##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211927.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1994112 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2540268550613 33.0 31.0 34.0 30.0 34.0 2 32.398069917838114 34.0 31.0 34.0 30.0 34.0 3 32.47200107115348 34.0 31.0 34.0 30.0 34.0 4 36.024508151999484 37.0 35.0 37.0 35.0 37.0 5 35.865401241254254 37.0 35.0 37.0 35.0 37.0 6 35.8801712240837 37.0 35.0 37.0 35.0 37.0 7 35.863798522851276 37.0 35.0 37.0 35.0 37.0 8 35.83570030168817 37.0 35.0 37.0 35.0 37.0 9 37.656206873034215 39.0 37.0 39.0 35.0 39.0 10 37.49294121894859 39.0 37.0 39.0 35.0 39.0 11 37.61205890140574 39.0 37.0 39.0 35.0 39.0 12 37.53244251075165 39.0 37.0 39.0 35.0 39.0 13 37.60080075742987 39.0 37.0 39.0 35.0 39.0 14 38.90580819933886 40.0 38.0 41.0 36.0 41.0 15 38.86032780505809 40.0 38.0 41.0 36.0 41.0 16 38.81553794370627 40.0 38.0 41.0 35.0 41.0 17 38.78833335339239 40.0 38.0 41.0 35.0 41.0 18 38.770500353039345 40.0 38.0 41.0 35.0 41.0 19 38.78955394681944 40.0 38.0 41.0 35.0 41.0 20 38.745521314750626 40.0 38.0 41.0 35.0 41.0 21 38.730264398388854 40.0 38.0 41.0 35.0 41.0 22 38.703863173181844 40.0 38.0 41.0 35.0 41.0 23 38.64348742698505 40.0 38.0 41.0 35.0 41.0 24 38.61322734129276 40.0 38.0 41.0 34.0 41.0 25 38.55527422732524 40.0 38.0 41.0 34.0 41.0 26 38.44978667196226 40.0 38.0 41.0 34.0 41.0 27 38.359901048687334 40.0 38.0 41.0 34.0 41.0 28 38.292113983567624 40.0 38.0 41.0 34.0 41.0 29 38.22797315296232 40.0 38.0 41.0 34.0 41.0 30 38.176203242345466 40.0 38.0 41.0 34.0 41.0 31 38.13197954778869 40.0 38.0 41.0 34.0 41.0 32 38.0759260262212 40.0 38.0 41.0 33.0 41.0 33 38.04492275258361 40.0 38.0 41.0 33.0 41.0 34 37.99331431735028 40.0 38.0 41.0 33.0 41.0 35 37.93813687495988 40.0 38.0 41.0 33.0 41.0 36 37.876331419699596 40.0 37.0 41.0 33.0 41.0 37 37.86251775226266 40.0 37.0 41.0 33.0 41.0 38 37.81584885904102 40.0 37.0 41.0 33.0 41.0 39 37.77517712144554 40.0 37.0 41.0 33.0 41.0 40 37.72997304063162 40.0 37.0 41.0 33.0 41.0 41 37.65102963123435 40.0 37.0 41.0 33.0 41.0 42 37.56667980534694 40.0 37.0 41.0 33.0 41.0 43 36.58234241607292 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 3.0 15 2.0 16 7.0 17 16.0 18 45.0 19 84.0 20 200.0 21 381.0 22 794.0 23 1391.0 24 2349.0 25 3624.0 26 5303.0 27 8090.0 28 11227.0 29 15754.0 30 22010.0 31 29126.0 32 38445.0 33 51214.0 34 71001.0 35 101877.0 36 154723.0 37 269982.0 38 602941.0 39 603521.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96965265742346 16.7833602124655 12.39835074459208 27.848636385518965 2 18.788312792862186 19.052741270299762 35.12280152769754 27.036144409140512 3 20.519509435778932 20.709368380512228 28.71939991334489 30.05172227036395 4 15.835068441491751 14.387406524809037 32.55489160087297 37.22263343282624 5 16.699613662622763 34.301834601065536 33.10405834777585 15.89449338853585 6 37.936635454778866 32.41798855831568 14.232249743244111 15.41312624366134 7 31.614623451441044 28.888848770781177 19.56234153347455 19.934186244303227 8 28.085433516271905 34.339796360485266 18.538577572373065 19.03619255086976 9 28.154737547339366 13.962054287823353 16.975425653122795 40.90778251171449 10 17.345465049104565 25.573488349701524 32.02618508890173 25.054861512292188 11 38.85122801527697 