##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727617.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5736845 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28192673847733 33.0 31.0 34.0 30.0 34.0 2 32.42535923491048 34.0 31.0 34.0 31.0 34.0 3 32.4972313179108 34.0 31.0 34.0 30.0 34.0 4 36.01217986541383 37.0 35.0 37.0 35.0 37.0 5 35.93248763039615 37.0 35.0 37.0 35.0 37.0 6 35.99981418358 37.0 35.0 37.0 35.0 37.0 7 35.934639510044285 37.0 35.0 37.0 35.0 37.0 8 35.91240063135748 37.0 35.0 37.0 35.0 37.0 9 37.67099616601111 39.0 37.0 39.0 35.0 39.0 10 37.58820414356671 39.0 37.0 39.0 35.0 39.0 11 37.681007243528455 39.0 37.0 39.0 35.0 39.0 12 37.58576848424526 39.0 37.0 39.0 35.0 39.0 13 37.626442582987686 39.0 37.0 39.0 35.0 39.0 14 38.86297032602415 40.0 38.0 41.0 36.0 41.0 15 38.84122335534602 40.0 38.0 41.0 36.0 41.0 16 38.8242408501537 40.0 38.0 41.0 35.0 41.0 17 38.81937336637124 40.0 38.0 41.0 35.0 41.0 18 38.833825037978194 40.0 38.0 41.0 35.0 41.0 19 38.87014744166872 40.0 38.0 41.0 35.0 41.0 20 38.79455118623564 40.0 38.0 41.0 35.0 41.0 21 38.75950352502116 40.0 38.0 41.0 35.0 41.0 22 38.70165308632184 40.0 38.0 41.0 35.0 41.0 23 38.62327899742803 40.0 38.0 41.0 34.0 41.0 24 38.56025637785228 40.0 38.0 41.0 34.0 41.0 25 38.474099788298275 40.0 38.0 41.0 34.0 41.0 26 38.31475506136213 40.0 38.0 41.0 34.0 41.0 27 38.204646282059215 40.0 38.0 41.0 34.0 41.0 28 38.11691408779564 40.0 38.0 41.0 34.0 41.0 29 37.94024380996872 40.0 37.0 41.0 33.0 41.0 30 37.87290976137581 40.0 37.0 41.0 33.0 41.0 31 37.71052625615648 40.0 37.0 41.0 33.0 41.0 32 37.57825494675209 40.0 37.0 41.0 33.0 41.0 33 37.44246079508859 40.0 37.0 41.0 32.0 41.0 34 37.34582579797781 40.0 36.0 41.0 32.0 41.0 35 37.23756664159481 40.0 36.0 41.0 32.0 41.0 36 37.14637331146301 40.0 36.0 41.0 31.0 41.0 37 37.007656647512704 40.0 36.0 41.0 31.0 41.0 38 36.87733972244326 40.0 36.0 41.0 31.0 41.0 39 36.74653559578479 39.0 36.0 41.0 30.0 41.0 40 36.602645007839676 39.0 35.0 41.0 30.0 41.0 41 36.450789589051126 39.0 35.0 41.0 30.0 41.0 42 36.2298395720993 39.0 35.0 41.0 29.0 41.0 43 34.74165259824869 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 13.0 11 29.0 12 26.0 13 17.0 14 29.0 15 34.0 16 67.0 17 111.0 18 251.0 19 507.0 20 1070.0 21 2169.0 22 3946.0 23 6960.0 24 10856.0 25 17241.0 26 24919.0 27 36113.0 28 49889.0 29 66492.0 30 85715.0 31 107790.0 32 135403.0 33 175292.0 34 232762.0 35 313845.0 36 455791.0 37 773570.0 38 1430141.0 39 1805791.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.38475242053777 17.93492764751357 13.731798575697967 24.94852135625069 2 17.76218461541143 21.54607628408995 35.525327945935445 25.16641115456318 3 19.8654835541138 22.639952796354095 30.661783611026618 26.832780038505483 4 14.831967745337376 15.587888464826921 32.97176409681628 36.60837969301942 5 15.755733334262997 36.04026254849138 33.17142087680598 15.032583240439648 6 35.519105013295636 33.98157000929954 14.684186168529914 15.815138808874913 7 28.84531480282281 30.242197584212228 21.214430579874477 19.69805703309049 8 27.604702584783098 34.50616148771668 19.633613946341587 18.255521981158633 9 26.16364918347977 14.419598228643096 19.69171208216363 39.72504050571351 10 16.45522931158154 27.478239345842532 32.944222826309584 23.122308516266347 11 35.3100528252027 21.519946939476313 21.535774454425734 21.634225780895246 12 21.45151211162233 26.088067570241137 29.893242714418815 22.567177603717724 13 32.14991863994931 19.51722593167499 24.377580359936516 23.955275068439185 14 22.161815422937174 20.76873263963032 27.520876021576317 29.54857591585619 15 25.804619089412384 27.927963889559503 22.922686598644376 23.344730422383734 