##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727606.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3370481 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.121889427651425 34.0 33.0 34.0 31.0 34.0 2 33.29307359988085 34.0 33.0 34.0 31.0 34.0 3 33.383771930475206 34.0 34.0 34.0 31.0 34.0 4 36.57784541731581 37.0 37.0 37.0 35.0 37.0 5 36.566510239933116 37.0 37.0 37.0 35.0 37.0 6 36.61462325406967 37.0 37.0 37.0 35.0 37.0 7 36.619763469961704 37.0 37.0 37.0 35.0 37.0 8 36.60418646478055 37.0 37.0 37.0 35.0 37.0 9 38.25668443168794 39.0 39.0 39.0 37.0 39.0 10 38.37892603459269 39.0 39.0 39.0 37.0 39.0 11 38.47506720850822 39.0 39.0 39.0 37.0 39.0 12 38.463982440488465 39.0 39.0 39.0 37.0 39.0 13 38.49535363053523 39.0 39.0 39.0 37.0 39.0 14 40.042376147499425 41.0 40.0 41.0 38.0 41.0 15 40.06789387034076 41.0 40.0 41.0 38.0 41.0 16 40.052658062751284 41.0 40.0 41.0 38.0 41.0 17 40.06176863183623 41.0 40.0 41.0 38.0 41.0 18 40.05971462233432 41.0 40.0 41.0 38.0 41.0 19 40.101209886660094 41.0 40.0 41.0 38.0 41.0 20 40.08103798834647 41.0 40.0 41.0 38.0 41.0 21 40.03381090117404 41.0 40.0 41.0 38.0 41.0 22 40.001328000365525 41.0 40.0 41.0 38.0 41.0 23 39.94467644232381 41.0 40.0 41.0 38.0 41.0 24 39.94742234120293 41.0 40.0 41.0 38.0 41.0 25 39.90647180624961 41.0 40.0 41.0 38.0 41.0 26 39.819892769014274 41.0 40.0 41.0 38.0 41.0 27 39.779735889328556 41.0 40.0 41.0 37.0 41.0 28 39.72640373881354 41.0 40.0 41.0 37.0 41.0 29 39.63546953684059 41.0 40.0 41.0 37.0 41.0 30 39.51959853801282 41.0 40.0 41.0 36.0 41.0 31 39.42341167328936 41.0 39.0 41.0 35.0 41.0 32 39.319075229915256 41.0 39.0 41.0 35.0 41.0 33 39.18620932739274 41.0 39.0 41.0 35.0 41.0 34 39.107068100962444 41.0 39.0 41.0 35.0 41.0 35 39.017214160234104 41.0 39.0 41.0 35.0 41.0 36 38.93457729030367 41.0 39.0 41.0 35.0 41.0 37 38.79960486351948 41.0 39.0 41.0 35.0 41.0 38 38.730954721299426 41.0 39.0 41.0 35.0 41.0 39 38.62246545819425 41.0 39.0 41.0 35.0 41.0 40 38.5222331768077 41.0 38.0 41.0 35.0 41.0 41 38.38463708889028 40.0 38.0 41.0 35.0 41.0 42 38.21233497533438 40.0 38.0 41.0 35.0 41.0 43 37.04269924678407 39.0 36.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 4.0 11 6.0 12 6.0 13 4.0 14 5.0 15 4.0 16 11.0 17 27.0 18 32.0 19 68.0 20 166.0 21 307.0 22 646.0 23 1099.0 24 1833.0 25 2946.0 26 4377.0 27 6571.0 28 10029.0 29 14508.0 30 19513.0 31 22607.0 32 26238.0 33 32851.0 34 47386.0 35 70589.0 36 118374.0 37 273470.0 38 594251.0 39 2122549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.72795396265399 16.938680265516997 12.341947632993628 24.991418138835378 2 18.200458628901927 20.545672857968935 34.8187098517986 26.435158661330533 3 20.69707558060704 22.168942652398872 29.347146594210145 27.78683517278394 4 14.8978439575835 14.443517112245996 32.32467413404793 38.33396479612257 5 16.686639088011475 34.77607498751662 32.5385011812854 15.998784743186507 6 36.943658783419934 32.17241100009168 14.147594957514967 16.736335258973423 7 30.420435540209244 29.30290958471506 20.182460604287638 20.09419427078806 8 28.667421652873877 33.39194020082 19.133441191331446 18.807196954974675 9 26.652842724821767 14.401356957656786 19.005061888792728 39.940738428728714 10 17.263500372795455 26.003143171553262 32.30868235127271 24.424674104378575 11 35.6086267805693 20.681291483322408 20.94496304830082 22.76511868780747 12 22.354168440646898 25.068677141333833 28.634726022784285 23.942428395234984 13 33.172921016317844 18.534238881631435 23.437337282126794 24.85550281992392 14 22.838876706321738 19.8882592721929 26.459546871796636 30.813317149688725 15 27.677444257956058 26.126656699741073 22.110345674697466 24.085553367605396 16 25.121725949500977 24.22455429951986 25.145728458341704 25.50799129263746 17 24.847610771281605 25.1066539167555 