20.031071474420695 19.611135181975737 21.506565328326595 12 22.98958132742795 22.83592897490211 28.871798575004814 25.302691122665127 13 32.79549995185827 18.10078872199756 22.68042115989473 26.423290166249437 14 23.651981433339753 18.329863117016494 23.81375770267668 34.20439774696707 15 27.250475399576352 25.230227790615572 20.75991719622569 26.759379613582386 16 26.339192582964248 24.2930687945311 22.87063113807048 26.497107484434174 17 26.023463075293662 24.109177418319533 23.590299842737018 26.277059663649787 18 26.195018133384686 23.95522417998588 23.956227132678606 25.893530553950832 19 27.351823769176452 23.83948343924514 23.5960668207202 25.212625970858205 20 26.697397137171837 23.161738157134604 23.57921721548238 26.561647490211183 21 26.19050484626741 23.936619407535787 23.873383240259326 25.999492505937482 22 26.984642788368955 23.407712305025996 22.876799297130752 26.73084560947429 23 26.31537245651197 23.364535191604084 23.616476908017205 26.703615443866745 24 26.184888311188136 23.222466942679247 23.658701216381026 26.933943529751588 25 26.735910520572563 22.950716910584763 23.369349364529175 26.9440232043135 26 26.23804480390269 23.32697461326144 23.895749085307145 26.539231497528725 27 27.029224035560688 23.519992858976828 23.41097190127736 26.03981120418512 28 26.34932240516079 24.146537406123628 23.056428124398227 26.44771206431735 29 26.508591292765903 23.968613598433787 23.474458806727007 26.048336302073306 30 26.914436099878042 23.596167115989473 23.311779879966622 26.177616904165863 31 26.47970625521535 23.238664628666793 23.56031155722447 26.721317558893382 32 25.836061364657553 23.515780457667372 23.660105350150847 26.988052827524236 33 26.176413360934593 23.133555186468964 23.783117497913857 26.906913954682587 34 26.471732781308173 23.168658530714424 24.350387540920472 26.009221147056937 35 26.27640774439951 23.13626315873933 24.13971732781308 26.44761176904808 36 25.911734145323834 22.77845978560883 24.650671577123052 26.659134491944286 37 25.470384812889147 22.413184414917517 25.005365796906094 27.111064975287245 38 25.727943064381538 21.97088227742474 25.224711550805573 27.07646310738815 39 24.949200446113355 21.87384660440336 26.218687816933052 26.95826513255023 40 25.583417581359523 21.573261682392967 26.51039660761281 26.332924128634698 41 24.83175468579498 21.557816210924962 26.844981625906666 26.76544747737339 42 24.04839848514025 21.712621959047436 27.367319388279093 26.871660167533218 43 23.80748924834713 21.42347069773413 27.2269561589319 27.542083894986842 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 14.0 2 14.0 3 51.5 4 89.0 5 89.0 6 123.0 7 157.0 8 148.0 9 139.0 10 189.5 11 240.0 12 240.0 13 392.5 14 545.0 15 928.0 16 1311.0 17 1318.0 18 1325.0 19 1325.0 20 1660.5 21 1996.0 22 2289.5 23 2583.0 24 3608.5 25 4634.0 26 4634.0 27 6352.0 28 8070.0 29 10389.5 30 12709.0 31 16440.5 32 20172.0 33 20172.0 34 25502.5 35 30833.0 36 37643.0 37 44453.0 38 53836.0 39 63219.0 40 63219.0 41 74463.0 42 85707.0 43 100014.0 44 114321.0 45 130969.0 46 147617.0 47 147617.0 48 166016.5 49 184416.0 50 196034.5 51 207653.0 52 211980.0 53 216307.0 54 216307.0 55 209308.0 56 202309.0 57 188455.0 58 174601.0 59 161816.5 60 149032.0 61 149032.0 62 130959.0 63 112886.0 64 94704.5 65 76523.0 66 63488.0 67 50453.0 68 50453.0 69 41051.5 70 31650.0 71 25648.0 72 19646.0 73 15935.5 74 12225.0 75 12225.0 76 9849.5 77 7474.0 78 5904.5 79 4335.0 80 3347.0 81 2359.0 82 2359.0 83 1766.0 84 1173.0 85 887.0 86 601.0 87 419.0 88 237.0 89 237.0 90 147.0 91 57.0 92 37.5 93 18.0 94 12.0 95 6.0 96 6.0 97 4.