##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727619.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1140191 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.638319369298653 31.0 31.0 34.0 30.0 34.0 2 31.87834757509926 31.0 31.0 34.0 30.0 34.0 3 31.971874010582436 33.0 31.0 34.0 30.0 34.0 4 35.706398313966695 37.0 35.0 37.0 33.0 37.0 5 35.314523619288344 37.0 35.0 37.0 33.0 37.0 6 35.33105506007327 37.0 35.0 37.0 33.0 37.0 7 35.28750007674153 37.0 35.0 37.0 32.0 37.0 8 35.24710859847166 37.0 35.0 37.0 32.0 37.0 9 37.074182308051896 39.0 37.0 39.0 33.0 39.0 10 36.83199393785778 39.0 37.0 39.0 33.0 39.0 11 36.95333413436872 39.0 37.0 39.0 33.0 39.0 12 36.85024438887871 39.0 37.0 39.0 33.0 39.0 13 36.981067207160905 39.0 37.0 39.0 33.0 39.0 14 37.97271071250343 39.0 37.0 41.0 33.0 41.0 15 37.98154256611392 40.0 37.0 41.0 33.0 41.0 16 37.89663135386966 39.0 37.0 41.0 33.0 41.0 17 37.87325895398227 39.0 37.0 41.0 33.0 41.0 18 37.891207701165854 39.0 37.0 41.0 33.0 41.0 19 37.96882452150561 40.0 37.0 41.0 33.0 41.0 20 37.836809797656706 39.0 37.0 41.0 33.0 41.0 21 37.81714905660543 39.0 37.0 41.0 33.0 41.0 22 37.72437951185371 39.0 37.0 41.0 32.0 41.0 23 37.63792031335101 39.0 37.0 40.0 32.0 41.0 24 37.549464081018 39.0 36.0 41.0 32.0 41.0 25 37.50580648329973 39.0 36.0 41.0 32.0 41.0 26 37.349351994534246 39.0 36.0 40.0 32.0 41.0 27 37.14448193329012 39.0 36.0 40.0 31.0 41.0 28 37.011505966982725 39.0 36.0 40.0 31.0 41.0 29 36.92099218464275 39.0 36.0 40.0 31.0 41.0 30 36.863503570892945 39.0 35.0 40.0 31.0 41.0 31 36.75794230966566 39.0 35.0 40.0 31.0 41.0 32 36.611476498235824 38.0 35.0 40.0 30.0 41.0 33 36.56659191310929 38.0 35.0 40.0 30.0 41.0 34 36.531840717914804 38.0 35.0 40.0 30.0 41.0 35 36.41030757127534 38.0 35.0 40.0 30.0 41.0 36 36.29738263150647 38.0 35.0 40.0 30.0 41.0 37 36.16360767625775 38.0 35.0 40.0 30.0 41.0 38 36.08255371249203 38.0 35.0 40.0 30.0 41.0 39 35.92913204892864 38.0 35.0 40.0 29.0 41.0 40 35.86925699290733 38.0 35.0 40.0 29.0 41.0 41 35.794299376157156 38.0 35.0 40.0 28.0 41.0 42 35.69248047037733 38.0 35.0 40.0 27.0 41.0 43 34.447130349213424 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 3.0 12 1.0 13 0.0 14 0.0 15 1.0 16 7.0 17 10.0 18 40.0 19 81.0 20 181.0 21 390.0 22 698.0 23 1255.0 24 2140.0 25 3496.0 26 5611.0 27 8331.0 28 12398.0 29 17695.0 30 23906.0 31 32108.0 32 41611.0 33 54727.0 34 72949.0 35 97883.0 36 134312.0 37 189577.0 38 271347.0 39 169428.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.75335535888286 19.469545014826465 14.231299843622692 24.54579978266799 2 17.530659336900573 22.22285564436134 37.3479531061024 22.89853191263569 3 19.446917227026 24.210329672835513 32.33502106226062 24.00773203787786 4 14.559315062125556 16.905237806648184 35.340131609528584 33.19531552169768 5 14.006425239280084 37.21095851484532 34.69734456770839 14.085271678166203 6 32.359402942138644 35.3262742821159 16.41496907097144 15.899353704774025 7 26.30261070294363 32.813537381017746 22.780218402004575 18.10363351403405 8 25.26296032857653 36.377677073402616 21.031388600681815 17.32797399733904 9 26.921015864885796 15.345499131285898 21.157332411850298 36.57615259197801 10 16.58397584264391 28.032584014432672 33.862484443395886 21.520955699527537 11 33.15260337960921 23.46983970229549 22.526839801401696 20.850717116693605 12 20.22020871941631 26.31962539609592 31.687848790246548 21.772317094241227 13 29.81009322122346 21.440004350148353 25.799712504308488 22.950189924319698 14 20.867205582222628 22.719965339140547 