##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211912.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3070974 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37969354348164 33.0 31.0 34.0 31.0 34.0 2 32.51524304666858 34.0 31.0 34.0 31.0 34.0 3 32.588048612590015 34.0 31.0 34.0 31.0 34.0 4 36.104604923389125 37.0 35.0 37.0 35.0 37.0 5 35.97573733935878 37.0 35.0 37.0 35.0 37.0 6 35.994417731963864 37.0 35.0 37.0 35.0 37.0 7 35.976444932454655 37.0 35.0 37.0 35.0 37.0 8 35.949848484552454 37.0 35.0 37.0 35.0 37.0 9 37.784028129186375 39.0 38.0 39.0 35.0 39.0 10 37.63243615869102 39.0 37.0 39.0 35.0 39.0 11 37.74547912160767 39.0 37.0 39.0 35.0 39.0 12 37.6700577732016 39.0 37.0 39.0 35.0 39.0 13 37.73030771344857 39.0 37.0 39.0 35.0 39.0 14 39.07641940309492 40.0 38.0 41.0 36.0 41.0 15 39.034766494278365 40.0 38.0 41.0 36.0 41.0 16 38.996534649918885 40.0 38.0 41.0 36.0 41.0 17 38.97372006405785 40.0 38.0 41.0 36.0 41.0 18 38.95286869898605 40.0 38.0 41.0 36.0 41.0 19 38.959405387346166 40.0 38.0 41.0 36.0 41.0 20 38.909551822972126 40.0 38.0 41.0 35.0 41.0 21 38.896609674976084 40.0 38.0 41.0 35.0 41.0 22 38.86733557496742 40.0 38.0 41.0 35.0 41.0 23 38.80341871992404 40.0 38.0 41.0 35.0 41.0 24 38.77282647134101 40.0 38.0 41.0 35.0 41.0 25 38.71409429060617 40.0 38.0 41.0 35.0 41.0 26 38.61455258168907 40.0 38.0 41.0 35.0 41.0 27 38.5295740048597 40.0 38.0 41.0 34.0 41.0 28 38.465331520227785 40.0 38.0 41.0 34.0 41.0 29 38.40351269662329 40.0 38.0 41.0 34.0 41.0 30 38.35470993893143 40.0 38.0 41.0 34.0 41.0 31 38.30713317664038 40.0 38.0 41.0 34.0 41.0 32 38.24706982214763 40.0 38.0 41.0 34.0 41.0 33 38.2083456258503 40.0 38.0 41.0 34.0 41.0 34 38.15680953339234 40.0 38.0 41.0 34.0 41.0 35 38.108128235537 40.0 38.0 41.0 33.0 41.0 36 38.04165811888997 40.0 38.0 41.0 33.0 41.0 37 38.02449939335207 40.0 38.0 41.0 33.0 41.0 38 37.96951325540366 40.0 38.0 41.0 33.0 41.0 39 37.92521981625374 40.0 37.0 41.0 33.0 41.0 40 37.88505894221182 40.0 37.0 41.0 33.0 41.0 41 37.8063604576268 40.0 37.0 41.0 33.0 41.0 42 37.72861020640357 40.0 37.0 41.0 33.0 41.0 43 36.751382786047685 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 0.0 12 0.0 13 2.0 14 1.0 15 2.0 16 12.0 17 23.0 18 67.0 19 128.0 20 312.0 21 539.0 22 1124.0 23 1988.0 24 3320.0 25 5343.0 26 7922.0 27 11373.0 28 16318.0 29 22727.0 30 30587.0 31 40896.0 32 54727.0 33 72901.0 34 100804.0 35 143589.0 36 217838.0 37 375018.0 38 874453.0 39 1088955.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.29577521659252 16.650678253869945 12.275681917202816 27.777864612334717 2 19.25698491748872 18.994625158011758 34.72754897957456 27.020840944924966 3 20.496526509179173 20.611017872505595 28.839449633894652 30.05300598442058 4 15.847382621930372 14.43877414787621 32.53479189338627 37.17905133680715 5 16.816358588512962 34.16020454748233 33.13736944695722 15.886067417047489 6 37.98407280556592 32.352341634934064 14.341769093453738 15.321816466046279 7 31.59675073771383 28.724697766897407 19.746243374251947 19.932308121136813 8 28.095874468491104 33.91148866776469 18.61914167948019 19.373495184264016 9 28.254521204021916 13.706628581029992 17.183310571825096 40.855539643122995 10 17.404413062435566 25.41473812542861 32.203724290729916 24.977124521405912 11 38.89362137224216 19.9274888032266 19.80560564824059 21.37328417629065 12 22.931161253726017 22.861443958822182 28.821018999183973 25.386375788267827 13 32.639058487632916 18.28045434445228 