FastQCFastQC Report
Thu 9 Feb 2017
SRR3211929.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3211929.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7458046
Sequences flagged as poor quality0
Sequence length43
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTATAC58350.021.1156837
GGTATCA41150.016.6342641
TCTTATA103200.016.49224937
TATACCG2900.015.94827655
CTCGTTA13500.014.52592622
TACTTAC13300.014.46616631
TCGTTAC14350.013.79442523
GTATTAG6100.013.6475411
CTAGACA9500.013.4368424
ATACCGC4000.013.41256
CGTTACG11000.012.78181724
CTCTTAT159350.012.677752537
TACGGAT21800.012.47477127
TCTATAC7550.012.0066233
TAATACT8900.011.8483154
TTATACT10800.011.6481494
GTATAAA9850.011.64467051
GTATCAA59250.011.5215192
GTACTTA16850.011.41839730
ACGGATG25150.011.328032528
Produced by FastQC (version 0.11.5)