##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211910.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4614109 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5837079271426 34.0 31.0 34.0 31.0 34.0 2 32.710853601421206 34.0 31.0 34.0 31.0 34.0 3 32.79097979696622 34.0 31.0 34.0 31.0 34.0 4 36.2421641968146 37.0 37.0 37.0 35.0 37.0 5 36.15188501181918 37.0 35.0 37.0 35.0 37.0 6 36.17333032227891 37.0 36.0 37.0 35.0 37.0 7 36.15737491246956 37.0 36.0 37.0 35.0 37.0 8 36.14069823664764 37.0 36.0 37.0 35.0 37.0 9 37.99098547520225 39.0 38.0 39.0 35.0 39.0 10 37.88279882421503 39.0 38.0 39.0 35.0 39.0 11 37.9706515385744 39.0 38.0 39.0 35.0 39.0 12 37.9116436131006 39.0 38.0 39.0 35.0 39.0 13 37.960996803499874 39.0 38.0 39.0 35.0 39.0 14 39.36596361290988 40.0 39.0 41.0 36.0 41.0 15 39.33997116236309 40.0 39.0 41.0 36.0 41.0 16 39.30653415426467 40.0 39.0 41.0 36.0 41.0 17 39.29248897241049 40.0 39.0 41.0 36.0 41.0 18 39.28430386018189 40.0 39.0 41.0 36.0 41.0 19 39.29423275436276 40.0 39.0 41.0 36.0 41.0 20 39.25855392666276 40.0 39.0 41.0 36.0 41.0 21 39.24620267965061 40.0 39.0 41.0 36.0 41.0 22 39.21787413344592 40.0 39.0 41.0 36.0 41.0 23 39.16465670836992 40.0 39.0 41.0 36.0 41.0 24 39.13550156704144 40.0 39.0 41.0 36.0 41.0 25 39.089828393737555 40.0 39.0 41.0 36.0 41.0 26 39.001414574298096 40.0 39.0 41.0 36.0 41.0 27 38.922461953109476 40.0 38.0 41.0 35.0 41.0 28 38.87092545928152 40.0 38.0 41.0 35.0 41.0 29 38.81341706491979 40.0 38.0 41.0 35.0 41.0 30 38.755894149878124 40.0 38.0 41.0 35.0 41.0 31 38.71653032037171 40.0 38.0 41.0 35.0 41.0 32 38.6604594733241 40.0 38.0 41.0 35.0 41.0 33 38.62936484595401 40.0 38.0 41.0 35.0 41.0 34 38.5805125106494 40.0 38.0 41.0 35.0 41.0 35 38.530319938258934 40.0 38.0 41.0 35.0 41.0 36 38.47583878057497 40.0 38.0 41.0 34.0 41.0 37 38.445400184521 40.0 38.0 41.0 34.0 41.0 38 38.396090339434984 40.0 38.0 41.0 34.0 41.0 39 38.35958209916584 40.0 38.0 41.0 34.0 41.0 40 38.30490913847072 40.0 38.0 41.0 34.0 41.0 41 38.232870528199484 40.0 38.0 41.0 34.0 41.0 42 38.14602862654523 40.0 38.0 41.0 34.0 41.0 43 37.24675554912118 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 3.0 13 1.0 14 2.0 15 6.0 16 6.0 17 14.0 18 55.0 19 128.0 20 274.0 21 644.0 22 1230.0 23 2279.0 24 3900.0 25 6091.0 26 9288.0 27 13661.0 28 19682.0 29 27551.0 30 37589.0 31 50315.0 32 66591.0 33 89658.0 34 124786.0 35 178380.0 36 268178.0 37 464665.0 38 1115212.0 39 2133913.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.987671075824174 17.385436711616478 12.59348229528171 27.033409917277634 2 18.010974599863157 19.56514247929557 36.28800273248855 26.135880188352722 3 19.86858134474066 21.499318720038907 29.375747300291344 29.256352634929083 4 14.803291383016742 14.956256993495384 34.002924508285346 36.237527115202525 5 15.976800721439394 34.828869452368814 33.70691936406357 15.487410462128222 6 36.20712037795379 33.88181770304949 14.93803028927145 14.973031629725261 7 30.488248110306888 29.56731191222401 20.462303773057812 19.482136204411297 8 27.103000817709333 34.8236246694649 19.173582592002052 18.899791920823716 9 27.310148069757346 14.658583054713272 18.14259264356347 39.88867623196592 10 17.06981781314659 26.006754500164604 32.60597008003062 24.317457606658188 11 37.35323547839897 20.891248993034193 20.673872247057883 21.081643281508956 12 22.239678343099396 23.802385249243134 29.65976746539798 24.29816894225949 13 31.767368304476552 19.044825338976604 23.44008344839708 25.74772290814976 