22.60325225807838 26.477234909836422 14 23.75262701670545 18.47589722348675 23.675452804224328 34.09602295558347 15 27.177175710377227 25.403992349007186 20.710986156183672 26.70784578443191 16 26.39817204574184 24.33638318005949 22.750729898722685 26.51471487547599 17 26.04538494953067 23.937096178606527 23.47864228091804 26.53887659094476 18 26.241120895194815 23.87184000906553 23.88900068838095 25.99803840735871 19 27.481867316362823 23.541716732215903 23.602446650476363 25.37396930094491 20 26.821816140416686 23.184761577271576 23.578903631225792 26.414518651085945 21 26.36026876163719 23.697237423696844 24.00010550398668 25.94238831067928 22 27.171086437071757 23.123022207286677 23.10556846134158 26.600322894299982 23 26.542393390500862 23.33481169166525 23.623547447812975 26.499247470020915 24 26.291788859169763 23.124878295941286 23.697074608902582 26.886258235986364 25 26.770855109812064 22.92702575795171 23.52970100039922 26.772418131837 26 26.34460597842899 23.265582841144212 23.844715064341152 26.54509611608565 27 26.954379945906414 23.545135842895444 23.422471176896973 26.07801303430117 28 26.386091188007455 23.952433332226192 23.060143133741935 26.60133234602442 29 26.365543960971337 23.98900153501788 23.491927968129982 26.1535265358808 30 27.051938570629385 23.545168405854298 23.166558883272863 26.236334140243457 31 26.406149970660774 23.200228982726653 23.715602932489823 26.678018114122747 32 25.92949337897358 23.551550745789445 23.713551466082098 26.80540440915488 33 26.042747349863593 23.135721761239267 23.879817933984462 26.941712954912678 34 26.425264427507365 23.01009386598519 24.469174926261182 26.09546678024627 35 26.27944749776455 22.986485720816912 24.17350325987781 26.560563521540725 36 25.84495993779172 22.5452250654027 24.779369672292894 26.83044532451268 37 25.553260952388396 22.08735730097357 25.199171337823113 27.160210408814923 38 25.51903728263411 21.77608797729971 25.53955194671137 27.16532279335481 39 24.82993994739128 21.643296231098017 26.60784493779498 26.91891888371572 40 25.456776905307564 21.237659452668762 26.814098719168577 26.491464922855094 41 24.50587338088828 21.418221059507506 27.280042097393203 26.79586346221101 42 23.847775982473312 21.647366600954616 27.658130612633 26.846726803939074 43 23.387465996130217 21.31340089496036 27.624721016850028 27.67441209205939 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 27.0 2 29.0 3 73.0 4 117.0 5 117.0 6 161.5 7 206.0 8 196.5 9 187.0 10 264.5 11 342.0 12 342.0 13 633.5 14 925.0 15 1332.5 16 1740.0 17 1864.5 18 1989.0 19 1989.0 20 2579.5 21 3170.0 22 3934.5 23 4699.0 24 6646.5 25 8594.0 26 8594.0 27 11467.5 28 14341.0 29 18128.0 30 21915.0 31 27696.5 32 33478.0 33 33478.0 34 42114.5 35 50751.0 36 61708.5 37 72666.0 38 86915.0 39 101164.0 40 101164.0 41 117882.0 42 134600.0 43 155024.5 44 175449.0 45 200498.0 46 225547.0 47 225547.0 48 250218.0 49 274889.0 50 293772.5 51 312656.0 52 315484.0 53 318312.0 54 318312.0 55 307837.5 56 297363.0 57 282045.0 58 266727.0 59 248164.0 60 229601.0 61 229601.0 62 202840.0 63 176079.0 64 149699.5 65 123320.0 66 102592.0 67 81864.0 68 81864.0 69 67210.5 70 52557.0 71 43154.0 72 33751.0 73 27854.0 74 21957.0 75 21957.0 76 17626.0 77 13295.0 78 10686.0 79 8077.0 80 6283.5 81 4490.0 82 4490.0 83 3365.0 84 2240.0 85 1687.5 86 1135.0 87 818.5 88 502.0 89 502.0 90 328.0 91 154.0 92 102.0 93 50.0 94 33.0 95 16.0 96 16.0 97 10.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3070974.