##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211928.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2057194 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.484219767314116 34.0 31.0 34.0 31.0 34.0 2 32.61802630184611 34.0 31.0 34.0 31.0 34.0 3 32.69798327236031 34.0 31.0 34.0 31.0 34.0 4 36.17585847518513 37.0 35.0 37.0 35.0 37.0 5 36.06905863034794 37.0 35.0 37.0 35.0 37.0 6 36.0884447456098 37.0 35.0 37.0 35.0 37.0 7 36.074122810002365 37.0 35.0 37.0 35.0 37.0 8 36.05036763669348 37.0 35.0 37.0 35.0 37.0 9 37.896474032103924 39.0 38.0 39.0 35.0 39.0 10 37.77425609835533 39.0 37.0 39.0 35.0 39.0 11 37.8735155750989 39.0 38.0 39.0 35.0 39.0 12 37.80745180085106 39.0 38.0 39.0 35.0 39.0 13 37.863832482498005 39.0 38.0 39.0 35.0 39.0 14 39.23315593959539 40.0 39.0 41.0 36.0 41.0 15 39.19805521501618 40.0 39.0 41.0 36.0 41.0 16 39.156749922467206 40.0 39.0 41.0 36.0 41.0 17 39.134127845988274 40.0 39.0 41.0 36.0 41.0 18 39.127075521316904 40.0 39.0 41.0 36.0 41.0 19 39.12831312943748 40.0 39.0 41.0 36.0 41.0 20 39.09451709464445 40.0 39.0 41.0 36.0 41.0 21 39.0798082242122 40.0 39.0 41.0 36.0 41.0 22 39.05243064096045 40.0 39.0 41.0 36.0 41.0 23 38.99045787611669 40.0 39.0 41.0 36.0 41.0 24 38.95792375439555 40.0 38.0 41.0 35.0 41.0 25 38.90787110987102 40.0 38.0 41.0 35.0 41.0 26 38.81141059132002 40.0 38.0 41.0 35.0 41.0 27 38.72555043423226 40.0 38.0 41.0 35.0 41.0 28 38.669891123540125 40.0 38.0 41.0 35.0 41.0 29 38.60860667491739 40.0 38.0 41.0 35.0 41.0 30 38.54924863673528 40.0 38.0 41.0 34.0 41.0 31 38.50551090465945 40.0 38.0 41.0 34.0 41.0 32 38.45705752593095 40.0 38.0 41.0 34.0 41.0 33 38.420099416972825 40.0 38.0 41.0 34.0 41.0 34 38.36930012434413 40.0 38.0 41.0 34.0 41.0 35 38.316498103727696 40.0 38.0 41.0 34.0 41.0 36 38.2534204357975 40.0 38.0 41.0 34.0 41.0 37 38.232681506945866 40.0 38.0 41.0 34.0 41.0 38 38.1783191084555 40.0 38.0 41.0 34.0 41.0 39 38.140267762787566 40.0 38.0 41.0 34.0 41.0 40 38.09326247305796 40.0 38.0 41.0 33.0 41.0 41 38.01718457277243 40.0 38.0 41.0 33.0 41.0 42 37.932545010339325 40.0 37.0 41.0 33.0 41.0 43 36.97569650698962 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 0.0 15 4.0 16 4.0 17 12.0 18 36.0 19 64.0 20 144.0 21 311.0 22 666.0 23 1179.0 24 1921.0 25 3079.0 26 4740.0 27 6881.0 28 9911.0 29 13549.0 30 18648.0 31 24713.0 32 33276.0 33 44525.0 34 61918.0 35 88033.0 36 133551.0 37 228531.0 38 534125.0 39 847372.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.303256766255394 16.59289303779809 12.438642150424316 27.6652080455222 2 18.721229013889793 18.95747314059831 35.322628784645495 26.998669060866405 3 20.447512485453487 20.571710786634608 28.798013216060326 30.18276351185158 4 15.594397028184995 14.336372748510836 32.67285438320353 37.396375840100646 5 16.859664183348773 34.046521621198586 32.96295828200938 16.130855913443263 6 37.683660364554825 32.437290795131624 14.35746944624571 15.521579394067842 7 31.454593003868375 28.856393709100843 19.64457411406022 20.04443917297056 8 28.013352168050265 34.02362635706695 18.686861812741046 19.276159662141733 9 27.899750825639195 14.203473274761642 17.26351525427354 40.63326064532563 10 17.665810808314628 25.34442546497802 31.981670177921966 25.008093548785382 11 38.46132158658833 20.002537436916498 19.805618721423453 21.730522255071712 12 22.927929986185067 23.03088575992347 