##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3211907.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5432091 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.577742530454664 34.0 31.0 34.0 31.0 34.0 2 32.71035499957567 34.0 31.0 34.0 31.0 34.0 3 32.78932256473612 34.0 31.0 34.0 31.0 34.0 4 36.241959127709755 37.0 37.0 37.0 35.0 37.0 5 36.14585322668564 37.0 35.0 37.0 35.0 37.0 6 36.16203318390653 37.0 36.0 37.0 35.0 37.0 7 36.14730386512303 37.0 36.0 37.0 35.0 37.0 8 36.128218581021564 37.0 36.0 37.0 35.0 37.0 9 37.977190367392595 39.0 38.0 39.0 35.0 39.0 10 37.86214001201379 39.0 38.0 39.0 35.0 39.0 11 37.954597594186104 39.0 38.0 39.0 35.0 39.0 12 37.894201146483006 39.0 38.0 39.0 35.0 39.0 13 37.940033037001776 39.0 38.0 39.0 35.0 39.0 14 39.35750045424497 40.0 39.0 41.0 36.0 41.0 15 39.32526406497976 40.0 39.0 41.0 36.0 41.0 16 39.29371856988405 40.0 39.0 41.0 36.0 41.0 17 39.28000985255954 40.0 39.0 41.0 36.0 41.0 18 39.2645693895776 40.0 39.0 41.0 36.0 41.0 19 39.27091298728243 40.0 39.0 41.0 36.0 41.0 20 39.23129675110376 40.0 39.0 41.0 36.0 41.0 21 39.2215307144155 40.0 39.0 41.0 36.0 41.0 22 39.19458436907629 40.0 39.0 41.0 36.0 41.0 23 39.140405416625015 40.0 39.0 41.0 36.0 41.0 24 39.11110785883373 40.0 39.0 41.0 36.0 41.0 25 39.06416589854625 40.0 39.0 41.0 36.0 41.0 26 38.977495590556195 40.0 39.0 41.0 36.0 41.0 27 38.902816429253484 40.0 38.0 41.0 35.0 41.0 28 38.84947822118591 40.0 38.0 41.0 35.0 41.0 29 38.79439777426409 40.0 38.0 41.0 35.0 41.0 30 38.74748121855838 40.0 38.0 41.0 35.0 41.0 31 38.70653455547781 40.0 38.0 41.0 35.0 41.0 32 38.65158720647353 40.0 38.0 41.0 35.0 41.0 33 38.618983739410844 40.0 38.0 41.0 35.0 41.0 34 38.57230521359086 40.0 38.0 41.0 35.0 41.0 35 38.527030382959346 40.0 38.0 41.0 35.0 41.0 36 38.47506659958384 40.0 38.0 41.0 34.0 41.0 37 38.44882035297273 40.0 38.0 41.0 34.0 41.0 38 38.39711540178543 40.0 38.0 41.0 34.0 41.0 39 38.36032864692436 40.0 38.0 41.0 34.0 41.0 40 38.313415220768576 40.0 38.0 41.0 34.0 41.0 41 38.24758366529574 40.0 38.0 41.0 34.0 41.0 42 38.16653126760947 40.0 38.0 41.0 34.0 41.0 43 37.264866328638455 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 1.0 14 1.0 15 7.0 16 8.0 17 33.0 18 70.0 19 187.0 20 341.0 21 722.0 22 1514.0 23 2628.0 24 4577.0 25 7291.0 26 11038.0 27 16171.0 28 23252.0 29 32314.0 30 44599.0 31 59252.0 32 79460.0 33 105784.0 34 148003.0 35 211216.0 36 320463.0 37 548485.0 38 1322130.0 39 2492541.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.11746618383234 17.04122777030061 12.293479619542456 27.547826426324594 2 18.444389094365317 19.196401533037648 35.75711452551145 26.60209484708559 3 19.94968420079855 21.026359830864394 29.14023347547013 29.883722492866927 4 15.157275531650702 14.591084722255204 33.45389464204484 36.79774510404925 5 16.196138834934835 34.709083481848886 33.460945333942306 15.633832349273971 6 36.94774259120475 33.305204202212366 14.719064905208695 15.027988301374185 7 31.069067141916435 29.282627997211385 20.12374240416812 19.524562456704057 8 27.56861031967248 34.56862191741633 18.796629143363024 19.066138619548163 9 27.815826354897222 14.188274828238335 17.67617663253432 40.31972218433012 10 17.048057552791366 25.770426158177393 32.49847986714508 24.683036421886158 11 38.08321694168967 20.471416992093836 20.388373464288428 21.05699260192806 12 22.56447839331116 23.299020579736236 29.334449662201905 24.802051364750703 13 31.886082173512925 18.787553448570726 23.187056328769163 26.139308049147186 14 23.32315493241921 18.839080567685627 24.238198513242875 33.59956598665229 15 26.392930457166496 