SRR2727617.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727617.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5736845
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	56228	0.9801206063611619	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	22634	0.3945374156003866	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	19958	0.3478915675776494	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16379	0.28550536052481806	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	8261	0.14399900990875647	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	9350	18.163635	37
TATACAC	3260	16.96779	37
TCTTATA	14710	13.268186	37
TAGACAG	665	12.796992	5
TCGTTAC	500	12.21	23
TAATACC	670	12.149253	4
TATACCG	400	12.025001	5
TTAATAC	1095	11.995435	3
ATACCCG	430	11.616279	5
CTCTTAT	21060	11.542735	37
GTAATAC	435	11.482758	3
GGACCGT	355	11.464789	6
AACGCAG	36485	11.393586	5
TGTGCGA	390	11.384616	10
ACCCGTT	525	11.276191	7
CCTAGAC	545	11.201835	3
GAGTACT	20530	11.0567465	11
CTATACT	755	11.02649	4
TTATACA	5035	10.949355	36
GGAGTGT	1420	10.943663	6