28.63546546148847 27.777363617148353 15 24.689547628423657 28.644499035687883 25.00440715634486 21.661546179543603 16 21.50227461890157 27.558452925869435 28.28990932221005 22.64936313301894 17 21.964828699752935 27.19710995789302 27.659839447952137 23.178221894401904 18 21.5696317546797 26.77726801913013 29.088284331309406 22.56481589488077 19 23.69067989485972 26.08580492215778 29.900428963217568 20.323086219764935 20 22.460710530077854 25.70157105256926 29.691955119800106 22.14576329755278 21 22.019644077176544 26.82094491186126 30.683981894261574 20.47542911670062 22 22.60559853568393 25.83672384714491 29.00207070569755 22.555606911473607 23 21.428778160851998 26.691580621141547 29.87639790175506 22.0032433162514 24 21.099885896310354 25.93495300348801 30.366315819016286 22.598845281185344 25 21.639444619366405 26.296120562256675 29.547417932609537 22.517016885767386 26 21.217059247091058 26.296909903691574 30.237039232900454 22.248991616316914 27 22.156112440810354 27.437245163310358 29.092581856899415 21.314060538979874 28 21.036650876914482 27.778679186206524 28.31411579288032 22.87055414399868 29 21.21100762942349 27.799377472721677 29.96173448132813 21.027880416526703 30 23.10630411922213 26.554849143696103 28.625554841250285 21.71329189583149 31 21.728026269282953 26.66816349190618 30.022426067211544 21.581384171599318 32 21.09848262264831 27.493990042019277 29.314386800106295 22.093140535226116 33 21.124706299207766 26.034497728889285 29.619160298581555 23.2216356733214 34 21.55726540553293 26.69026505208338 30.52128985406831 21.23117968831538 35 21.539461370945745 26.42530944376863 29.498654172853495 22.536575012432127 36 21.18706427256486 26.30541725026772 30.14547562645206 22.362042850715362 37 20.505160977415187 26.117817102573166 30.893771306737207 22.483250613274443 38 21.359491523788556 25.400130329041364 30.44928437428466 22.79109377288542 39 19.873424715683598 25.905659665792836 31.92149385497693 22.299421763546633 40 21.371770168331448 25.127719829397005 31.451747996607587 22.048762005663963 41 20.164516295953923 25.984769218490587 31.40403669209808 22.44667779345741 42 19.84360515036516 26.357864603386627 31.128030303694732 22.670499942553484 43 19.118638894711502 26.01257157791984 30.688805647474855 24.179983879893808 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3250.0 1 2781.5 2 2313.0 3 3485.5 4 4658.0 5 4658.0 6 5083.0 7 5508.0 8 4964.0 9 4420.0 10 5802.5 11 7185.0 12 7185.0 13 10792.0 14 14399.0 15 17072.0 16 19745.0 17 18031.5 18 16318.0 19 16318.0 20 18777.5 21 21237.0 22 17660.5 23 14084.0 24 15643.0 25 17202.0 26 17202.0 27 19749.0 28 22296.0 29 24902.0 30 27508.0 31 31397.5 32 35287.0 33 35287.0 34 38794.0 35 42301.0 36 45853.5 37 49406.0 38 53105.0 39 56804.0 40 56804.0 41 60553.0 42 64302.0 43 68473.5 44 72645.0 45 78463.5 46 84282.0 47 84282.0 48 89268.0 49 94254.0 50 96921.5 51 99589.0 52 95713.5 53 91838.0 54 91838.0 55 83181.5 56 74525.0 57 67477.5 58 60430.0 59 53903.5 60 47377.0 61 47377.0 62 40574.0 63 33771.0 64 27705.0 65 21639.0 66 17459.5 67 13280.0 68 13280.0 69 10499.0 70 7718.0 71 6088.0 72 4458.0 73 3519.5 74 2581.0 75 2581.0 76 2073.5 77 1566.0 78 1247.0 79 928.0 80 737.5 81 547.0 82 547.0 83 426.0 84 305.0 85 229.5 86 154.0 87 106.0 88 58.0 89 58.0 90 38.5 91 19.0 92 11.0 93 3.0 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1140191.