##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211908.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5032089 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.624246510743355 34.0 31.0 34.0 31.0 34.0 2 32.749821197518564 34.0 31.0 34.0 31.0 34.0 3 32.82941398691478 34.0 31.0 34.0 31.0 34.0 4 36.26777149609238 37.0 37.0 37.0 35.0 37.0 5 36.180716398299 37.0 35.0 37.0 35.0 37.0 6 36.19813004102272 37.0 37.0 37.0 35.0 37.0 7 36.18365493933037 37.0 36.0 37.0 35.0 37.0 8 36.162304760508015 37.0 36.0 37.0 35.0 37.0 9 38.02030111152644 39.0 38.0 39.0 35.0 39.0 10 37.90673972578784 39.0 38.0 39.0 35.0 39.0 11 37.9978466199624 39.0 38.0 39.0 35.0 39.0 12 37.94125362250151 39.0 38.0 39.0 35.0 39.0 13 37.98889407560161 39.0 38.0 39.0 35.0 39.0 14 39.41130095274547 40.0 39.0 41.0 37.0 41.0 15 39.38538785780617 40.0 39.0 41.0 36.0 41.0 16 39.34975235930843 40.0 39.0 41.0 36.0 41.0 17 39.3377943037176 40.0 39.0 41.0 36.0 41.0 18 39.324123043133774 40.0 39.0 41.0 36.0 41.0 19 39.33363618966199 40.0 39.0 41.0 36.0 41.0 20 39.29617918125057 40.0 39.0 41.0 36.0 41.0 21 39.284895199588085 40.0 39.0 41.0 36.0 41.0 22 39.26272289699169 40.0 39.0 41.0 36.0 41.0 23 39.21052211119478 40.0 39.0 41.0 36.0 41.0 24 39.1867681593072 40.0 39.0 41.0 36.0 41.0 25 39.13820800864214 40.0 39.0 41.0 36.0 41.0 26 39.05575020632584 40.0 39.0 41.0 36.0 41.0 27 38.984155685640694 40.0 39.0 41.0 35.0 41.0 28 38.92978721163318 40.0 39.0 41.0 35.0 41.0 29 38.87824022985285 40.0 38.0 41.0 35.0 41.0 30 38.83370266304908 40.0 38.0 41.0 35.0 41.0 31 38.792792019378034 40.0 38.0 41.0 35.0 41.0 32 38.73898752585656 40.0 38.0 41.0 35.0 41.0 33 38.70728240299407 40.0 38.0 41.0 35.0 41.0 34 38.66091239642224 40.0 38.0 41.0 35.0 41.0 35 38.618690368950155 40.0 38.0 41.0 35.0 41.0 36 38.56233981553188 40.0 38.0 41.0 35.0 41.0 37 38.54279008181294 40.0 38.0 41.0 35.0 41.0 38 38.49378101221978 40.0 38.0 41.0 35.0 41.0 39 38.45214184407311 40.0 38.0 41.0 34.0 41.0 40 38.410006857986815 40.0 38.0 41.0 34.0 41.0 41 38.33813690497128 40.0 38.0 41.0 34.0 41.0 42 38.259972349455666 40.0 38.0 41.0 34.0 41.0 43 37.3763017704973 39.0 37.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 3.0 13 3.0 14 4.0 15 6.0 16 5.0 17 14.0 18 76.0 19 98.0 20 287.0 21 595.0 22 1264.0 23 2367.0 24 3912.0 25 6154.0 26 9555.0 27 13939.0 28 20018.0 29 27800.0 30 38922.0 31 51915.0 32 69127.0 33 94065.0 34 130675.0 35 188868.0 36 285376.0 37 490159.0 38 1198014.0 39 2398864.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.18103276790215 17.10738820398447 12.370289953138746 27.34128907497463 2 18.12406338600132 19.35498358633959 36.184356039807724 26.33659698785137 3 19.876178660592053 21.268224786962232 29.297891988794316 29.5577045636514 4 15.004225879152774 14.59701924985826 33.73378332537441 36.664971545614556 5 16.028532086773506 35.004527940582925 33.563873770913034 15.403066201730534 6 36.70239139252108 33.4817806282838 14.79113346365694 15.024694515538178 7 30.836875102964196 29.68133115292675 20.196542628717417 19.285251115391638 8 27.47117548994066 34.962934876549284 18.91057570722616 18.655313926283895 9 27.97281606108318 14.334364912862233 17.63609506906575 40.05672395698884 10 16.932391299120507 25.947573661753598 32.51927777906949 24.60075726005641 11 37.91051787836026 20.695579907271117 20.411642162926768 20.982260051441855 12 22.429333026502512 23.297401933868816 29.50603616112513 24.767228878503538 13 31.847230841902835 18.820116257880176 23.384542681975617 25.94811021824137 14 23.154240713946038 18.891716740304076 24.458708898034196 33.49533364771569 15 26.426738477797194 26.07000790327834 21.297278327152004 