26.136210232308088 23.909525079654802 18 24.911043853978114 24.15951907161025 26.63050169990574 24.298935374505895 19 25.273277018918073 25.066362931581576 26.545261640697575 23.11509840880278 20 25.0203754300944 24.124212538210422 26.11469994935441 24.74071208234077 21 24.157086184434803 25.647526272956295 26.264708212269998 23.930679330338904 22 24.838531948407365 25.129885022345476 25.249274510077345 24.782308519169817 23 23.964502395948827 24.51955670422115 25.87152990923254 25.644410990597482 24 24.505078058591636 24.897128926108767 25.610736271766555 24.987056743533046 25 24.47543837214926 24.166610047646017 25.36955407848316 25.988397501721565 26 24.090300464533104 24.892708192094837 26.456846960419 24.560144382953055 27 26.00628812326787 24.083446843343726 25.832989416050705 24.077275617337705 28 24.333203480452788 25.25405127636085 26.282836188662685 24.129909054523672 29 24.821917109160385 24.894191659884747 26.45705464590959 23.82683658504528 30 23.80241870522338 25.136234264486284 26.946421000444744 24.11492602984559 31 24.012893115255658 24.66612332186415 26.481294509596705 24.839689053283493 32 23.570819713862797 24.376995449610902 26.349592239208587 25.702592597317715 33 24.2287673480432 24.587529198354773 26.322711802855437 24.860991650746588 34 24.791891721092625 24.54169004364659 26.058891891098035 24.607526344162746 35 24.010816260349785 24.60518246505469 26.682927451601124 24.701073822994406 36 23.548241334100382 24.58174367397413 27.216412138208167 24.65360285371732 37 23.35218623098602 24.203103355277776 26.6799901853771 25.7647202283591 38 23.184049991677746 23.771384559058482 27.830122762893488 25.214442686370287 39 22.712663266756287 23.33806361762609 28.34571682795423 25.60355628766339 40 23.08305550454075 23.70712073439963 28.45409898468498 24.75572477637465 41 22.874717288125936 23.24522820333359 28.933793129229922 24.94626137931055 42 22.05397389868093 23.770405470317144 28.97423246118284 25.201388169819083 43 22.219261879832583 23.46285292811323 28.915635483481438 25.402249708572754 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 421.0 1 540.0 2 659.0 3 2545.0 4 4431.0 5 4431.0 6 5877.5 7 7324.0 8 7253.5 9 7183.0 10 9302.0 11 11421.0 12 11421.0 13 17326.5 14 23232.0 15 35550.5 16 47869.0 17 42811.5 18 37754.0 19 37754.0 20 39803.0 21 41852.0 22 36220.0 23 30588.0 24 33264.0 25 35940.0 26 35940.0 27 39795.0 28 43650.0 29 47690.0 30 51730.0 31 55760.5 32 59791.0 33 59791.0 34 65542.5 35 71294.0 36 79380.5 37 87467.0 38 98825.0 39 110183.0 40 110183.0 41 123135.0 42 136087.0 43 150964.5 44 165842.0 45 187730.5 46 209619.0 47 209619.0 48 240524.0 49 271429.0 50 295435.5 51 319442.0 52 328703.0 53 337964.0 54 337964.0 55 323132.5 56 308301.0 57 265560.5 58 222820.0 59 203723.5 60 184627.0 61 184627.0 62 164568.0 63 144509.0 64 125107.5 65 105706.0 66 93302.0 67 80898.0 68 80898.0 69 71433.0 70 61968.0 71 56120.5 72 50273.0 73 43013.5 74 35754.0 75 35754.0 76 30651.0 77 25548.0 78 21256.0 79 16964.0 80 13516.5 81 10069.0 82 10069.0 83 7807.5 84 5546.0 85 4350.0 86 3154.0 87 2013.5 88 873.0 89 873.0 90 552.5 91 232.0 92 137.0 93 42.0 94 28.0 95 14.0 96 14.0 97 10.5 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3370481.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.449611199548215 #Duplication Level Percentage of deduplicated Percentage of total 1 85.12735161313887 49.75660604235201 2 8.045520962377108 9.405151442975137 3 2.5142042821769777 4.408627883084507 4 1.1963150256576613 2.7969659248747143 5 0.7105874367455768 2.0766779700531264 6 0.4579983504805237 1.6061895309372618 7 0.31902538240091 1.3052836694884267 8 0.23614283049298723 1.1041965303900738 9 0.19859909154853903 1.044723571703603 >10 1.054860954329526 11.315305659115268 >50 0.08372080016129206 3.4005650959245326 >100 