##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211911.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3291121 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.609125583653714 34.0 31.0 34.0 31.0 34.0 2 32.73571315062558 34.0 31.0 34.0 31.0 34.0 3 32.81438087508785 34.0 31.0 34.0 31.0 34.0 4 36.258050372502254 37.0 37.0 37.0 35.0 37.0 5 36.16413799431865 37.0 35.0 37.0 35.0 37.0 6 36.18361859074765 37.0 36.0 37.0 35.0 37.0 7 36.170375078886494 37.0 36.0 37.0 35.0 37.0 8 36.153353523009336 37.0 36.0 37.0 35.0 37.0 9 38.01062647043363 39.0 38.0 39.0 35.0 39.0 10 37.89425973703185 39.0 38.0 39.0 35.0 39.0 11 37.991992394080924 39.0 38.0 39.0 35.0 39.0 12 37.932950505314146 39.0 38.0 39.0 35.0 39.0 13 37.97973122227958 39.0 38.0 39.0 35.0 39.0 14 39.393419141988396 40.0 39.0 41.0 37.0 41.0 15 39.366870437155 40.0 39.0 41.0 36.0 41.0 16 39.32936376389686 40.0 39.0 41.0 36.0 41.0 17 39.31520445465238 40.0 39.0 41.0 36.0 41.0 18 39.29942290180154 40.0 39.0 41.0 36.0 41.0 19 39.31683733293306 40.0 39.0 41.0 36.0 41.0 20 39.27288543933815 40.0 39.0 41.0 36.0 41.0 21 39.26354181447598 40.0 39.0 41.0 36.0 41.0 22 39.24124424474214 40.0 39.0 41.0 36.0 41.0 23 39.18713441407958 40.0 39.0 41.0 36.0 41.0 24 39.162628174412305 40.0 39.0 41.0 36.0 41.0 25 39.11169902291651 40.0 39.0 41.0 36.0 41.0 26 39.02929579313553 40.0 39.0 41.0 36.0 41.0 27 38.955278459831774 40.0 39.0 41.0 35.0 41.0 28 38.893240631383655 40.0 38.0 41.0 35.0 41.0 29 38.84282103271195 40.0 38.0 41.0 35.0 41.0 30 38.801175040358586 40.0 38.0 41.0 35.0 41.0 31 38.755547122090015 40.0 38.0 41.0 35.0 41.0 32 38.69919033666644 40.0 38.0 41.0 35.0 41.0 33 38.665785305371635 40.0 38.0 41.0 35.0 41.0 34 38.62213057496215 40.0 38.0 41.0 35.0 41.0 35 38.58325050947686 40.0 38.0 41.0 35.0 41.0 36 38.5147941993017 40.0 38.0 41.0 35.0 41.0 37 38.502058113329774 40.0 38.0 41.0 35.0 41.0 38 38.45759332458454 40.0 38.0 41.0 34.0 41.0 39 38.41337313334879 40.0 38.0 41.0 34.0 41.0 40 38.375698736084146 40.0 38.0 41.0 34.0 41.0 41 38.30361174809434 40.0 38.0 41.0 34.0 41.0 42 38.23246547301056 40.0 38.0 41.0 34.0 41.0 43 37.31418231052581 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 0.0 13 0.0 14 2.0 15 4.0 16 3.0 17 18.0 18 37.0 19 81.0 20 180.0 21 402.0 22 851.0 23 1539.0 24 2591.0 25 3980.0 26 6094.0 27 8789.0 28 12692.0 29 18089.0 30 25117.0 31 33956.0 32 45792.0 33 61977.0 34 88225.0 35 126753.0 36 192755.0 37 330428.0 38 806055.0 39 1524708.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.18792897617559 16.727978096217065 12.312370162020784 27.77172276558656 2 18.461460396017042 19.180090917350046 35.86635070542833 26.492097981204584 3 20.037731824505997 20.947057248882675 29.31177553180208 29.703435394809247 4 15.492502402676777 14.441948503260743 33.187081240707954 36.87846785335452 5 16.309427699558903 34.805405209957335 33.250220821416164 15.63494626906759 6 37.08429437872385 32.91963437381974 14.651390817900648 15.344680429555765 7 30.950183843134297 29.62589342658626 19.920841561279577 19.503081168999863 8 27.636966249493717 34.852744703096604 18.745071967879635 18.765217079530043 9 28.52474886216581 14.132631404314822 17.276879215319035 40.06574051820033 10 17.040698290947066 25.797228360792566 32.277938125034 24.884135223226373 11 38.29692071485673 20.46120455613756 20.076958580374285 21.164916148631423 12 22.596464851945584 23.032668807983665 29.133173772705412 25.237692567365343 13 32.13822888918396 18.64929912938479 22.98101467554672 26.231457305884533 14 23.406887805097412 