##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727607.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2039964 Sequences flagged as poor quality 0 Sequence length 43 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.13164251918171 34.0 33.0 34.0 31.0 34.0 2 33.31504624591415 34.0 33.0 34.0 31.0 34.0 3 33.4006286385446 34.0 34.0 34.0 31.0 34.0 4 36.60085668178458 37.0 37.0 37.0 35.0 37.0 5 36.57795088540778 37.0 37.0 37.0 35.0 37.0 6 36.61109950959919 37.0 37.0 37.0 35.0 37.0 7 36.61708343872735 37.0 37.0 37.0 35.0 37.0 8 36.59258104554786 37.0 37.0 37.0 35.0 37.0 9 38.260456557076495 39.0 39.0 39.0 37.0 39.0 10 38.362494142053485 39.0 39.0 39.0 37.0 39.0 11 38.465898908019945 39.0 39.0 39.0 37.0 39.0 12 38.44057787294285 39.0 39.0 39.0 37.0 39.0 13 38.482132527828924 39.0 39.0 39.0 37.0 39.0 14 40.063806518154244 41.0 40.0 41.0 38.0 41.0 15 40.08457551211688 41.0 40.0 41.0 38.0 41.0 16 40.07928571288513 41.0 40.0 41.0 38.0 41.0 17 40.07169685347389 41.0 40.0 41.0 38.0 41.0 18 40.04969548482228 41.0 40.0 41.0 38.0 41.0 19 40.08117986395838 41.0 40.0 41.0 38.0 41.0 20 40.05417007358953 41.0 40.0 41.0 38.0 41.0 21 40.01524683768929 41.0 40.0 41.0 38.0 41.0 22 39.99115229484442 41.0 40.0 41.0 38.0 41.0 23 39.946464741534655 41.0 40.0 41.0 38.0 41.0 24 39.952067781588305 41.0 40.0 41.0 38.0 41.0 25 39.90935232190372 41.0 40.0 41.0 38.0 41.0 26 39.84661445005892 41.0 40.0 41.0 38.0 41.0 27 39.813623181585555 41.0 40.0 41.0 38.0 41.0 28 39.777815196738764 41.0 40.0 41.0 38.0 41.0 29 39.727563819753684 41.0 40.0 41.0 37.0 41.0 30 39.661053332313706 41.0 40.0 41.0 37.0 41.0 31 39.60726512820815 41.0 40.0 41.0 37.0 41.0 32 39.537922728048144 41.0 40.0 41.0 37.0 41.0 33 39.44055924516315 41.0 40.0 41.0 36.0 41.0 34 39.39628885607785 41.0 39.0 41.0 36.0 41.0 35 39.35172189313145 41.0 39.0 41.0 36.0 41.0 36 39.328952863874065 41.0 39.0 41.0 35.0 41.0 37 39.229601600812565 41.0 39.0 41.0 35.0 41.0 38 39.19367351580714 41.0 39.0 41.0 35.0 41.0 39 39.12004623611005 41.0 39.0 41.0 35.0 41.0 40 39.06046283169703 41.0 39.0 41.0 35.0 41.0 41 38.9678048240067 41.0 39.0 41.0 35.0 41.0 42 38.85922202548672 41.0 39.0 41.0 35.0 41.0 43 37.657448366735885 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 2.0 15 6.0 16 9.0 17 15.0 18 20.0 19 41.0 20 85.0 21 199.0 22 330.0 23 640.0 24 1004.0 25 1513.0 26 2173.0 27 2878.0 28 4211.0 29 5440.0 30 7300.0 31 9441.0 32 12231.0 33 16592.0 34 24983.0 35 40789.0 36 69549.0 37 139803.0 38 364597.0 39 1336109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.59467716096951 15.261151667382366 11.164853889578444 27.979317282069683 2 19.560688325872416 18.108162693067133 33.208674270722426 29.122474710338025 3 20.288152143861364 18.849695386781335 28.59329870527127 32.26885376408603 4 15.504244192544576 13.418276008792313 31.198246635724946 39.87923316293817 5 17.456974730926625 33.47215931261532 32.40959154181152 16.66127441464653 6 39.71070077707254 30.863779949057925 13.502493181252218 15.92302609261732 7 33.27852844461961 28.124123759046725 18.262283059897136 20.335064736436525 8 29.793859107317576 31.952230529558367 17.860364202505536 20.39354616061852 9 27.96284640317182 12.726253992717517 16.64264663494062 42.66825296917005 10 17.427072242451338 24.6661215590079 31.599038022239608 26.30776817630115 11 39.4427548721448 18.64885850926781 19.512844344311958 22.395542274275428 12 23.800420007411898 22.440935232190373 27.575927810490775 26.182716949906958 13 34.05839514814967 17.146528075985653 21.640921114294173 27.1541556615705 14 24.15606353837617 17.75849965979792 23.267518446403955 