25.95160868991333 21.232946944371882 26.42251390854829 16 25.865582885117348 24.847798021056715 23.13521625466142 26.15140283916451 17 25.417689063014592 24.67386868150773 24.046633239391607 25.861809016086067 18 25.694617413441712 24.37074415726835 24.439262891582633 25.495375537707304 19 26.789352387506028 24.18729730411365 24.128848356921857 24.894501951458473 20 26.22146793932576 23.882147776979433 24.105008550114494 25.791375733580306 21 25.828654195962475 24.25038534884633 24.347125259867703 25.573835195323497 22 26.390666135747725 23.83595930186 23.726259372311695 26.04711519008058 23 25.920368417981216 23.906742357593053 24.14473542508769 26.028153799338043 24 25.74601566873603 23.779443311976916 24.093466033613943 26.381074985673102 25 26.150261473896514 23.63395605854173 24.030617307405198 26.185165160156558 26 25.832869883807174 23.92881488914674 24.230687593414764 26.00762763363132 27 26.215466567110163 24.161450903528678 23.993486117960835 25.629596411400325 28 25.902124982810488 24.42908264975679 23.715085038155657 25.95370732927707 29 25.835042159639816 24.474774078711125 23.975647683369075 25.714536078279988 30 26.212521108354036 24.231166230462634 23.835462255694907 25.72085040548842 31 25.91834341508638 23.75142463555931 24.11684561249066 26.213386336863646 32 25.31851914851942 24.15826612624862 24.257914677791664 26.26530004744029 33 25.5430367422048 23.795072652501588 24.358391639609867 26.303498965683747 34 25.84544331087237 23.679868396902776 24.796878402810265 25.677809889414593 35 25.714186305052696 23.722982549445508 24.565788754275285 25.99704239122651 36 25.40949700584913 23.27560418262507 25.07358584383067 26.24131296769513 37 25.26007020132763 22.925867773570065 25.298784574853407 26.515277450248902 38 25.105396798396782 22.665746947170067 25.68966536090798 26.539190893525166 39 24.62640997729972 22.48095622845788 26.487350819417422 26.405282974824978 40 25.019186902428547 22.277682756051032 26.737862086625576 25.965268254894845 41 24.25487717344941 22.32455236850782 27.12371718367752 26.29685327436525 42 23.736439614137538 22.527954704735247 27.369386853055293 26.366218828071915 43 23.456878759947138 22.219546763852076 27.284410367941188 27.0391641082596 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 75.5 2 97.0 3 276.5 4 456.0 5 456.0 6 627.5 7 799.0 8 733.5 9 668.0 10 991.5 11 1315.0 12 1315.0 13 2214.0 14 3113.0 15 4852.5 16 6592.0 17 6685.0 18 6778.0 19 6778.0 20 8575.0 21 10372.0 22 12180.0 23 13988.0 24 18756.0 25 23524.0 26 23524.0 27 30466.0 28 37408.0 29 46043.5 30 54679.0 31 67615.5 32 80552.0 33 80552.0 34 97286.0 35 114020.0 36 134864.5 37 155709.0 38 181366.0 39 207023.0 40 207023.0 41 237754.0 42 268485.0 43 301618.0 44 334751.0 45 374220.0 46 413689.0 47 413689.0 48 449775.0 49 485861.0 50 508650.5 51 531440.0 52 533546.0 53 535652.0 54 535652.0 55 516743.5 56 497835.0 57 469402.0 58 440969.0 59 406339.0 60 371709.0 61 371709.0 62 326266.0 63 280823.0 64 237554.5 65 194286.0 66 162284.5 67 130283.0 68 130283.0 69 107172.5 70 84062.0 71 69262.0 72 54462.0 73 45100.5 74 35739.0 75 35739.0 76 29150.5 77 22562.0 78 18681.0 79 14800.0 80 11697.0 81 8594.0 82 8594.0 83 6667.0 84 4740.0 85 3691.5 86 2643.0 87 1866.0 88 1089.0 89 1089.0 90 704.5 91 320.0 92 213.0 93 106.0 94 67.5 95 29.0 96 29.0 97 19.0 98 9.0 99 7.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5432091.