14 22.976852085635603 19.348957729433785 24.85513454493598 32.81905563999463 15 26.253172606022098 26.144700959600222 21.603629216388256 25.99849721798943 16 25.41654304222115 25.094790781925614 23.718750467316656 25.76991570853658 17 24.874769971840717 25.125262537144224 24.64950437885191 25.35046311216315 18 25.245437418145084 24.573996843160835 25.030184592518296 25.150381146175782 19 26.117111667713093 24.67893584655239 24.759644819834122 24.444307665900393 20 25.761658426361407 24.331718214719245 24.634225155929347 25.272398202990004 21 25.345760145674927 24.716819650337694 24.688710214691504 25.248709989295875 22 25.735044404022535 24.606310774192806 24.113561253104336 25.545083568680322 23 25.50904194070838 24.305667681452693 24.401309115150944 25.783981262687988 24 25.326319772679838 24.271099794131434 24.57443029629339 25.828150136895335 25 25.742759869782013 24.02500677812336 24.49833759887337 25.733895753221258 26 25.47948043706813 24.281199252119965 24.794082671215612 25.44523763959629 27 25.802576402074596 24.55980125306966 24.609865089879758 25.027757254975985 28 25.561533115060787 24.816253798945798 24.29933926571739 25.322873820276026 29 25.427877841637464 24.86742294124391 24.445174572165502 25.259524644953117 30 25.490490146635025 24.745080794580275 24.553906290466916 25.210522768317784 31 25.422589713420297 24.052791123920134 24.59636302480067 25.928256137858902 32 24.691484314739856 24.48164965327 24.776376110750743 26.0504899212394 33 25.08178718794896 24.235773363828205 24.885888044690752 25.79655140353208 34 25.3246509781195 24.083544623674907 25.27311340065872 25.318690997546874 35 25.143207496831998 24.20025187961533 25.16050227682094 25.49603834673173 36 24.880556571160326 23.693176732495917 25.594497225791592 25.831769470552167 37 24.664328475985286 23.224353824324478 25.737515086878094 26.373802612812135 38 24.454580505141944 23.057170951098037 26.342940749774225 26.145307793985793 39 24.09763185048294 22.685506562588788 27.08421062441308 26.132650962515193 40 24.28670410690341 22.71082022553 27.43493922661992 25.567536440946668 41 23.762464215734823 22.563944631563754 27.80959444174379 25.863996710957633 42 23.106107809763486 22.91751235178883 28.073957507289055 25.902422331158625 43 22.88697557860033 22.64075252665249 27.96000267874036 26.512269216006818 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 66.0 1 108.5 2 151.0 3 502.0 4 853.0 5 853.0 6 1139.5 7 1426.0 8 1373.5 9 1321.0 10 1764.0 11 2207.0 12 2207.0 13 3846.5 14 5486.0 15 8856.0 16 12226.0 17 11765.5 18 11305.0 19 11305.0 20 13242.5 21 15180.0 22 16062.5 23 16945.0 24 21786.5 25 26628.0 26 26628.0 27 33874.0 28 41120.0 29 49188.5 30 57257.0 31 69336.5 32 81416.0 33 81416.0 34 96768.0 35 112120.0 36 128899.0 37 145678.0 38 167610.0 39 189542.0 40 189542.0 41 212850.5 42 236159.0 43 262647.0 44 289135.0 45 320748.0 46 352361.0 47 352361.0 48 382912.0 49 413463.0 50 429588.5 51 445714.0 52 448966.0 53 452218.0 54 452218.0 55 430920.5 56 409623.0 57 382040.5 58 354458.0 59 322740.0 60 291022.0 61 291022.0 62 255282.0 63 219542.0 64 186566.0 65 153590.0 66 127569.5 67 101549.0 68 101549.0 69 83297.0 70 65045.0 71 53708.5 72 42372.0 73 34450.5 74 26529.0 75 26529.0 76 21658.5 77 16788.0 78 13890.0 79 10992.0 80 8638.0 81 6284.0 82 6284.0 83 4865.0 84 3446.0 85 2614.0 86 1782.0 87 1266.5 88 751.0 89 751.0 90 502.5 91 254.0 92 163.0 93 72.0 94 44.0 95 16.0 96 16.0 97 14.0 98 12.0 99 8.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4614109.