34.81791835542196 15 28.30505832455867 24.578031769188083 19.78681976740766 27.330090138845588 16 27.761225198091733 23.118447188283714 21.853915069089457 27.2664125445351 17 27.130576814100642 23.35124541413476 22.82447141224061 26.693706359523993 18 27.264451725618688 22.77844118817783 23.068446305915202 26.88866078028828 19 28.111721579400424 22.7849609110749 22.97221911759227 26.131098391932404 20 27.66955691374946 22.370443792145352 22.80084354429784 27.15915574980735 21 27.29214829281301 22.998690172963837 22.80917702469259 26.89998450953056 22 27.976572135586707 22.545790023745518 22.056712765519393 27.420925075148382 23 27.239353243488612 22.445003931441928 22.52711322356669 27.78852960150277 24 27.262196783864812 22.5204954597238 22.52529946606901 27.69200829034238 25 27.38822841971721 22.02568280616717 22.49647542799775 28.089613346117876 26 26.882092036918298 22.55780003960854 23.06472074997402 27.495387173499143 27 27.621173706986983 22.595202660439107 22.674909949391264 27.108713683182646 28 27.16538134986696 22.944473529925038 22.59770270455753 27.29244241565047 29 27.104497922512362 22.96192481828111 22.82770676345269 27.105870495753848 30 27.082928914431825 22.88231557027477 22.817118341304063 27.217637173989345 31 27.111703932030174 22.251127961081664 22.798735663962695 27.838432442925466 32 26.428456580606323 22.586035832004878 23.082613222586282 27.902894364802517 33 26.860621069783587 22.162547966532742 23.23614534374136 27.74068561994231 34 26.977534897674666 22.088625093384 23.696447584369135 27.2373924245722 35 26.59399871762443 22.16097931139961 23.781154961558144 27.463867009417815 36 26.382083213233177 21.629156200795702 24.34415509293301 27.64460549303811 37 25.957958081613203 21.285228562856993 24.43013700241769 28.326676353112113 38 25.575990556696098 20.972330884270505 25.450105982262432 28.00157257677096 39 25.182356159226337 20.729189338635386 26.223207860530874 27.8652466416074 40 25.257357482779106 20.78247459268889 26.46458466914122 27.49558325539078 41 24.810437831255847 20.661590106492074 27.12719440146983 27.40077766078225 42 24.21219197985847 20.938702839854038 27.15949889311772 27.68960628716977 43 23.846940436203777 20.570657129243457 27.294403234566882 28.28799919998588 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 29.0 2 35.0 3 176.0 4 317.0 5 317.0 6 434.5 7 552.0 8 535.5 9 519.0 10 663.0 11 807.0 12 807.0 13 1231.0 14 1655.0 15 2646.0 16 3637.0 17 3130.5 18 2624.0 19 2624.0 20 2854.5 21 3085.0 22 2855.0 23 2625.0 24 3389.0 25 4153.0 26 4153.0 27 5479.0 28 6805.0 29 8309.0 30 9813.0 31 12472.5 32 15132.0 33 15132.0 34 19240.5 35 23349.0 36 29381.5 37 35414.0 38 43568.0 39 51722.0 40 51722.0 41 61973.5 42 72225.0 43 85554.0 44 98883.0 45 114376.5 46 129870.0 47 129870.0 48 148449.0 49 167028.0 50 180796.5 51 194565.0 52 201593.5 53 208622.0 54 208622.0 55 206188.0 56 203754.0 57 194122.5 58 184491.0 59 173176.5 60 161862.0 61 161862.0 62 146831.0 63 131800.0 64 114341.5 65 96883.0 66 84362.0 67 71841.0 68 71841.0 69 61238.5 70 50636.0 71 43571.0 72 36506.0 73 30814.5 74 25123.0 75 25123.0 76 21226.0 77 17329.0 78 14431.0 79 11533.0 80 9442.5 81 7352.0 82 7352.0 83 5741.0 84 4130.0 85 3170.5 86 2211.0 87 1483.0 88 755.0 89 755.0 90 488.0 91 221.0 92 138.5 93 56.0 94 35.5 95 15.0 96 15.0 97 10.0 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2039964.