18.78095639753142 24.114306341213222 33.69784945615795 15 26.94440587264947 25.696229339486454 21.071027166731334 26.28833762113274 16 25.722907179650946 24.886292542875207 23.30278953584508 26.088010741628764 17 25.65730643145603 24.34690186109839 23.760840151425608 26.23495155601997 18 25.664781088267492 24.68274487628987 24.261034462117923 25.391439573324714 19 27.17879409477804 24.145329205459173 23.94302731500908 24.732849384753706 20 26.257679374292227 23.574672581166116 23.901400161221662 26.26624788332 21 25.799811067414414 24.339913360827513 24.497002693003385 25.363272878754685 22 26.7068880177909 23.50955798951178 23.28395096989749 26.49960302279983 23 25.836819734066296 23.82094125375518 24.127402183025175 26.21483682915335 24 25.553056238284768 23.455229996101632 24.343316456611593 26.648397309002007 25 26.27785487072642 23.240014572542304 23.844580615541027 26.63754994119025 26 25.739983428138924 23.617120124115765 24.40958567004981 26.2333107776955 27 26.58003154548253 24.081794622561738 23.719000304151685 25.61917352780405 28 25.816097311523944 24.818959862004466 23.115163495963838 26.24977933050775 29 25.872673778934292 24.5686500131718 23.926680301331977 25.631995906561926 30 26.860270406344828 23.969249383416773 23.454288067804253 25.716192142434142 31 26.12471556044278 23.67515506114786 24.008050752312055 26.19207862609731 32 25.479190828899938 24.070278789506673 24.00416149998739 26.44636888160599 33 25.623761630155805 23.443653393479 24.14040687048577 26.792178105879426 34 26.027514637109974 23.637386774901316 24.85417582641295 25.48092276157577 35 25.900172008261013 23.398835837394007 24.424626138024095 26.276366016320885 36 25.476729661413238 23.008452135305873 25.234897167256992 26.279921036023897 37 24.99437121880356 22.759539986527386 25.58225601550353 26.66383277916552 38 25.50586866906443 22.240142492482047 25.473296180845374 26.780692657608153 39 24.38974440623727 22.416830010200172 26.77935572712155 26.414069856441014 40 25.446010645005153 21.830099835284088 26.71469690722401 26.009192612486746 41 24.335355643259547 22.216077743723186 27.08195778885067 26.366608824166597 42 23.792349172212145 22.296718959892388 27.465596068938215 26.445335798957252 43 23.284072509032637 21.987371476162682 27.21367582656487 27.51488018823981 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 46.0 2 54.0 3 150.0 4 246.0 5 246.0 6 311.5 7 377.0 8 365.5 9 354.0 10 465.5 11 577.0 12 577.0 13 1003.0 14 1429.0 15 2237.0 16 3045.0 17 3149.0 18 3253.0 19 3253.0 20 4019.0 21 4785.0 22 5697.5 23 6610.0 24 9118.5 25 11627.0 26 11627.0 27 15474.5 28 19322.0 29 23929.5 30 28537.0 31 35884.5 32 43232.0 33 43232.0 34 52854.0 35 62476.0 36 74770.5 37 87065.0 38 102707.5 39 118350.0 40 118350.0 41 137224.5 42 156099.0 43 177826.5 44 199554.0 45 227118.0 46 254682.0 47 254682.0 48 281982.5 49 309283.0 50 327187.5 51 345092.0 52 345224.5 53 345357.0 54 345357.0 55 325051.5 56 304746.0 57 283982.0 58 263218.0 59 243051.0 60 222884.0 61 222884.0 62 195498.5 63 168113.0 64 141894.0 65 115675.0 66 96955.5 67 78236.0 68 78236.0 69 64332.0 70 50428.0 71 42036.0 72 33644.0 73 27789.0 74 21934.0 75 21934.0 76 17825.5 77 13717.0 78 10867.0 79 8017.0 80 6317.5 81 4618.0 82 4618.0 83 3548.0 84 2478.0 85 1881.5 86 1285.0 87 885.0 88 485.0 89 485.0 90 314.5 91 144.0 92 91.0 93 38.0 94 26.0 95 14.0 96 14.0 97 8.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3291121.