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.820646350242 #Duplication Level Percentage of deduplicated Percentage of total 1 81.11984662298822 48.52641656819651 2 10.285758846722432 12.306014848273112 3 3.340093067505598 5.99419578504442 4 1.5916857279195464 3.8086267612241085 5 0.914782129143025 2.7361429117493152 6 0.5907440199931143 2.1203213462117025 7 0.398913875333158 1.670430010235656 8 0.268172374690841 1.283379582982831 9 0.21822747570600132 1.174905778330326 >10 1.1707809924137875 12.434221908821526 >50 0.06634209024174964 2.7080616628423293 >100 0.031716542185587136 3.561563175584866 >500 0.0022112395154167746 0.8510012954274461 >1k 6.887458595202002E-4 0.7031313890301016 >5k 3.624978207989842E-5 0.12158697604578207 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5607 0.12151858571178098 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.1672656627747633E-5 6.50179698832429E-5 2 0.0 0.0 0.0 2.1672656627747633E-5 6.50179698832429E-5 3 0.0 0.0 0.0 2.1672656627747633E-5 6.50179698832429E-5 4 0.0 0.0 0.0 2.1672656627747633E-5 8.669062651099053E-5 5 0.0 0.0 0.0 4.3345313255495266E-5 8.669062651099053E-5 6 0.0 0.0 0.0 4.3345313255495266E-5 1.0836328313873816E-4 7 0.0 0.0 0.0 4.3345313255495266E-5 1.0836328313873816E-4 8 0.0 0.0 0.0 4.3345313255495266E-5 1.5170859639423342E-4 9 0.0 0.0 0.0 4.3345313255495266E-5 1.5170859639423342E-4 10 0.0 0.0 0.0 6.50179698832429E-5 1.5170859639423342E-4 11 0.0 0.0 0.0 1.0836328313873816E-4 1.5170859639423342E-4 12 0.0 0.0 0.0 1.0836328313873816E-4 1.950539096497287E-4 13 0.0 0.0 0.0 1.5170859639423342E-4 2.167265662774763E-4 14 0.0 0.0 0.0 1.7338125302198107E-4 3.0341719278846683E-4 15 0.0 0.0 0.0 1.950539096497287E-4 4.11780475927205E-4 16 0.0 0.0 0.0 2.167265662774763E-4 4.5512578918270027E-4 17 0.0 0.0 0.0 2.600718795329716E-4 4.5512578918270027E-4 18 0.0 0.0 0.0 3.0341719278846683E-4 4.5512578918270027E-4 19 0.0 0.0 0.0 4.11780475927205E-4 4.5512578918270027E-4 20 2.1672656627747633E-5 0.0 0.0 5.201437590659432E-4 4.984711024381955E-4 21 2.1672656627747633E-5 0.0 0.0 7.802156385989148E-4 4.984711024381955E-4 22 2.1672656627747633E-5 0.0 0.0 0.0011919961145261198 4.984711024381955E-4 23 2.1672656627747633E-5 0.0 0.0 0.0016687945603365676 6.068343855769337E-4 24 2.1672656627747633E-5 0.0 0.0 0.0026657367652129587 6.068343855769337E-4 25 4.3345313255495266E-5 0.0 0.0 0.0037276969399725928 6.068343855769337E-4 26 4.3345313255495266E-5 0.0 0.0 0.006631832928090775 6.068343855769337E-4 27 4.3345313255495266E-5 0.0 0.0 0.02225781835669682 6.068343855769337E-4 28 4.3345313255495266E-5 0.0 0.0 0.07336194268492574 6.068343855769337E-4 29 4.3345313255495266E-5 0.0 0.0 0.15218539484004387 6.068343855769337E-4 30 4.3345313255495266E-5 0.0 0.0 0.26314939677411175 6.068343855769337E-4 31 4.3345313255495266E-5 0.0 0.0 0.7308886721141612 6.068343855769337E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3885 0.0 18.571428 37 TCTTATA 6840 0.0 16.363304 37 GCGGTAA 465 0.0 15.913979 23 CGCGGTA 475 0.0 15.189473 22 TATACTG 565 0.0 14.079645 5 ACTCCGT 740 0.0 13.75 6 GTAACGT 420 0.0 13.654761 26 GTATTAG 585 0.0 13.598291 1 CTCTTAT 10720 0.0 13.270988 37 CGGTAAT 560 0.0 13.214285 24 TTATACT 660 0.0 13.174243 4 TAAACCG 185 7.399103E-8 13.0 5 TAGTACT 400 0.0 12.950001 4 TATCGCG 675 0.0 12.881482 7 TAATACT 590 0.0 12.542373 4 TCGCGCG 680 0.0 12.514706 9 GTATCGC 815 0.0 12.484664 6 GTACTAG 445 0.0 12.4719095 1 TTAGCCG 520 0.0 12.451923 4 ATTAGAC 315 0.0 12.333334 3 >>END_MODULE