##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727604.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3373461 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.13428226975204 34.0 33.0 34.0 31.0 34.0 2 33.31367548046354 34.0 33.0 34.0 31.0 34.0 3 33.40210721274086 34.0 34.0 34.0 31.0 34.0 4 36.60140550016734 37.0 37.0 37.0 35.0 37.0 5 36.58196167081819 37.0 37.0 37.0 35.0 37.0 6 36.61228898155337 37.0 37.0 37.0 35.0 37.0 7 36.618707612152626 37.0 37.0 37.0 35.0 37.0 8 36.59641863356357 37.0 37.0 37.0 35.0 37.0 9 38.263330745486606 39.0 39.0 39.0 37.0 39.0 10 38.365856015528266 39.0 39.0 39.0 37.0 39.0 11 38.469422056457745 39.0 39.0 39.0 37.0 39.0 12 38.44591266951063 39.0 39.0 39.0 37.0 39.0 13 38.482889530959454 39.0 39.0 39.0 37.0 39.0 14 40.06629304444308 41.0 40.0 41.0 38.0 41.0 15 40.08570130201594 41.0 40.0 41.0 38.0 41.0 16 40.07894088593287 41.0 40.0 41.0 38.0 41.0 17 40.07298617058267 41.0 40.0 41.0 38.0 41.0 18 40.053839365565516 41.0 40.0 41.0 38.0 41.0 19 40.0852018149906 41.0 40.0 41.0 38.0 41.0 20 40.05686326298125 41.0 40.0 41.0 38.0 41.0 21 40.01591985204512 41.0 40.0 41.0 38.0 41.0 22 39.98904448576699 41.0 40.0 41.0 38.0 41.0 23 39.947071864770336 41.0 40.0 41.0 38.0 41.0 24 39.95059465634848 41.0 40.0 41.0 38.0 41.0 25 39.9094037251357 41.0 40.0 41.0 38.0 41.0 26 39.84328616812229 41.0 40.0 41.0 38.0 41.0 27 39.812161753166855 41.0 40.0 41.0 38.0 41.0 28 39.767235785444086 41.0 40.0 41.0 38.0 41.0 29 39.71432958614313 41.0 40.0 41.0 37.0 41.0 30 39.64198904330004 41.0 40.0 41.0 37.0 41.0 31 39.58343552808229 41.0 40.0 41.0 37.0 41.0 32 39.50864912918809 41.0 40.0 41.0 36.0 41.0 33 39.40718686239444 41.0 40.0 41.0 36.0 41.0 34 39.34982085164168 41.0 39.0 41.0 36.0 41.0 35 39.29907237700392 41.0 39.0 41.0 35.0 41.0 36 39.26852303909842 41.0 39.0 41.0 35.0 41.0 37 39.164044582107216 41.0 39.0 41.0 35.0 41.0 38 39.12264051666819 41.0 39.0 41.0 35.0 41.0 39 39.04703685621384 41.0 39.0 41.0 35.0 41.0 40 38.98109241517836 41.0 39.0 41.0 35.0 41.0 41 38.88690309447775 41.0 39.0 41.0 35.0 41.0 42 38.77170863988053 41.0 38.0 41.0 35.0 41.0 43 37.588060155430874 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 3.0 13 3.0 14 1.0 15 1.0 16 6.0 17 23.0 18 54.0 19 88.0 20 149.0 21 312.0 22 565.0 23 1037.0 24 1728.0 25 2525.0 26 3779.0 27 4931.0 28 6810.0 29 9385.0 30 12549.0 31 16433.0 32 21014.0 33 28357.0 34 44131.0 35 71065.0 36 119738.0 37 237470.0 38 588510.0 39 2202791.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.79619002561464 16.71944628973034 11.349679157399478 27.134684527255537 2 19.247028496846415 19.16260481446206 33.93022773940472 27.6601389492868 3 19.524221563551496 20.32716548375689 29.421594024653018 30.72701892803859 4 14.706528399172244 14.174908202584824 33.13831106984785 37.98025232839508 5 16.60745448072469 34.34203033620368 33.13718463026547 15.913330552806155 6 37.664819602183044 32.930245821724334 14.120898388924608 15.284036187168015 7 32.16622335340471 29.111704566912138 19.46185238246418 19.260219697218968 8 29.029118759635875 32.5288479694889 18.48816393608819 19.953869334787033 9 27.734661820605012 13.138465214211756 17.808387291271487 41.318485673911745 10 16.8135632811525 25.201180627254914 32.3311281796351 25.65412791195748 11 38.11370577575967 19.72469816606743 20.587106238963486 21.57448981920941 12 23.08528244435018 23.617614076463312 28.32992585359665 24.967177625589862 13 32.93074975522172 18.07490882509091 22.67762988811787 26.31671153156951 14 23.383285000182305 18.9382061923941 24.25589031561355 33.42261849181004 15 27.26487722846062 26.019627913291426 20.416154210764553 26.299340647483398 16 26.792424753094817 24.25488244861879 22.76907899631862 26.18361380196777 17 26.218533429021413 24.567261930699658 