SRR2727619.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727619.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1140191
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	9643	0.8457354951933492	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	8417	0.7382096508392015	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6411	0.5622742154603921	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4769	0.4182632558930916	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2043	0.1791805057222869	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1850	0.162253517173877	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1791	0.1570789455450885	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1666	0.14611587006036708	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1524	0.13366181630972354	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2755	0.0	24.039928	1
CGGTTTG	60	3.7262536E-5	21.583332	14
CAATCTA	55	5.1430584E-4	20.181818	9
CGTACAC	50	0.0070348475	18.5	3
ATTGGAC	65	0.0015799231	17.076923	3
CTTATAC	1250	0.0	16.576	37
TTCGTTA	80	3.3825354E-4	16.1875	22
AGTATCG	80	3.3825354E-4	16.1875	5
GTATCAA	4180	0.0	15.888756	2
GGCGTGT	100	1.09335124E-4	14.8	8
GGCGGGT	130	4.4435947E-6	14.230769	33
TCTTATA	1985	0.0	14.073048	37
TATCGGA	80	0.00629858	13.875	2
GTCGGTT	80	0.00629858	13.875	12
ATAGTAC	120	3.3003136E-5	13.874999	3
CGTTATG	95	0.0012450629	13.631579	24
GCTAGAC	95	0.0012450629	13.631579	3
TATCGTA	110	2.456332E-4	13.454545	7
CTTGTTA	770	0.0	13.214285	22
CGGGTTT	140	9.557889E-6	13.214285	35