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.4500491171343 #Duplication Level Percentage of deduplicated Percentage of total 1 80.98465511159148 47.33557069006702 2 9.991900561127535 11.680541571428522 3 3.2803627648625566 5.752120941847047 4 1.6441798367145015 3.8440956885345794 5 0.9181854873968581 2.683399341849312 6 0.631622145048493 2.215100724093248 7 0.43706851675187747 1.7882673390190194 8 0.3257070340816763 1.523007371189609 9 0.2512568447966684 1.321737742744331 >10 1.426475977813683 14.936989400163798 >50 0.07582701612688292 3.001989662534435 >100 0.031198562341563863 3.202186481015471 >500 0.0013001177890311637 0.5160461244857697 >1k 2.600235571823085E-4 0.1989469210279354 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.0384783786436293E-5 0.0 5 0.0 0.0 0.0 3.0384783786436293E-5 0.0 6 0.0 0.0 0.0 3.0384783786436293E-5 6.0769567572872585E-5 7 0.0 0.0 0.0 3.0384783786436293E-5 6.0769567572872585E-5 8 0.0 0.0 0.0 6.0769567572872585E-5 6.0769567572872585E-5 9 0.0 0.0 0.0 9.115435135930888E-5 6.0769567572872585E-5 10 0.0 3.0384783786436293E-5 0.0 9.115435135930888E-5 6.0769567572872585E-5 11 0.0 3.0384783786436293E-5 0.0 9.115435135930888E-5 6.0769567572872585E-5 12 0.0 3.0384783786436293E-5 0.0 9.115435135930888E-5 6.0769567572872585E-5 13 0.0 3.0384783786436293E-5 0.0 9.115435135930888E-5 9.115435135930888E-5 14 0.0 3.0384783786436293E-5 0.0 9.115435135930888E-5 1.2153913514574517E-4 15 0.0 6.0769567572872585E-5 0.0 1.5192391893218148E-4 1.8230870271861776E-4 16 0.0 6.0769567572872585E-5 0.0 1.8230870271861776E-4 2.1269348650505406E-4 17 0.0 6.0769567572872585E-5 0.0 2.7346305407792665E-4 2.1269348650505406E-4 18 0.0 6.0769567572872585E-5 0.0 3.0384783786436295E-4 2.1269348650505406E-4 19 0.0 6.0769567572872585E-5 3.0384783786436293E-5 3.950021892236718E-4 2.1269348650505406E-4 20 0.0 6.0769567572872585E-5 3.0384783786436293E-5 5.16541324369417E-4 2.7346305407792665E-4 21 0.0 6.0769567572872585E-5 3.0384783786436293E-5 6.380804595151622E-4 2.7346305407792665E-4 22 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.0011546217838845792 3.342326216507992E-4 23 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.0013977000541760694 4.253869730101081E-4 24 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.0020965500812641044 4.253869730101081E-4 25 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.002765015324565703 4.253869730101081E-4 26 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.0043146392976739535 5.16541324369417E-4 27 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.01680278543389927 5.16541324369417E-4 28 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.06025302624850317 5.469261081558533E-4 29 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.13107995725468616 5.773108919422896E-4 30 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.2283112653712823 5.773108919422896E-4 31 0.0 6.0769567572872585E-5 3.0384783786436293E-5 0.6804368481134544 5.773108919422896E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2770 0.0 21.772564 37 CTCGTTA 880 0.0 18.5 22 TCGTTAC 865 0.0 17.53757 23 TACTTAC 1030 0.0 17.24272 31 CGTTACG 720 0.0 16.444445 24 GTACTTA 1180 0.0 15.521187 30 AGTGTAC 1450 0.0 15.182759 27 TCTCGTT 1105 0.0 14.733032 21 TCTTATA 4635 0.0 14.648328 37 GTAACGT 140 6.0041566E-7 14.535714 26 GTCTTAG 480 0.0 14.260417 1 CGTATTA 210 1.364242E-10 14.095239 14 AGTATCG 120 3.3040327E-5 13.875001 8 CGTAATA 80 0.006301911 13.875 2 ATCTCGT 1230 0.0 13.837399 20 GATCTCG 1215 0.0 13.703704 19 TTATACT 380 0.0 13.631579 4 GTGTACT 1510 0.0 13.599337 28 TTACATA 575 0.0 13.513042 34 ACTTACA 900 0.0 13.361112 32 >>END_MODULE