656848194165 10 16.62959529844856 26.476691278680736 32.636242600016416 24.257470822854284 11 37.76181259595528 21.01718331239692 20.425929679666954 20.79507441198085 12 22.08722289014284 23.315781593663587 29.836010048532586 24.760985467660987 13 31.47311856696061 19.182209716877082 23.543271440232118 25.801400275930185 14 22.85708845636857 19.145843981890692 24.670999491234497 33.326068070506246 15 26.348163536296315 26.343634080524026 21.54032954096863 25.767872842211027 16 25.093847248775454 25.59913583187417 23.798777685559266 25.508239233791112 17 25.032504462637426 25.027525609164496 24.153506212686686 25.78646371551139 18 25.028436230821065 25.553072567558075 24.77544897786858 24.643042223752275 19 26.790276263688597 24.750188096590232 24.347054706601252 24.112480933119926 20 25.50827471255695 24.159052726413066 24.47505026749807 25.85762229353191 21 25.062436714751435 24.929379516594718 25.383389456798806 24.62479431185504 22 26.081481479729447 23.771518167138574 23.866033599337353 26.280966753794633 23 25.120349886858218 24.40626876678885 25.095928669704755 25.377452676648183 24 24.796062140821846 23.865040193893822 25.106726040775506 26.232171624508826 25 25.56818652180608 23.86673134839888 24.535565215766482 26.029516914028566 26 25.065345973550347 24.12681435451944 25.175909634164256 25.631930037765965 27 25.915239809256697 24.69537340336684 24.363883467864873 25.025503319511593 28 25.148413590637958 25.462057706922213 23.593734071512422 25.79579463092741 29 25.22364040047485 25.276113495152774 24.588085615465523 24.912160488906853 30 26.609251774115684 24.344228231589298 23.818775883237965 25.227744111057053 31 25.562498093016334 24.310440620253974 24.69270066967353 25.434360617056157 32 24.997711619603297 24.75870300039192 24.551601617926334 25.69198376207845 33 24.9778316844774 23.88648119471669 24.733205594007966 26.40248152679794 34 25.489258094066507 24.175798703889726 25.55749558703284 24.777447615010924 35 25.371776074113722 23.85405360273858 24.90504108322822 25.869129239919474 36 24.980196935533428 23.62169133899464 25.716771593145598 25.681340132326337 37 24.39611001350322 23.510110620426637 26.193334202168888 25.900445163901253 38 25.299754179457747 22.829131188886347 25.785304742493935 26.085809889161972 39 23.8854050054862 23.337707470952942 27.140309767469805 25.636577756091057 40 25.248629277881758 22.515238721241207 26.90311056531629 25.33302143556074 41 23.986933407066093 23.124905833442334 27.159160818386326 25.728999941105247 42 23.70611897543947 23.235564104098483 27.470546119912083 25.58777080054997 43 23.086032932336554 22.879759387740574 26.941403979913343 27.092803700009533 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 185.0 1 243.0 2 301.0 3 716.0 4 1131.0 5 1131.0 6 1417.5 7 1704.0 8 1605.0 9 1506.0 10 2084.5 11 2663.0 12 2663.0 13 4367.0 14 6071.0 15 9299.0 16 12527.0 17 12988.5 18 13450.0 19 13450.0 20 17135.5 21 20821.0 22 24357.5 23 27894.0 24 36890.0 25 45886.0 26 45886.0 27 58118.0 28 70350.0 29 84644.5 30 98939.0 31 120316.5 32 141694.0 33 141694.0 34 169084.5 35 196475.0 36 229398.0 37 262321.0 38 302258.5 39 342196.0 40 342196.0 41 387674.5 42 433153.0 43 484605.5 44 536058.0 45 603433.5 46 670809.0 47 670809.0 48 732007.5 49 793206.0 50 835182.0 51 877158.0 52 868920.5 53 860683.0 54 860683.0 55 806010.0 56 751337.0 57 695727.0 58 640117.0 59 589322.0 60 538527.0 61 538527.0 62 468855.5 63 399184.0 64 333376.0 65 267568.0 66 220107.0 67 172646.0 68 172646.0 69 140046.0 70 107446.0 71 87085.5 72 66725.0 73 53894.5 74 41064.0 75 41064.0 76 32693.0 77 24322.0 78 19459.0 79 14596.0 80 11267.0 81 7938.0 82 7938.0 83 5982.5 84 4027.0 85 3005.5 86 1984.0 87 1377.0 88 770.0 89 770.0 90 496.0 91 222.0 92 142.5 93 63.0 94 46.5 95 30.0 96 30.0 97 20.5 98 11.0 99 7.