26.205975291772464 16 25.684621237819922 25.002518834623157 23.388437684627597 25.924422242929328 17 25.346272691122913 24.80017742134529 24.102018068440366 25.751531819091433 18 25.50119840885167 24.68581139959965 24.580348241058534 25.23264195049014 19 26.756621355464898 24.384703847646573 24.22926144589255 24.629413350995975 20 25.995207954390313 24.001582642914304 24.217556565474098 25.785652837221278 21 25.57254054926294 24.52905741531996 24.617390511177366 25.281011524239734 22 26.24236177062846 23.905737756228078 23.69661983323427 26.15528063990919 23 25.649069402389348 24.10533676967955 24.33152513796954 25.914068689961567 24 25.486453041669176 23.879168273852073 24.35672342043235 26.277655264046402 25 26.020684451328265 23.705403461663735 24.143213683223806 26.13069840378419 26 25.620592163612372 23.954087457515158 24.51403383366232 25.91128654521015 27 26.191309414440006 24.34885392527835 24.090651019884586 25.369185640397056 28 25.680090316367615 24.716156649852575 23.756038496139475 25.847714537640332 29 25.729413768317688 24.685413950349446 24.17916296790458 25.406009313428278 30 26.255000656784887 24.317833011300078 23.86122344020545 25.565942891709586 31 25.869772971026546 23.899040736362174 24.223736901314744 26.00744939129654 32 25.228766820300674 24.357856150795428 24.24311255226209 26.170264476641808 33 25.358712852654236 23.873266152486572 24.43198043595811 26.336040558901086 34 25.74869005695249 23.88874680078194 24.941987313817382 25.420575828448182 35 25.6153458335097 23.940057498983027 24.604115706220618 25.840480961286655 36 25.331447834090376 23.57237719762111 25.075927711135478 26.020247257153045 37 25.086082539478138 23.244958505304655 25.35225430233845 26.31670465287875 38 25.21471698930603 22.958814917621687 25.469322978985463 26.357145114086816 39 24.4982550984293 22.929960102057017 26.43210404267492 26.13968075683876 40 25.19893825407301 22.611742359882744 26.512031086890552 25.677288299153687 41 24.429714975231956 22.640875389922556 26.84578909474773 26.083620540097762 42 23.896715658248493 22.90482143698174 27.108443431743755 26.090019473026015 43 23.611088754590785 22.54526897278645 26.945111662373222 26.898530610249537 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 65.0 1 81.0 2 97.0 3 299.5 4 502.0 5 502.0 6 666.5 7 831.0 8 783.5 9 736.0 10 1026.5 11 1317.0 12 1317.0 13 2222.0 14 3127.0 15 5089.5 16 7052.0 17 7038.0 18 7024.0 19 7024.0 20 8824.0 21 10624.0 22 12283.5 23 13943.0 24 18537.0 25 23131.0 26 23131.0 27 29835.5 28 36540.0 29 44540.0 30 52540.0 31 64448.0 32 76356.0 33 76356.0 34 91990.5 35 107625.0 36 126580.5 37 145536.0 38 170319.5 39 195103.0 40 195103.0 41 222412.0 42 249721.0 43 280732.5 44 311744.0 45 349310.0 46 386876.0 47 386876.0 48 423126.5 49 459377.0 50 481489.5 51 503602.0 52 505675.5 53 507749.0 54 507749.0 55 484430.5 56 461112.0 57 431167.0 58 401222.0 59 369458.0 60 337694.0 61 337694.0 62 296043.5 63 254393.0 64 214223.0 65 174053.0 66 143953.5 67 113854.0 68 113854.0 69 93358.5 70 72863.0 71 59155.5 72 45448.0 73 36985.5 74 28523.0 75 28523.0 76 23093.5 77 17664.0 78 14330.0 79 10996.0 80 8773.5 81 6551.0 82 6551.0 83 5097.0 84 3643.0 85 2712.0 86 1781.0 87 1278.0 88 775.0 89 775.0 90 496.5 91 218.0 92 136.5 93 55.0 94 38.5 95 22.0 96 22.0 97 12.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5032089.