28.73642446944722 25.304759784444247 13 32.80939959964884 18.18462429892368 22.597820137527137 26.40815596390034 14 23.571379267098777 18.56008718672133 23.997445063518562 33.871088482661335 15 27.372576431780377 25.162527209392987 20.833523722118574 26.63137263670806 16 26.287554795512726 24.110657526708714 23.002497576796355 26.59929010098221 17 25.903731004465307 24.123101661778133 23.772770093632396 26.20039724012417 18 26.224750801334245 23.749048461156313 24.073179291792606 25.953021445716836 19 27.15174164420079 23.82842843212648 23.84699741492538 25.17283250874735 20 26.789792309330085 23.22756142590344 23.607107545520744 26.37553871924573 21 26.208272044347787 23.996424255563646 23.836935165084093 25.958368535004478 22 26.8725749734833 23.479992650182723 23.02850387469534 26.61892850163864 23 26.340102100239456 23.33406572253273 23.544789650368415 26.7810425268594 24 26.266215048264772 23.28603913874919 23.632190255270043 26.815555557715996 25 26.713328932516816 22.97478993230585 23.385932488622853 26.92594864655448 26 26.33723411598517 23.39429339187262 23.862844243177843 26.405628248964362 27 26.984183309887154 23.496811676487486 23.55767127456137 25.961333739063985 28 26.37101799830254 24.110414477195636 23.16927815266815 26.349289371833674 29 26.494049661820906 23.91398186072874 23.496617236877025 26.095351240573322 30 26.503334153220358 23.792311274483595 23.61449625071821 26.089858321577843 31 26.409760090686635 23.25701902688808 23.50638782730263 26.826833055122655 32 25.584850043311423 23.48636054742528 23.871350976135457 27.057438433127846 33 25.963569794584274 23.252012206918746 24.00347269144281 26.78094530705417 34 26.340490979460373 23.106960257515823 24.39128249450465 26.161266268519157 35 26.078143335047642 23.15202163723985 24.38802563102945 26.381809396683053 36 25.738457335574573 22.69508855265959 24.876992641432942 26.689461470332894 37 25.3599806338148 22.252592609155965 25.10920214622442 27.278224610804813 38 25.341168601502822 21.905663734193276 25.675556121590866 27.077611542713036 39 24.707003811988564 21.63962173718181 26.55627033716801 27.09710411366162 40 25.224699274837477 21.591352103885196 26.851915764871958 26.332032856405373 41 24.485731535285442 21.495833645246876 27.31020992672543 26.70822489274225 42 23.694508150422372 21.777090541776808 27.71702620170971 26.811375106091113 43 23.456514067219718 21.4190299991153 27.63011169583423 27.494344237830752 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 30.5 2 37.0 3 103.0 4 169.0 5 169.0 6 227.0 7 285.0 8 275.0 9 265.0 10 344.5 11 424.0 12 424.0 13 786.0 14 1148.0 15 1806.0 16 2464.0 17 2333.0 18 2202.0 19 2202.0 20 2603.0 21 3004.0 22 3282.5 23 3561.0 24 4827.5 25 6094.0 26 6094.0 27 8041.0 28 9988.0 29 12496.5 30 15005.0 31 19178.0 32 23351.0 33 23351.0 34 29027.0 35 34703.0 36 41470.5 37 48238.0 38 57750.5 39 67263.0 40 67263.0 41 78349.5 42 89436.0 43 103074.0 44 116712.0 45 133062.0 46 149412.0 47 149412.0 48 167482.5 49 185553.0 50 196655.5 51 207758.0 52 213714.0 53 219670.0 54 219670.0 55 212283.0 56 204896.0 57 190490.5 58 176085.0 59 162670.0 60 149255.0 61 149255.0 62 131259.5 63 113264.0 64 96337.0 65 79410.0 66 66414.0 67 53418.0 68 53418.0 69 43965.0 70 34512.0 71 28923.5 72 23335.0 73 19072.0 74 14809.0 75 14809.0 76 12083.0 77 9357.0 78 7570.0 79 5783.0 80 4532.0 81 3281.0 82 3281.0 83 2495.0 84 1709.0 85 1263.0 86 817.0 87 583.5 88 350.0 89 350.0 90 227.5 91 105.0 92 64.0 93 23.0 94 17.5 95 12.0 96 12.0 97 8.5 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2057194.