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.46320580141692 #Duplication Level Percentage of deduplicated Percentage of total 1 87.19673161882022 57.95374318792567 2 7.098276215626948 9.435483859090334 3 2.1458256001630804 4.278553454327634 4 1.0388109649261204 2.7617082780261293 5 0.5827168871631763 1.9364616197743612 6 0.3852271608507212 1.5362059243150212 7 0.2862697939714709 1.3318485762018564 8 0.19939439718600058 1.06019126846581 9 0.13957420083408917 0.8348893951143929 >10 0.8483568879036467 10.17833472755804 >50 0.05671100519734943 2.543290299800495 >100 0.019855033386197353 2.277942713234909 >500 7.942002250544033E-4 0.3220770424874757 >1k 0.0010589336334058711 1.396429635455805 >5k 3.9710011252720164E-4 2.1528400182220757 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9643 0.8457354951933492 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8417 0.7382096508392015 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6411 0.5622742154603921 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4769 0.4182632558930916 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2043 0.1791805057222869 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1850 0.162253517173877 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1791 0.1570789455450885 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1666 0.14611587006036708 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1524 0.13366181630972354 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 8.770460387777135E-5 0.0 3 0.0 0.0 0.0 8.770460387777135E-5 0.0 4 0.0 0.0 0.0 8.770460387777135E-5 0.0 5 0.0 0.0 0.0 8.770460387777135E-5 0.0 6 0.0 0.0 0.0 8.770460387777135E-5 0.0 7 0.0 0.0 0.0 8.770460387777135E-5 0.0 8 0.0 0.0 0.0 8.770460387777135E-5 0.0 9 0.0 0.0 0.0 8.770460387777135E-5 0.0 10 0.0 0.0 0.0 1.754092077555427E-4 0.0 11 0.0 0.0 0.0 1.754092077555427E-4 0.0 12 0.0 0.0 0.0 1.754092077555427E-4 0.0 13 0.0 0.0 0.0 2.631138116333141E-4 0.0 14 8.770460387777135E-5 0.0 0.0 2.631138116333141E-4 0.0 15 8.770460387777135E-5 0.0 0.0 3.508184155110854E-4 0.0 16 8.770460387777135E-5 0.0 0.0 7.016368310221708E-4 0.0 17 8.770460387777135E-5 0.0 0.0 0.0011401598504110276 0.0 18 8.770460387777135E-5 0.0 0.0 0.0013155690581665702 0.0 19 8.770460387777135E-5 0.0 0.0 0.0013155690581665702 0.0 20 8.770460387777135E-5 0.0 0.0 0.0017540920775554272 0.0 21 8.770460387777135E-5 0.0 0.0 0.0028065473240886834 0.0 22 8.770460387777135E-5 0.0 0.0 0.00456063940164411 0.0 23 8.770460387777135E-5 0.0 0.0 0.00517457162878851 0.0 24 8.770460387777135E-5 0.0 0.0 0.007279482121855023 0.0 25 8.770460387777135E-5 0.0 0.0 0.010086029445943705 0.0 26 8.770460387777135E-5 0.0 0.0 0.016400760925143244 0.0 27 8.770460387777135E-5 0.0 0.0 0.053324399157684985 0.0 28 8.770460387777135E-5 0.0 0.0 0.14015195699667862 0.0 29 8.770460387777135E-5 0.0 0.0 0.26811297405434703 0.0 30 8.770460387777135E-5 0.0 0.0 0.4271214208847465 0.0 31 8.770460387777135E-5 0.0 0.0 0.931335188578054 8.770460387777135E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2755 0.0 24.039928 1 CGGTTTG 60 3.7262536E-5 21.583332 14 CAATCTA 55 5.1430584E-4 20.181818 9 CGTACAC 50 0.0070348475 18.5 3 ATTGGAC 65 0.0015799231 17.076923 3 CTTATAC 1250 0.0 16.576 37 TTCGTTA 80 3.3825354E-4 16.1875 22 AGTATCG 80 3.3825354E-4 16.1875 5 GTATCAA 4180 0.0 15.888756 2 GGCGTGT 100 1.09335124E-4 14.8 8 GGCGGGT 130 4.4435947E-6 14.230769 33 TCTTATA 1985 0.0 14.073048 37 TATCGGA 80 0.00629858 13.875 2 GTCGGTT 80 0.00629858 13.875 12 ATAGTAC 120 3.3003136E-5 13.874999 3 CGTTATG 95 0.0012450629 13.631579 24 GCTAGAC 95 0.0012450629 13.631579 3 TATCGTA 110 2.456332E-4 13.454545 7 CTTGTTA 770 0.0 13.214285 22 CGGGTTT 140 9.557889E-6 13.214285 35 >>END_MODULE