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.20554647947682 #Duplication Level Percentage of deduplicated Percentage of total 1 84.44485242179347 55.90717601963608 2 8.419289175415022 11.148072816541905 3 2.732393456588771 5.426988059712186 4 1.2760795778720313 3.379341832172718 5 0.7689698615063919 2.545503495363914 6 0.505460117322942 2.0078557974567506 7 0.33892873286173997 1.5707273383695672 8 0.2502619552419889 1.3254983607854594 9 0.19372650078220516 1.1543191966658417 >10 1.0126943119482872 11.700084411823308 >50 0.042390331739711844 1.8954505656108007 >100 0.014210308387906805 1.501382692091264 >500 5.94598831632592E-4 0.2791031007426449 >1k 1.4864970790814594E-4 0.15849631302751224 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.902047291030626E-5 2 0.0 0.0 0.0 0.0 4.902047291030626E-5 3 0.0 0.0 0.0 0.0 4.902047291030626E-5 4 0.0 0.0 0.0 0.0 4.902047291030626E-5 5 0.0 4.902047291030626E-5 0.0 0.0 4.902047291030626E-5 6 0.0 4.902047291030626E-5 0.0 0.0 1.9608189164122504E-4 7 0.0 4.902047291030626E-5 0.0 0.0 1.9608189164122504E-4 8 0.0 4.902047291030626E-5 0.0 0.0 1.9608189164122504E-4 9 0.0 4.902047291030626E-5 0.0 4.902047291030626E-5 2.451023645515313E-4 10 0.0 4.902047291030626E-5 0.0 4.902047291030626E-5 2.451023645515313E-4 11 0.0 4.902047291030626E-5 0.0 4.902047291030626E-5 2.941228374618376E-4 12 0.0 4.902047291030626E-5 0.0 1.470614187309188E-4 4.4118425619275636E-4 13 0.0 4.902047291030626E-5 0.0 1.470614187309188E-4 5.392252020133689E-4 14 0.0 4.902047291030626E-5 0.0 2.451023645515313E-4 7.843275665649002E-4 15 0.0 4.902047291030626E-5 0.0 5.392252020133689E-4 8.333480394752064E-4 16 0.0 4.902047291030626E-5 0.0 8.333480394752064E-4 8.823685123855127E-4 17 0.0 4.902047291030626E-5 0.0 0.0017647370247710255 8.823685123855127E-4 18 0.0 4.902047291030626E-5 0.0 0.0021569008080534755 9.313889852958189E-4 19 4.902047291030626E-5 4.902047291030626E-5 0.0 0.003039269320438988 9.313889852958189E-4 20 4.902047291030626E-5 9.804094582061252E-5 0.0 0.004509883507748176 9.804094582061252E-4 21 4.902047291030626E-5 9.804094582061252E-5 0.0 0.007500132355276858 0.0010784504040267377 22 4.902047291030626E-5 9.804094582061252E-5 0.0 0.011715893025563195 0.001127470876937044 23 4.902047291030626E-5 9.804094582061252E-5 0.0 0.014657121400181572 0.0011764913498473503 24 4.902047291030626E-5 9.804094582061252E-5 0.0 0.021176844297252303 0.0011764913498473503 25 4.902047291030626E-5 9.804094582061252E-5 0.0 0.026618116790296298 0.0011764913498473503 26 4.902047291030626E-5 9.804094582061252E-5 0.0 0.034118249145573154 0.0011764913498473503 27 4.902047291030626E-5 9.804094582061252E-5 0.0 0.056569625738493425 0.0012255118227576566 28 4.902047291030626E-5 9.804094582061252E-5 0.0 0.17343443315666354 0.0012745322956679629 29 4.902047291030626E-5 9.804094582061252E-5 0.0 0.3704967342560947 0.0012745322956679629 30 4.902047291030626E-5 1.470614187309188E-4 0.0 0.6158442011721775 0.0012745322956679629 31 4.902047291030626E-5 1.470614187309188E-4 0.0 1.2536495742081724 0.0012745322956679629 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATAGT 125 4.129106E-10 19.240002 4 ATAAGAC 130 1.3948011E-8 17.076925 3 CTTATAC 2710 0.0 17.066422 37 TATAGAT 120 1.0423355E-7 16.958334 2 GTATAGA 145 2.9831426E-9 16.586206 1 TATACAC 980 0.0 16.42347 37 ATACACA 725 0.0 15.310345 37 GTAGTAC 210 9.094947E-12 14.97619 3 CGTCTAT 75 0.004105856 14.8 1 ATTGGAC 150 8.110328E-8 14.8 3 ACGATCG 80 0.006300828 13.875 5 TAACCGA 80 0.006300828 13.875 5 GTATAAA 160 1.7852835E-7 13.875 1 TCTATAT 80 0.006300828 13.875 3 TATACTG 175 3.5697667E-8 13.742858 5 TACTTAC 165 2.597717E-7 13.454545 31 TATATGG 110 2.4578228E-4 13.454545 2 GTATATG 165 2.597717E-7 13.454545 1 CTATTAC 110 2.4578228E-4 13.454545 1 CCCTATA 195 1.0270014E-8 13.282052 2 >>END_MODULE