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.438961715924286 #Duplication Level Percentage of deduplicated Percentage of total 1 79.30339844988177 43.17194672155802 2 10.64086443308507 11.58555222994117 3 3.627364746081015 5.924099116247933 4 1.7395669685379207 3.7880087841008927 5 1.0441216033236551 2.8420447995052966 6 0.6819367407257937 2.22743568726322 7 0.5131846276029043 1.9556066806692758 8 0.3729222187501255 1.6241198711644498 9 0.269888041039943 1.3223182260383335 >10 1.656796563109375 16.629612786507778 >50 0.10579494644226796 3.9025100333321467 >100 0.042074063330026015 4.025659506980047 >500 0.0015008875379571777 0.5381283978903046 >1k 5.857105521802791E-4 0.46295715880107097 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.9872462510102664E-5 2 0.0 0.0 0.0 0.0 3.974492502020533E-5 3 0.0 0.0 0.0 1.9872462510102664E-5 3.974492502020533E-5 4 0.0 0.0 0.0 3.974492502020533E-5 5.961738753030799E-5 5 0.0 0.0 0.0 3.974492502020533E-5 5.961738753030799E-5 6 0.0 0.0 0.0 3.974492502020533E-5 1.1923477506061598E-4 7 0.0 0.0 0.0 3.974492502020533E-5 1.1923477506061598E-4 8 0.0 0.0 0.0 3.974492502020533E-5 1.3910723757071865E-4 9 0.0 0.0 1.9872462510102664E-5 3.974492502020533E-5 1.5897970008082131E-4 10 0.0 0.0 1.9872462510102664E-5 3.974492502020533E-5 1.9872462510102664E-4 11 0.0 0.0 1.9872462510102664E-5 5.961738753030799E-5 2.185970876111293E-4 12 0.0 0.0 1.9872462510102664E-5 5.961738753030799E-5 2.9808693765153994E-4 13 0.0 0.0 1.9872462510102664E-5 5.961738753030799E-5 2.9808693765153994E-4 14 0.0 0.0 1.9872462510102664E-5 7.948985004041066E-5 3.775767876919506E-4 15 0.0 1.9872462510102664E-5 1.9872462510102664E-5 9.936231255051332E-5 5.166840252626692E-4 16 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 9.936231255051332E-5 6.160463378131826E-4 17 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 1.1923477506061598E-4 6.160463378131826E-4 18 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 1.3910723757071865E-4 6.756637253434905E-4 19 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 2.3846955012123196E-4 6.756637253434905E-4 20 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 3.775767876919506E-4 8.147709629142092E-4 21 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 6.756637253434905E-4 8.346434254243118E-4 22 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.0010134955880152358 8.545158879344145E-4 23 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.0012718376006465705 9.340057379748251E-4 24 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.0018083940884193424 9.538782004849278E-4 25 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.0025039302762729356 9.737506629950305E-4 26 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.004073854814571046 9.93623125505133E-4 27 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.013811361444521351 9.93623125505133E-4 28 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.05119146342602446 9.93623125505133E-4 29 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.10832479314256961 9.93623125505133E-4 30 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.18632420849472256 9.93623125505133E-4 31 1.9872462510102664E-5 1.9872462510102664E-5 1.9872462510102664E-5 0.5510037680176165 0.0010333680505253385 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3480 0.0 19.775864 37 TCTTATA 5945 0.0 15.963835 37 TACTTAC 1085 0.0 14.152074 31 TATACCG 265 0.0 13.962264 5 TCTATAC 540 0.0 13.018518 3 TAGCGTA 115 3.580909E-4 12.869565 14 CTCTTAT 9295 0.0 12.47929 37 CGCCGTT 245 1.5661499E-9 12.081633 25 GGACCGT 585 0.0 12.017094 6 TATACTG 655 0.0 11.862595 5 CGCGGTA 360 0.0 11.819445 22 GTATATG 580 0.0 11.801724 1 GGTATCA 5180 0.0 11.607142 1 GTAACGT 320 5.456968E-12 11.562501 26 ACTATCG 465 0.0 11.537634 11 TAATCGA 295 2.1100277E-10 11.288136 20 GTACCGT 495 0.0 11.212121 6 ACCGTCC 595 0.0 11.193277 8 AGTGTAC 1555 0.0 11.064308 27 GTATAGG 670 0.0 11.044776 1 >>END_MODULE