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.70237824521978 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91288597247177 45.31250687078212 2 10.4998345377537 11.907311789438655 3 3.5450419489342084 6.030369284509159 4 1.7161565866946535 3.892406396271422 5 1.015876956868268 2.880131972947367 6 0.6398818026027754 2.1769692002049377 7 0.45726444842461667 1.8149587198865083 8 0.33378876699099197 1.5141293535943008 9 0.2474086607573576 1.2625793517066262 >10 1.5035089336090828 15.588971358986322 >50 0.09224277153608715 3.5484797247931374 >100 0.03490592614053179 3.5066783378291206 >500 0.0010726678852795025 0.41954772036915045 >1k 1.3001933078491326E-4 0.14495991868124786 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.363646890304305E-5 2 0.0 0.0 0.0 0.0 9.204558612880381E-5 3 0.0 0.0 0.0 0.0 9.204558612880381E-5 4 0.0 0.0 0.0 3.681823445152152E-5 1.472729378060861E-4 5 0.0 0.0 0.0 3.681823445152152E-5 1.6568205503184684E-4 6 1.840911722576076E-5 0.0 0.0 3.681823445152152E-5 2.5772764116065063E-4 7 3.681823445152152E-5 0.0 0.0 3.681823445152152E-5 2.761367583864114E-4 8 5.5227351677282285E-5 0.0 0.0 3.681823445152152E-5 2.945458756121722E-4 9 5.5227351677282285E-5 0.0 0.0 5.5227351677282285E-5 3.4977322728945446E-4 10 5.5227351677282285E-5 0.0 0.0 1.1045470335456457E-4 3.6818234451521523E-4 11 5.5227351677282285E-5 0.0 0.0 1.6568205503184684E-4 3.6818234451521523E-4 12 5.5227351677282285E-5 0.0 0.0 1.6568205503184684E-4 3.86591461740976E-4 13 5.5227351677282285E-5 0.0 0.0 2.0250028948336836E-4 3.86591461740976E-4 14 5.5227351677282285E-5 0.0 0.0 2.0250028948336836E-4 4.6022793064401905E-4 15 5.5227351677282285E-5 0.0 0.0 2.2090940670912914E-4 4.970461650955405E-4 16 5.5227351677282285E-5 0.0 0.0 2.761367583864114E-4 5.338643995470621E-4 17 5.5227351677282285E-5 0.0 0.0 2.761367583864114E-4 5.338643995470621E-4 18 5.5227351677282285E-5 0.0 0.0 2.945458756121722E-4 5.890917512243444E-4 19 5.5227351677282285E-5 0.0 1.840911722576076E-5 3.1295499283793296E-4 5.890917512243444E-4 20 5.5227351677282285E-5 0.0 1.840911722576076E-5 3.6818234451521523E-4 6.443191029016266E-4 21 5.5227351677282285E-5 0.0 1.840911722576076E-5 5.338643995470621E-4 6.443191029016266E-4 22 5.5227351677282285E-5 0.0 1.840911722576076E-5 8.284102751592343E-4 6.627282201273874E-4 23 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.001086137916319885 8.284102751592343E-4 24 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.00169363878476999 8.46819392384995E-4 25 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.002245912301542813 8.652285096107558E-4 26 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.0039579602035385636 9.020467440622773E-4 27 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.016844342261571096 9.020467440622773E-4 28 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.05916690276359509 9.204558612880381E-4 29 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.12464813273562611 9.204558612880381E-4 30 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.21279098601256863 9.204558612880381E-4 31 5.5227351677282285E-5 0.0 1.840911722576076E-5 0.5968603986936154 9.388649785137988E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3870 0.0 20.45995 37 GGTATCA 3865 0.0 15.60414 1 TCTTATA 6710 0.0 15.549925 37 TATACCG 220 1.8189894E-12 15.136364 5 TCGTTAC 705 0.0 14.170213 23 CGTTACG 560 0.0 13.875001 24 CTCGTTA 775 0.0 13.367743 22 ATTATAC 380 0.0 13.144737 3 GTACTAG 410 0.0 13.085366 1 TATACTG 755 0.0 12.986754 5 TACGGAT 1315 0.0 12.9429655 27 TAGACAG 850 0.0 12.841177 5 CTCTTAT 10195 0.0 12.793036 37 TACACCG 320 0.0 12.71875 5 GTCTAGG 490 0.0 12.459184 1 TACTTAC 790 0.0 12.177215 31 GTTACGG 1140 0.0 11.846491 25 GTCTTAC 485 0.0 11.824742 1 TTACGGA 1460 0.0 11.657535 26 GTATCAA 5160 0.0 11.652132 2 >>END_MODULE