##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211926.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 966769 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.56308487342891 34.0 31.0 34.0 31.0 34.0 2 32.692475658611315 34.0 31.0 34.0 31.0 34.0 3 32.76721636709493 34.0 31.0 34.0 31.0 34.0 4 36.2212162367639 37.0 37.0 37.0 35.0 37.0 5 36.129151844959864 37.0 35.0 37.0 35.0 37.0 6 36.14838705006056 37.0 36.0 37.0 35.0 37.0 7 36.12591632540969 37.0 36.0 37.0 35.0 37.0 8 36.106735942091646 37.0 35.0 37.0 35.0 37.0 9 37.96603635408252 39.0 38.0 39.0 35.0 39.0 10 37.839015318033574 39.0 38.0 39.0 35.0 39.0 11 37.93821688531593 39.0 38.0 39.0 35.0 39.0 12 37.87019649988777 39.0 38.0 39.0 35.0 39.0 13 37.9258974998164 39.0 38.0 39.0 35.0 39.0 14 39.318289063881856 40.0 39.0 41.0 36.0 41.0 15 39.2901851424694 40.0 39.0 41.0 36.0 41.0 16 39.24494062180314 40.0 39.0 41.0 36.0 41.0 17 39.22570955419547 40.0 39.0 41.0 36.0 41.0 18 39.20924646942548 40.0 39.0 41.0 36.0 41.0 19 39.2175752428967 40.0 39.0 41.0 36.0 41.0 20 39.1719842071891 40.0 39.0 41.0 36.0 41.0 21 39.15692683567636 40.0 39.0 41.0 36.0 41.0 22 39.141629489567826 40.0 39.0 41.0 36.0 41.0 23 39.079239197781476 40.0 39.0 41.0 36.0 41.0 24 39.04409740072344 40.0 39.0 41.0 36.0 41.0 25 38.98878429076646 40.0 39.0 41.0 35.0 41.0 26 38.896782995731144 40.0 38.0 41.0 35.0 41.0 27 38.814502740571946 40.0 38.0 41.0 35.0 41.0 28 38.743533356986 40.0 38.0 41.0 35.0 41.0 29 38.68465165928986 40.0 38.0 41.0 35.0 41.0 30 38.638441034000884 40.0 38.0 41.0 35.0 41.0 31 38.58983686899352 40.0 38.0 41.0 35.0 41.0 32 38.53661733051018 40.0 38.0 41.0 34.0 41.0 33 38.495359284379205 40.0 38.0 41.0 34.0 41.0 34 38.446884416029064 40.0 38.0 41.0 34.0 41.0 35 38.401556111128926 40.0 38.0 41.0 34.0 41.0 36 38.33674952341252 40.0 38.0 41.0 34.0 41.0 37 38.31337889402742 40.0 38.0 41.0 34.0 41.0 38 38.26845916656409 40.0 38.0 41.0 34.0 41.0 39 38.211788958892974 40.0 38.0 41.0 34.0 41.0 40 38.17358334824555 40.0 38.0 41.0 34.0 41.0 41 38.09660425603221 40.0 38.0 41.0 33.0 41.0 42 38.0197834229273 40.0 37.0 41.0 33.0 41.0 43 37.04711156439646 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 1.0 16 0.0 17 5.0 18 17.0 19 29.0 20 73.0 21 150.0 22 306.0 23 547.0 24 877.0 25 1429.0 26 2070.0 27 3029.0 28 4216.0 29 5996.0 30 8222.0 31 11168.0 32 14795.0 33 19889.0 34 27943.0 35 39921.0 36 60107.0 37 102269.0 38 241304.0 39 422405.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.62820901373544 15.865113589699298 12.00203978406424 28.50463761250102 2 19.143145880763658 18.514040065413763 34.36518961613374 27.977624437688835 3 20.5575478733803 20.052566848957714 28.326828849497655 31.063056428164327 4 16.078194480791172 13.881599430680957 31.576622750626054 38.46358333790182 5 17.13325520367327 33.9295115999789 32.584205740978454 16.35302745536938 6 38.917052574089574 31.515801603071676 13.854809163305815 15.712336659532939 7 32.20376325678627 28.448367707280642 19.026675451943536 20.321193583989558 8 28.766644358683408 33.75159939964976 18.106910751172204 19.37484549049463 9 28.759093433902 13.380342149986191 16.34371809604983 41.51684632006198 10 17.651372768468992 25.19878068080379 31.372644344202183 25.777202206525036 11 39.655491642781264 19.47300751265297 19.022227646935306 21.84927319763046 12 23.38262811488577 22.300880561954305 28.244182426205228 26.0723088969547 13 33.54689693194548 17.626237498306214 21.962640506677396 