16 23.874620980695834 25.535533904088396 25.74486499112317 24.844980124092597 17 23.5778202130265 26.588272822431147 26.879809372573256 22.954097591969106 18 23.732277933254252 25.064769921446374 27.476252190881922 23.726699954417455 19 24.777364561880265 25.6741815405506 27.235876165383587 22.31257773218555 20 24.036957596030568 25.62370083207756 26.974443269776334 23.364898302115535 21 23.531592713416522 26.426023363015734 26.99727812063948 23.045105802928266 22 23.92178976423452 26.03676759612644 26.37610045242638 23.66534218721266 23 23.33259831841369 25.71017693523182 26.751393841039807 24.20583090531468 24 23.407831307975027 25.958850204249895 26.749650722653307 23.883667765121768 25 23.7394770121905 25.615159551983712 26.585082915783847 24.06028052004194 26 23.25560477928199 25.847726407110528 27.394813699864645 23.501855113742835 27 24.05498144014698 26.076423539419313 27.024854253513908 22.843740766919794 28 23.69680547408898 26.288543615872488 26.85720112710035 23.157449782938183 29 23.273297430904965 26.434878404419155 27.368527474596227 22.923296690079653 30 23.172301151591164 26.541121470076323 27.20847434434781 23.078103033984707 31 23.06339111480265 25.622323768552224 27.181159679231353 24.133125437413767 32 22.60646749214943 25.948809842343657 27.20303581498193 24.241686850524985 33 23.371731326190613 25.65235769835162 26.931039621952486 24.044871353505282 34 23.329879053730753 25.472938522829185 27.470761367964446 23.726421055475612 35 22.89653982284688 25.392214710350373 27.791320839241777 23.919924627560967 36 22.681212408562544 24.846670948927503 28.276134356078998 24.195982286430954 37 22.054805385189944 24.277717107573938 28.421597585432412 25.24587992180371 38 21.884415562909577 24.151114419162447 29.311930163704965 24.65253985422301 39 21.630478076364273 23.73431738176646 29.97874267127663 24.656461870592633 40 21.74200279073254 24.07990803307393 30.24727005871694 23.93081911747659 41 21.31493878604006 23.773310940072463 30.535756151682676 24.3759941222048 42 20.70097762794707 24.5028408471904 30.38286723800277 24.413314286859762 43 20.354358536791565 24.09533463079445 30.268030598700157 25.28227623371383 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 753.0 1 1025.5 2 1298.0 3 5094.5 4 8891.0 5 8891.0 6 11937.0 7 14983.0 8 14695.0 9 14407.0 10 20072.0 11 25737.0 12 25737.0 13 38533.0 14 51329.0 15 78762.5 16 106196.0 17 86515.5 18 66835.0 19 66835.0 20 69346.5 21 71858.0 22 62242.0 23 52626.0 24 60726.5 25 68827.0 26 68827.0 27 77391.0 28 85955.0 29 94852.5 30 103750.0 31 113435.5 32 123121.0 33 123121.0 34 136633.0 35 150145.0 36 168371.0 37 186597.0 38 208606.5 39 230616.0 40 230616.0 41 255038.5 42 279461.0 43 308183.0 44 336905.0 45 370423.0 46 403941.0 47 403941.0 48 442393.5 49 480846.0 50 500839.5 51 520833.0 52 528385.5 53 535938.0 54 535938.0 55 496594.0 56 457250.0 57 414179.0 58 371108.0 59 339012.0 60 306916.0 61 306916.0 62 268499.5 63 230083.0 64 194001.0 65 157919.0 66 132138.5 67 106358.0 68 106358.0 69 87913.5 70 69469.0 71 56578.5 72 43688.0 73 35981.0 74 28274.0 75 28274.0 76 23009.5 77 17745.0 78 14617.5 79 11490.0 80 9083.0 81 6676.0 82 6676.0 83 5296.0 84 3916.0 85 3028.0 86 2140.0 87 1638.5 88 1137.0 89 1137.0 90 834.5 91 532.0 92 358.0 93 184.0 94 135.0 95 86.0 96 86.0 97 50.0 98 14.0 99 13.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5736845.