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8455762.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.861381864497865 #Duplication Level Percentage of deduplicated Percentage of total 1 77.14140042441483 38.46376824123885 2 11.557202663455188 11.525161905758619 3 3.989209546572914 5.967225016175174 4 2.0240497173776433 4.036876634835827 5 1.1416062119666737 2.84610316368766 6 0.7846742867792146 2.3474966551410557 7 0.555170373703961 1.9377093402176433 8 0.4022234987344041 1.60443355722164 9 0.3188484949064131 1.430840390530416 >10 1.8780568080564493 17.484708564925878 >50 0.14510579114030753 4.925367906010304 >100 0.05819004416655993 5.179900155344699 >500 0.0028576502098773457 0.9602115445996219 >1k 0.0013806836306925066 1.2307310063178858 >5k 2.380488519505279E-5 0.05946591799464806 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.3652510560254654E-5 7.095753168076396E-5 2 0.0 0.0 0.0 2.3652510560254654E-5 7.095753168076396E-5 3 0.0 0.0 0.0 2.3652510560254654E-5 7.095753168076396E-5 4 0.0 0.0 0.0 2.3652510560254654E-5 8.278378696089128E-5 5 0.0 0.0 0.0 2.3652510560254654E-5 8.278378696089128E-5 6 0.0 0.0 0.0 2.3652510560254654E-5 1.0643629752114594E-4 7 0.0 0.0 0.0 2.3652510560254654E-5 1.0643629752114594E-4 8 0.0 0.0 0.0 2.3652510560254654E-5 1.300888080814006E-4 9 0.0 0.0 0.0 2.3652510560254654E-5 1.419150633615279E-4 10 0.0 0.0 0.0 8.278378696089128E-5 1.419150633615279E-4 11 0.0 0.0 0.0 1.1826255280127326E-4 1.419150633615279E-4 12 0.0 0.0 0.0 1.5374131864165523E-4 2.4835136088267385E-4 13 0.0 0.0 0.0 1.5374131864165523E-4 2.601776161628012E-4 14 0.0 0.0 0.0 1.7739382920190988E-4 3.193088925634378E-4 15 0.0 1.1826255280127327E-5 0.0 1.7739382920190988E-4 4.020926795243291E-4 16 0.0 1.1826255280127327E-5 0.0 2.246988503224192E-4 4.1391893480445643E-4 17 0.0 1.1826255280127327E-5 0.0 2.9565638200318314E-4 4.2574519008458376E-4 18 0.0 1.1826255280127327E-5 0.0 2.9565638200318314E-4 4.967027217653477E-4 19 0.0 1.1826255280127327E-5 0.0 3.5478765840381976E-4 5.085289770454751E-4 20 0.0 1.1826255280127327E-5 0.0 4.848764664852204E-4 5.79486508726239E-4 21 0.0 1.1826255280127327E-5 0.0 6.031390192864937E-4 6.149652745666209E-4 22 0.0 1.1826255280127327E-5 0.0 8.160116143287855E-4 6.267915298467483E-4 23 0.0 1.1826255280127327E-5 0.0 0.001052536719931332 6.386177851268756E-4 24 0.0 1.1826255280127327E-5 0.0 0.0016438494839376983 6.386177851268756E-4 25 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.00221150973738381 6.386177851268756E-4 26 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.003512397818197816 6.622702956871302E-4 27 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.0138485449330291 6.622702956871302E-4 28 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.054164249182983154 6.622702956871302E-4 29 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.1176712400372669 6.622702956871302E-4 30 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.20259557920386123 6.622702956871302E-4 31 1.1826255280127327E-5 1.1826255280127327E-5 0.0 0.643572986089249 6.622702956871302E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 6125 0.0 20.961632 37 TACTTAC 3090 0.0 17.781553 31 TCTTATA 10925 0.0 16.916704 37 GTACTTA 3605 0.0 16.011095 30 GGTATCA 6125 0.0 15.645714 1 TACGGAT 4630 0.0 15.143628 27 CTCGTTA 3390 0.0 14.516225 22 CGTTACG 2465 0.0 14.409736 24 TCGTTAC 3150 0.0 14.212698 23 TATACCG 365 0.0 14.191781 5 ACTTACA 2805 0.0 14.180035 32 AGTGTAC 4400 0.0 14.085227 27 ACGGATG 5050 0.0 13.994059 28 GTGTACT 4300 0.0 13.767443 28 CGGATGG 5305 0.0 13.704996 29 ATGGTTG 10675 0.0 13.500234 32 GATGGTT 11195 0.0 13.352389 31 GTTACGG 3875 0.0 13.272258 25 CTCTTAT 17445 0.0 13.118086 37 GATCTCG 4080 0.0 12.922794 19 >>END_MODULE