0.049457696707104745 5.367320586477106 >500 0.003260628870648109 1.3459590551885945 >1k 0.002598313629700881 2.816749639825748 >5k 2.0378930429026517E-4 0.805002569123686 >10k+ 1.5284197821769887E-4 1.444674828486165 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23761 0.7049735631205161 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13369 0.39664961766584644 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11384 0.33775594640646245 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 9243 0.2742338556425626 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7124 0.21136449070622265 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 5416 0.160689231002934 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 5250 0.1557641179404364 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 4272 0.12674748796981794 No Hit CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT 4099 0.1216146894167331 No Hit TATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTA 4050 0.12016089098262235 No Hit GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAG 3404 0.10099448713699914 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.933871159635672E-5 2 0.0 0.0 0.0 0.0 5.933871159635672E-5 3 0.0 0.0 0.0 0.0 5.933871159635672E-5 4 0.0 0.0 0.0 0.0 5.933871159635672E-5 5 0.0 0.0 0.0 0.0 5.933871159635672E-5 6 0.0 0.0 0.0 0.0 8.900806739453509E-5 7 0.0 0.0 0.0 0.0 8.900806739453509E-5 8 0.0 0.0 0.0 0.0 8.900806739453509E-5 9 0.0 0.0 0.0 0.0 1.1867742319271345E-4 10 5.933871159635672E-5 0.0 0.0 2.0768549058724852E-4 1.1867742319271345E-4 11 5.933871159635672E-5 0.0 0.0 5.043790485690322E-4 1.1867742319271345E-4 12 5.933871159635672E-5 0.0 0.0 0.0010977661645325994 1.7801613478907018E-4 13 5.933871159635672E-5 0.0 0.0 0.0013647903667162046 1.7801613478907018E-4 14 5.933871159635672E-5 0.0 0.0 0.001720822636294345 2.6702420218360524E-4 15 5.933871159635672E-5 0.0 0.0 0.002966935579817836 3.8570162537631867E-4 16 5.933871159635672E-5 0.0 0.0 0.005103129197286678 3.8570162537631867E-4 17 5.933871159635672E-5 0.0 0.0 0.008396427690884476 4.1537098117449704E-4 18 5.933871159635672E-5 0.0 0.0 0.010057911615582464 4.1537098117449704E-4 19 8.900806739453509E-5 0.0 0.0 0.014448976273712862 4.450403369726754E-4 20 1.1867742319271345E-4 0.0 0.0 0.020293839365953997 5.340484043672105E-4 21 1.1867742319271345E-4 0.0 0.0 0.03020340420254557 5.340484043672105E-4 22 1.1867742319271345E-4 0.0 0.0 0.047767662835067164 5.340484043672105E-4 23 1.1867742319271345E-4 0.0 0.0 0.06111887294424742 5.340484043672105E-4 24 1.1867742319271345E-4 0.0 0.0 0.08678286570967171 5.340484043672105E-4 25 1.1867742319271345E-4 0.0 0.0 0.1085898422213328 5.340484043672105E-4 26 1.1867742319271345E-4 0.0 0.0 0.14000969001160368 5.637177601653889E-4 27 1.1867742319271345E-4 0.0 0.0 0.17558324761361954 5.933871159635672E-4 28 1.1867742319271345E-4 0.0 0.0 0.2930145578628095 5.933871159635672E-4 29 1.483467789908918E-4 0.0 0.0 0.4814446365370403 5.933871159635672E-4 30 1.483467789908918E-4 0.0 0.0 0.7086228938836919 5.933871159635672E-4 31 1.483467789908918E-4 0.0 0.0 1.2251663783299773 5.933871159635672E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTTAT 380 0.0 17.039474 9 GGACCGT 510 0.0 16.686274 6 CTAACGG 120 1.938104E-6 15.416667 10 TAGATCG 160 1.0986696E-8 15.03125 5 ACCGTTA 445 0.0 14.966293 8 GACCGTT 465 0.0 14.720429 7 TTAGGAC 715 0.0 14.489511 3 TATCACG 225 2.7284841E-11 13.9777775 2 TAATCCC 505 0.0 13.920793 5 CTTATAC 4245 0.0 13.815077 37 TAGGACC 820 0.0 13.762195 4 AAACCGC 125 4.849811E-5 13.320001 6 CGGTATA 125 4.849811E-5 13.320001 14 CGTTATT 300 0.0 12.95 10 CATATAC 330 0.0 12.893939 3 TATACAC 2060 0.0 12.842233 37 TCGGGTA 305 0.0 12.737705 25 GTCTTAT 310 0.0 12.532257 1 GTCCTAA 635 0.0 12.527559 1 ATTGGAC 345 0.0 12.333334 3 >>END_MODULE