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1994112.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.33689658609939 #Duplication Level Percentage of deduplicated Percentage of total 1 83.78374795953253 55.57953823987325 2 8.939235772088104 11.860023179435379 3 2.8394522286851234 5.650813465663634 4 1.3475356916836747 3.5756534330119134 5 0.7905668625286913 2.622187610198142 6 0.5192377668433479 2.0666773225610613 7 0.3427238036689955 1.5914663465109353 8 0.2528203926562379 1.3417056193995116 9 0.19453604507303338 1.1614425753850728 >10 0.9350542872014932 10.499754946881644 >50 0.03762641202321288 1.7039603408116495 >100 0.016556254754388718 1.8774660231886644 >500 7.554360509684123E-4 0.3380140951199409 >1k 1.510872101936803E-4 0.13129680195911567 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.014763463636947E-5 7 0.0 0.0 0.0 0.0 5.014763463636947E-5 8 0.0 0.0 0.0 0.0 5.014763463636947E-5 9 0.0 0.0 0.0 0.0 1.0029526927273894E-4 10 0.0 0.0 0.0 5.014763463636947E-5 1.0029526927273894E-4 11 0.0 0.0 0.0 5.014763463636947E-5 1.0029526927273894E-4 12 0.0 0.0 0.0 5.014763463636947E-5 1.504429039091084E-4 13 0.0 0.0 0.0 5.014763463636947E-5 1.504429039091084E-4 14 0.0 0.0 0.0 5.014763463636947E-5 2.5073817318184736E-4 15 0.0 0.0 0.0 5.014763463636947E-5 3.008858078182168E-4 16 0.0 0.0 0.0 5.014763463636947E-5 4.5132871172732527E-4 17 0.0 0.0 0.0 5.014763463636947E-5 4.5132871172732527E-4 18 0.0 0.0 0.0 5.014763463636947E-5 5.014763463636947E-4 19 0.0 0.0 0.0 2.0059053854547788E-4 5.014763463636947E-4 20 0.0 0.0 0.0 3.510334424545863E-4 5.516239810000642E-4 21 0.0 0.0 0.0 6.017716156364336E-4 5.516239810000642E-4 22 0.0 0.0 0.0 9.026574234546505E-4 5.516239810000642E-4 23 0.0 0.0 0.0 0.0011032479620001283 6.017716156364336E-4 24 0.0 0.0 0.0 0.0015545766737274536 6.017716156364336E-4 25 0.0 0.0 0.0 0.002005905385454779 6.017716156364336E-4 26 0.0 0.0 0.0 0.0033598915206367545 6.017716156364336E-4 27 0.0 0.0 0.0 0.014542814044547147 6.017716156364336E-4 28 0.0 0.0 0.0 0.05556357917709737 6.519192502728032E-4 29 0.0 0.0 0.0 0.12476731497528724 6.519192502728032E-4 30 0.0 0.0 0.0 0.21708911034084344 6.519192502728032E-4 31 0.0 0.0 0.0 0.6307569484562552 6.519192502728032E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1560 0.0 23.125 37 TAATACG 100 5.8821497E-6 16.65 27 TATTAAG 145 2.9831426E-9 16.586208 2 TCTTATA 2765 0.0 16.459312 37 TACTTAC 275 0.0 16.145454 31 ACTATCG 195 1.8189894E-12 16.128206 11 GTAACGT 150 4.6766218E-9 16.033333 26 TCTATAC 170 1.4879333E-9 15.235294 3 TTATACT 260 0.0 14.942307 4 TATACTG 300 0.0 14.8 5 GTATAGA 180 3.3342076E-9 14.388888 1 TTAGCCG 185 4.9039954E-9 14.0 4 CGGGTAA 175 3.5695848E-8 13.742858 23 GTCTTAG 310 0.0 13.725806 1 TAGTACT 135 6.5722925E-6 13.703704 4 TTATACG 95 0.001245635 13.631579 4 ATACCGT 110 2.457779E-4 13.454545 6 TTAGATG 290 0.0 13.396553 3 CGTATTA 125 4.847873E-5 13.32 2 GTATTAG 155 1.8893006E-6 13.129032 1 >>END_MODULE