FastQCFastQC Report
Thu 9 Feb 2017
SRR3211926.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3211926.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences966769
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTAAT551.9022536E-523.5454542
CTTATAC7350.022.90476237
ATAGAAT450.00382537520.5555553
TAGGCCG450.00382537520.5555555
TAATACG801.616237E-518.527
CGCGGTA902.151497E-618.522
GCATTAA801.616237E-518.51
CAATAGG500.007034092718.52
TAGTACT701.218943E-418.54
TCTATAC500.007034092718.53
TCTTATA14750.018.06101837
ATACCGT752.0668386E-417.2666666
GGTAATA1005.875845E-616.65000225
GTAATAC1005.875845E-616.65000226
ACTCCGT1352.2178938E-816.4444436
GTATTAG803.381869E-416.18751
ATTAATG700.00259209415.8571423
TACTAGT700.00259209415.8571424
GTCTTAT700.00259209415.8571421
CGGTAAT1059.339947E-615.85714224
Produced by FastQC (version 0.11.5)