26.864225063070908 14 24.099035033187867 17.88193456761646 23.088142048410738 34.93088835078493 15 27.911010799891184 24.566468308354946 20.201620035396253 27.32090085635762 16 26.902807185584148 23.730280966807996 22.31463772628208 27.052274121325777 17 26.773096779065114 23.312911357314935 22.768520711772926 27.14547115184703 18 26.841882600703993 23.565815618829316 23.183718137424762 26.40858364304193 19 28.13226323971911 23.155996934117663 22.84496089551899 25.86677893064424 20 27.368275151561544 22.60715848356743 22.7363517034576 27.28821466141343 21 26.841055102097812 23.365457518807492 23.27339829886974 26.520089080224956 22 27.826605942060617 22.559680751037735 22.079007498171745 27.534705808729903 23 26.992487347029126 22.692908026633045 22.938571675343333 27.3760329509945 24 26.642248561962578 22.50496240570395 23.041181502509904 27.81160752982357 25 27.488986510738343 22.103832456357207 22.71121643329482 27.695964599609628 26 26.967145202214798 22.590711948769563 23.222403697263772 27.219739151751867 27 27.86911868295322 22.877853965114728 22.719387982030867 26.533639369901184 28 26.94883679555302 23.615672409851783 22.22350944227628 27.211981352318908 29 27.016484806608403 23.47396327354311 22.862028054271498 26.64752386557699 30 27.70475677230031 22.871337413591046 22.57519634990365 26.848709464204994 31 27.086718750808103 22.602400366581882 22.9333998090547 27.377481073555316 32 26.39968803302547 22.98015348030398 22.962982884225706 27.657175602444845 33 26.55060309132792 22.486757436367945 23.223024321218407 27.73961515108573 34 26.94997460613652 22.551095452998595 23.90250411421963 26.59642582664525 35 26.727480918399326 22.4565537372423 23.512855708033666 27.303109636324706 36 26.29221665154758 21.955089581895987 24.411932943650445 27.34076082290599 37 25.792097181436308 21.57940521468934 24.79920229134364 27.829295312530704 38 26.152369387102816 21.050323293361703 24.948358915107953 27.84894840442753 39 25.225570948178934 21.182516195699282 26.11440788854421 27.47750496757757 40 26.067343905317607 20.71828947763116 26.248566100071475 26.965800516979755 41 25.025833472111746 20.80041871429473 26.862156316555453 27.311591497038073 42 24.284498158298415 20.957540012143543 27.363827346553315 27.394134483004727 43 23.691491969643213 20.554031004304026 27.246012232498146 28.508464793554612 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5.0 1 6.0 2 7.0 3 17.5 4 28.0 5 28.0 6 39.5 7 51.0 8 43.0 9 35.0 10 51.0 11 67.0 12 67.0 13 118.0 14 169.0 15 267.5 16 366.0 17 390.5 18 415.0 19 415.0 20 507.5 21 600.0 22 756.0 23 912.0 24 1265.5 25 1619.0 26 1619.0 27 2179.0 28 2739.0 29 3527.0 30 4315.0 31 5671.0 32 7027.0 33 7027.0 34 9007.5 35 10988.0 36 13688.0 37 16388.0 38 20246.0 39 24104.0 40 24104.0 41 29203.5 42 34303.0 43 40857.5 44 47412.0 45 56235.5 46 65059.0 47 65059.0 48 74973.0 49 84887.0 50 93217.5 51 101548.0 52 105182.5 53 108817.0 54 108817.0 55 105252.5 56 101688.0 57 96614.5 58 91541.0 59 85720.0 60 79899.0 61 79899.0 62 70759.5 63 61620.0 64 52162.5 65 42705.0 66 35583.5 67 28462.0 68 28462.0 69 23469.5 70 18477.0 71 15272.5 72 12068.0 73 9930.5 74 7793.0 75 7793.0 76 6267.5 77 4742.0 78 3843.0 79 2944.0 80 2232.5 81 1521.0 82 1521.0 83 1189.0 84 857.0 85 612.5 86 368.0 87 264.5 88 161.0 89 161.0 90 102.5 91 44.0 92 26.0 93 8.0 94 6.5 95 5.0 96 5.0 97 4.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 966769.