SRR2727606.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727606.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3370481
Sequences flagged as poor quality	0
Sequence length	43
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	23761	0.7049735631205161	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	13369	0.39664961766584644	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	11384	0.33775594640646245	No Hit
GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG	9243	0.2742338556425626	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7124	0.21136449070622265	No Hit
TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG	5416	0.160689231002934	No Hit
GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT	5250	0.1557641179404364	No Hit
GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG	4272	0.12674748796981794	No Hit
CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT	4099	0.1216146894167331	No Hit
TATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTA	4050	0.12016089098262235	No Hit
GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAG	3404	0.10099448713699914	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGTTAT	380	0.0	17.039474	9
GGACCGT	510	0.0	16.686274	6
CTAACGG	120	1.938104E-6	15.416667	10
TAGATCG	160	1.0986696E-8	15.03125	5
ACCGTTA	445	0.0	14.966293	8
GACCGTT	465	0.0	14.720429	7
TTAGGAC	715	0.0	14.489511	3
TATCACG	225	2.7284841E-11	13.9777775	2
TAATCCC	505	0.0	13.920793	5
CTTATAC	4245	0.0	13.815077	37
TAGGACC	820	0.0	13.762195	4
AAACCGC	125	4.849811E-5	13.320001	6
CGGTATA	125	4.849811E-5	13.320001	14
CGTTATT	300	0.0	12.95	10
CATATAC	330	0.0	12.893939	3
TATACAC	2060	0.0	12.842233	37
TCGGGTA	305	0.0	12.737705	25
GTCTTAT	310	0.0	12.532257	1
GTCCTAA	635	0.0	12.527559	1
ATTGGAC	345	0.0	12.333334	3