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.74269123693705 #Duplication Level Percentage of deduplicated Percentage of total 1 83.8408227561402 55.119213235076906 2 9.076061620519871 11.933694335305047 3 2.8040688641441913 5.53041100627621 4 1.2997917378122805 3.418072275652583 5 0.725585401132799 2.3850968496351355 6 0.5084057251329587 2.0054376366304307 7 0.3298656282300647 1.5180377902485187 8 0.24326687634130625 1.2794415311584515 9 0.18536226506908218 1.0967592743474355 >10 0.9203213663431553 10.370998925748019 >50 0.041865545870398715 1.878162164915686 >100 0.023250484013563257 2.7025881127250355 >500 8.878195000948091E-4 0.37822232838224046 >1k 4.4390975004738323E-4 0.3838645338982159 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 4.86099026149211E-5 6 0.0 0.0 0.0 0.0 1.944396104596844E-4 7 0.0 0.0 0.0 0.0 1.944396104596844E-4 8 0.0 0.0 0.0 0.0 2.9165941568952663E-4 9 0.0 0.0 0.0 0.0 3.888792209193688E-4 10 0.0 0.0 0.0 0.0 3.888792209193688E-4 11 0.0 0.0 0.0 0.0 3.888792209193688E-4 12 4.86099026149211E-5 0.0 0.0 0.0 5.347089287641321E-4 13 4.86099026149211E-5 0.0 0.0 0.0 5.833188313790533E-4 14 9.72198052298422E-5 0.0 0.0 0.0 6.805386366088954E-4 15 9.72198052298422E-5 0.0 0.0 9.72198052298422E-5 7.291485392238165E-4 16 9.72198052298422E-5 0.0 0.0 1.944396104596844E-4 0.0010208079549133432 17 9.72198052298422E-5 0.0 0.0 2.4304951307460552E-4 0.0010208079549133432 18 9.72198052298422E-5 0.0 0.0 3.402693183044477E-4 0.0011180277601431853 19 9.72198052298422E-5 0.0 0.0 4.8609902614921103E-4 0.0011666376627581065 20 9.72198052298422E-5 0.0 0.0 6.319287339939743E-4 0.0013610772732177909 21 9.72198052298422E-5 0.0 0.0 0.0011180277601431853 0.0013610772732177909 22 9.72198052298422E-5 0.0 0.0 0.0015555168836774752 0.0013610772732177909 23 9.72198052298422E-5 0.0 0.0 0.0018471762993670017 0.001458297078447633 24 9.72198052298422E-5 0.0 0.0 0.0025763248385908184 0.001458297078447633 25 9.72198052298422E-5 0.0 0.0 0.003256863475199714 0.001458297078447633 26 9.72198052298422E-5 0.0 0.0 0.0055415288981010054 0.001458297078447633 27 9.72198052298422E-5 0.0 0.0 0.019152301630278912 0.001458297078447633 28 9.72198052298422E-5 0.0 0.0 0.07208848557792799 0.001458297078447633 29 9.72198052298422E-5 0.0 0.0 0.15812801320633835 0.001458297078447633 30 9.72198052298422E-5 0.0 0.0 0.2754723181187579 0.001458297078447633 31 9.72198052298422E-5 0.0 0.0 0.7520438033554444 0.001458297078447633 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1675 0.0 21.316418 37 TAAGACG 45 0.0038268203 20.555555 4 TTATACG 50 0.007036724 18.5 4 TAGTCCG 65 0.0015805081 17.076921 20 TCTTATA 3000 0.0 16.403332 37 GTCTTAC 160 6.311893E-10 16.1875 1 TATACCG 115 1.2432847E-6 16.086956 5 TAGAGTA 130 2.591678E-7 15.653845 5 GGACCGT 220 1.8189894E-12 15.136364 6 TATAAGT 125 2.961311E-6 14.800001 4 TTAGGCA 225 1.8189894E-12 14.8 4 GTTATAC 115 2.211411E-5 14.478261 3 TAGGACT 220 1.8189894E-11 14.295454 4 TCCTACG 210 1.364242E-10 14.095238 9 ATTAGGT 80 0.0063008503 13.875001 3 TCTATAC 160 1.7853017E-7 13.875001 3 ATCTATA 175 3.5699486E-8 13.742857 2 TAGATAG 135 6.572536E-6 13.703703 5 GTATTAG 275 0.0 13.454546 1 CTCTTAT 4580 0.0 13.370087 37 >>END_MODULE