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.78975323770191 #Duplication Level Percentage of deduplicated Percentage of total 1 82.30290406936389 45.093558047067 2 9.268406376864801 10.156273965903306 3 3.019252858246315 4.962723571966253 4 1.4817195315066019 3.2473218999491995 5 0.8394866298820537 2.2997632648793855 6 0.5560035364698994 1.8277977937485228 7 0.39091969653725833 1.4992875596323587 8 0.2930383403130969 1.2844398683952234 9 0.22530043371077785 1.1109739650624662 >10 1.4636078992776946 15.001630851563913 >50 0.10986973640359919 4.11128877535622 >100 0.04547877441953128 4.443531177826042 >500 0.0019423801646279448 0.7503998927494634 >1k 0.0018149999979853114 1.7794960634523085 >5k 1.2736842089448335E-4 0.421727255546914 >10k+ 1.2736842089448335E-4 2.009786046901458 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 56228 0.9801206063611619 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22634 0.3945374156003866 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19958 0.3478915675776494 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16379 0.28550536052481806 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 8261 0.14399900990875647 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.22935515949969E-5 1.7431183864998967E-5 2 0.0 0.0 0.0 6.972473545999587E-5 1.7431183864998967E-5 3 0.0 0.0 0.0 8.715591932499483E-5 1.7431183864998967E-5 4 0.0 0.0 0.0 1.045871031899938E-4 3.4862367729997934E-5 5 0.0 0.0 0.0 1.045871031899938E-4 3.4862367729997934E-5 6 0.0 0.0 0.0 1.045871031899938E-4 3.4862367729997934E-5 7 0.0 0.0 0.0 1.045871031899938E-4 3.4862367729997934E-5 8 0.0 0.0 0.0 1.2201828705499277E-4 3.4862367729997934E-5 9 0.0 0.0 0.0 1.2201828705499277E-4 3.4862367729997934E-5 10 0.0 0.0 0.0 1.5688065478499072E-4 3.4862367729997934E-5 11 0.0 0.0 0.0 2.963301257049824E-4 3.4862367729997934E-5 12 1.7431183864998967E-5 0.0 0.0 4.880731482199711E-4 1.045871031899938E-4 13 1.7431183864998967E-5 0.0 0.0 5.403666998149679E-4 1.5688065478499072E-4 14 1.7431183864998967E-5 0.0 0.0 9.064215609799463E-4 1.9174302251498865E-4 15 1.7431183864998967E-5 0.0 0.0 0.001568806547849907 2.4403657410998554E-4 16 1.7431183864998967E-5 0.0 0.0 0.0028587141538598307 2.7889894183998347E-4 17 1.7431183864998967E-5 0.0 0.0 0.004131190576004755 2.963301257049824E-4 18 3.4862367729997934E-5 0.0 0.0 0.004828437930604714 2.963301257049824E-4 19 5.22935515949969E-5 0.0 0.0 0.006658712236429606 2.963301257049824E-4 20 5.22935515949969E-5 0.0 0.0 0.008750454300229481 3.834860450299773E-4 21 5.22935515949969E-5 0.0 0.0 0.012411002911879264 4.183484127599752E-4 22 5.22935515949969E-5 0.0 0.0 0.01974953131904383 4.3577959662497416E-4 23 6.972473545999587E-5 0.0 0.0 0.024543106881918547 4.706419643549721E-4 24 6.972473545999587E-5 0.0 0.0 0.03341557946920302 4.706419643549721E-4 25 6.972473545999587E-5 0.0 0.0 0.04078897024409758 4.880731482199711E-4 26 6.972473545999587E-5 0.0 0.0 0.052938505398001864 5.22935515949969E-4 27 8.715591932499483E-5 0.0 0.0 0.0794513360566653 5.403666998149679E-4 28 8.715591932499483E-5 0.0 0.0 0.18944210624480878 5.403666998149679E-4 29 1.045871031899938E-4 0.0 0.0 0.4284759305855396 5.577978836799669E-4 30 1.045871031899938E-4 0.0 0.0 0.6867886442809593 5.577978836799669E-4 31 1.3944947091999174E-4 0.0 0.0 1.4792625563354074 5.577978836799669E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 9350 0.0 18.163635 37 TATACAC 3260 0.0 16.96779 37 TCTTATA 14710 0.0 13.268186 37 TAGACAG 665 0.0 12.796992 5 TCGTTAC 500 0.0 12.21 23 TAATACC 670 0.0 12.149253 4 TATACCG 400 0.0 12.025001 5 TTAATAC 1095 0.0 11.995435 3 ATACCCG 430 0.0 11.616279 5 CTCTTAT 21060 0.0 11.542735 37 GTAATAC 435 0.0 11.482758 3 GGACCGT 355 0.0 11.464789 6 AACGCAG 36485 0.0 11.393586 5 TGTGCGA 390 0.0 11.384616 10 ACCCGTT 525 0.0 11.276191 7 CCTAGAC 545 0.0 11.201835 3 GAGTACT 20530 0.0 11.0567465 11 CTATACT 755 0.0 11.02649 4 TTATACA 5035 0.0 10.949355 36 GGAGTGT 1420 0.0 10.943663 6 >>END_MODULE