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 73.27170100216325 #Duplication Level Percentage of deduplicated Percentage of total 1 86.78334327943614 63.5876318073894 2 7.65061959745332 11.211478232517806 3 2.3335530075055013 5.129501947159257 4 1.0584218384586386 3.1020947392680522 5 0.6099771017846723 2.234702991006631 6 0.38736953023477333 1.7029934638026447 7 0.2473235195879569 1.268527048463601 8 0.18021907412070232 1.056396649108704 9 0.12623468108294006 0.8324486827571356 >10 0.5873892735911249 7.267941553191353 >50 0.02483197291472063 1.2728878974708406 >100 0.010717123829527737 1.333394987864618 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.068746515455088E-4 2 0.0 0.0 0.0 0.0 3.1031197731826323E-4 3 0.0 0.0 0.0 0.0 3.1031197731826323E-4 4 0.0 0.0 0.0 0.0 3.1031197731826323E-4 5 0.0 1.034373257727544E-4 0.0 0.0 3.1031197731826323E-4 6 0.0 1.034373257727544E-4 0.0 0.0 4.137493030910176E-4 7 0.0 1.034373257727544E-4 0.0 0.0 4.137493030910176E-4 8 0.0 1.034373257727544E-4 0.0 0.0 4.137493030910176E-4 9 0.0 1.034373257727544E-4 0.0 1.034373257727544E-4 5.17186628863772E-4 10 0.0 1.034373257727544E-4 0.0 2.068746515455088E-4 5.17186628863772E-4 11 0.0 1.034373257727544E-4 0.0 2.068746515455088E-4 5.17186628863772E-4 12 0.0 1.034373257727544E-4 0.0 2.068746515455088E-4 5.17186628863772E-4 13 0.0 1.034373257727544E-4 0.0 2.068746515455088E-4 5.17186628863772E-4 14 0.0 1.034373257727544E-4 0.0 2.068746515455088E-4 6.206239546365265E-4 15 0.0 2.068746515455088E-4 0.0 2.068746515455088E-4 0.001034373257727544 16 0.0 2.068746515455088E-4 0.0 3.1031197731826323E-4 0.0011378105835002984 17 0.0 2.068746515455088E-4 0.0 4.137493030910176E-4 0.0011378105835002984 18 0.0 2.068746515455088E-4 0.0 4.137493030910176E-4 0.001241247909273053 19 0.0 2.068746515455088E-4 0.0 4.137493030910176E-4 0.001241247909273053 20 0.0 2.068746515455088E-4 0.0 5.17186628863772E-4 0.0013446852350458072 21 0.0 2.068746515455088E-4 0.0 7.240612804092808E-4 0.0013446852350458072 22 0.0 2.068746515455088E-4 0.0 8.274986061820352E-4 0.0013446852350458072 23 0.0 2.068746515455088E-4 0.0 0.0017584345381368247 0.0016549972123640704 24 0.0 2.068746515455088E-4 0.0 0.00258593314431886 0.0016549972123640704 25 0.0 2.068746515455088E-4 0.0 0.003103119773182632 0.0016549972123640704 26 0.0 2.068746515455088E-4 0.0 0.005378740940183229 0.0016549972123640704 27 0.0 2.068746515455088E-4 0.0 0.019446217245277828 0.0016549972123640704 28 0.0 2.068746515455088E-4 0.0 0.06744113640383587 0.0016549972123640704 29 0.0 2.068746515455088E-4 0.0 0.1574316098261322 0.0016549972123640704 30 0.0 2.068746515455088E-4 0.0 0.269971420266889 0.0016549972123640704 31 0.0 2.068746515455088E-4 0.0 0.7469209294050595 0.0017584345381368247 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTAAT 55 1.9022536E-5 23.545454 2 CTTATAC 735 0.0 22.904762 37 ATAGAAT 45 0.003825375 20.555555 3 TAGGCCG 45 0.003825375 20.555555 5 TAATACG 80 1.616237E-5 18.5 27 CGCGGTA 90 2.151497E-6 18.5 22 GCATTAA 80 1.616237E-5 18.5 1 CAATAGG 50 0.0070340927 18.5 2 TAGTACT 70 1.218943E-4 18.5 4 TCTATAC 50 0.0070340927 18.5 3 TCTTATA 1475 0.0 18.061018 37 ATACCGT 75 2.0668386E-4 17.266666 6 GGTAATA 100 5.875845E-6 16.650002 25 GTAATAC 100 5.875845E-6 16.650002 26 ACTCCGT 135 2.2178938E-8 16.444443 6 GTATTAG 80 3.381869E-4 16.1875 1 ATTAATG 70 0.002592094 15.857142 3 TACTAGT 70 0.002592094 15.857142 4 GTCTTAT 70 0.002592094 15.857142 1 CGGTAAT 105 9.339947E-6 15.857142 24 >>END_MODULE