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.83567885573419 #Duplication Level Percentage of deduplicated Percentage of total 1 83.20941170902042 53.117292836315954 2 9.109422644572732 11.630123570001954 3 2.8408329287188283 5.440394955614698 4 1.3957500395668083 3.563946051546603 5 0.8410124567872364 2.6843300552571026 6 0.5468033601333183 2.0943338216824126 7 0.3832632723292129 1.71261098187238 8 0.2986041329747102 1.5249278030054838 9 0.20123502873163526 1.15613772017734 >10 1.0993877116590216 12.348832727653775 >50 0.05338992768578275 2.3132622863110877 >100 0.020427553565210015 2.208175031124301 >500 4.0820822682495093E-4 0.17133298890336615 >1k 5.1026028244205764E-5 0.03429917053351621 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 2 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 3 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 4 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 5 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 6 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 7 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 8 0.0 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-5 9 0.0 0.0 0.0 6.512591770558787E-5 3.2562958852793935E-5 10 0.0 0.0 0.0 1.3025183541117574E-4 6.512591770558787E-5 11 0.0 0.0 0.0 1.6281479426396967E-4 6.512591770558787E-5 12 0.0 0.0 0.0 1.6281479426396967E-4 6.512591770558787E-5 13 0.0 0.0 0.0 1.6281479426396967E-4 9.76888765583818E-5 14 0.0 0.0 0.0 1.6281479426396967E-4 1.3025183541117574E-4 15 0.0 0.0 0.0 1.953777531167636E-4 1.6281479426396967E-4 16 0.0 0.0 3.2562958852793935E-5 1.953777531167636E-4 1.6281479426396967E-4 17 0.0 0.0 3.2562958852793935E-5 2.605036708223515E-4 1.953777531167636E-4 18 0.0 0.0 3.2562958852793935E-5 3.2562958852793935E-4 2.605036708223515E-4 19 0.0 0.0 3.2562958852793935E-5 3.907555062335272E-4 2.605036708223515E-4 20 0.0 0.0 3.2562958852793935E-5 4.558814239391151E-4 3.2562958852793935E-4 21 0.0 0.0 3.2562958852793935E-5 5.861332593502908E-4 3.5819254738073326E-4 22 0.0 0.0 3.2562958852793935E-5 8.791998890254363E-4 3.5819254738073326E-4 23 0.0 0.0 3.2562958852793935E-5 0.0011071406009949937 4.88444382791909E-4 24 0.0 0.0 3.2562958852793935E-5 0.0021165923254316057 4.88444382791909E-4 25 0.0 0.0 3.2562958852793935E-5 0.002832977420193072 5.21007341644703E-4 26 0.0 0.0 3.2562958852793935E-5 0.004917006786771884 5.535703004974969E-4 27 0.0 0.0 3.2562958852793935E-5 0.018495760628386954 5.535703004974969E-4 28 0.0 0.0 3.2562958852793935E-5 0.06662381381281639 5.535703004974969E-4 29 0.0 0.0 3.2562958852793935E-5 0.14047660449095303 5.535703004974969E-4 30 0.0 0.0 3.2562958852793935E-5 0.23718859228375103 5.535703004974969E-4 31 0.0 0.0 3.2562958852793935E-5 0.6627213385720622 5.861332593502908E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2170 0.0 22.42166 37 TCTTATA 4170 0.0 18.10072 37 GGTATCA 1775 0.0 17.92676 1 TACTTAC 590 0.0 17.559322 31 CTAGACA 300 0.0 15.416667 4 TATACCG 120 1.9379695E-6 15.416666 5 GTCTTAT 275 0.0 14.799999 1 TAACACG 105 1.6570538E-4 14.095238 4 GTACTTA 760 0.0 13.631579 30 ACTAGAC 250 1.0913936E-11 13.32 3 CTCTTAT 6630 0.0 13.309955 37 CGCGCTA 85 0.009409411 13.058824 36 GTACTAA 85 0.009409411 13.058824 1 GTATCAA 2470 0.0 12.95749 2 GTAACGT 130 7.0052374E-5 12.807693 26 GGAGTGT 1270 0.0 12.673228 6 AGTGTAC 950 0.0 12.657895 27 GTATAAA 295 1.8189894E-12 12.542373 1 TCAATAC 345 0.0 12.333333 3 CGTTAGA 125 7.224742E-4 11.84 2 >>END_MODULE