23.700318456327196 25.513886183951733 18 26.228878887291124 23.689142989944155 24.062557711501633 26.019420411263088 19 27.06780958783872 23.6682445713764 23.98925020920651 25.27469563157837 20 26.260152407275495 23.70387563395575 24.02117587842278 26.01479608034597 21 26.29065520544035 23.93186107679917 23.92771103623252 25.84977268152796 22 26.822838621818956 23.719764360696626 23.250365129461997 26.20703188802242 23 26.247346567812702 23.493112859463917 23.577625471288982 26.6819151014344 24 26.15281457233387 23.900380054786464 23.460149680105978 26.48665569277368 25 26.11166988443026 23.384500369205394 23.695634839116266 26.808194907248073 26 25.649147863277506 23.78109603164228 24.108208157734744 26.46154794734547 27 26.537760478037242 23.835817280828206 23.584710183399185 26.041712057735367 28 25.968226696558816 23.739328837653673 24.028527378855127 26.26391708693238 29 26.010972114395276 24.023636259615866 23.75071180606505 26.21467981992381 30 25.702535170852727 24.176713470231313 23.87103333935089 26.249718019565073 31 26.10494089008292 23.258694853742195 23.960259211533792 26.676105044641098 32 25.36012718095748 23.872456210402312 24.07142101242611 26.695995596214097 33 25.818736306718826 23.17456760282689 24.453046885676162 26.553649204778118 34 26.03441984359683 23.163955356235036 24.717641614946785 26.08398318522135 35 25.606491374881763 23.5957077909008 24.672969392561527 26.124831441655914 36 25.45000520237228 22.879647934272842 25.03174039954812 26.63860646380676 37 25.369909419436006 22.655842175142975 24.981495265544794 26.99275313987623 38 24.664491452546805 22.550193999574915 26.097559746503663 26.687754801374613 39 24.61303094952039 22.129943105908147 26.388270088197256 26.86875585637421 40 24.434697777742205 22.14766970775711 27.023226294894176 26.39440621960651 41 24.14813747661526 21.921966787225344 27.505431365591598 26.424464370567797 42 23.6714460312421 22.151641889442327 27.433932095257656 26.742979984057914 43 23.295630214785348 21.764769179190154 27.671255129376032 27.268345476648463 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 114.0 1 135.5 2 157.0 3 515.5 4 874.0 5 874.0 6 1160.5 7 1447.0 8 1381.0 9 1315.0 10 1744.5 11 2174.0 12 2174.0 13 3369.0 14 4564.0 15 7229.0 16 9894.0 17 8880.0 18 7866.0 19 7866.0 20 9045.0 21 10224.0 22 10334.5 23 10445.0 24 13485.0 25 16525.0 26 16525.0 27 21467.0 28 26409.0 29 31974.5 30 37540.0 31 47396.5 32 57253.0 33 57253.0 34 68282.0 35 79311.0 36 91335.5 37 103360.0 38 120614.5 39 137869.0 40 137869.0 41 152362.0 42 166855.0 43 180851.0 44 194847.0 45 210290.5 46 225734.0 47 225734.0 48 244478.5 49 263223.0 50 275295.5 51 287368.0 52 289703.5 53 292039.0 54 292039.0 55 285562.5 56 279086.0 57 266385.0 58 253684.0 59 236742.5 60 219801.0 61 219801.0 62 198451.0 63 177101.0 64 156962.5 65 136824.0 66 120346.0 67 103868.0 68 103868.0 69 89447.5 70 75027.0 71 67303.0 72 59579.0 73 50747.5 74 41916.0 75 41916.0 76 36925.5 77 31935.0 78 27415.5 79 22896.0 80 19431.0 81 15966.0 82 15966.0 83 12924.0 84 9882.0 85 7881.0 86 5880.0 87 3955.0 88 2030.0 89 2030.0 90 1250.5 91 471.0 92 269.5 93 68.0 94 45.5 95 23.0 96 23.0 97 19.0 98 15.0 99 8.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3373461.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.05024686417759 #Duplication Level Percentage of deduplicated Percentage of total 1 83.30703532515683 45.02765824847489 2 8.399402137006133 9.079795180333646 3 2.7889621743227377 4.522322820509923 4 1.3534501560541994 2.9261726021235663 5 0.8211290170915646 2.219111304056929 6 0.5628859962130098 1.8254476231021028 7 0.4025240112761039 1.5229565524762692 8 0.3167308043364565 1.3695502531100003 9 0.23777195610674984 1.1566469632453402 >10 1.587863573904567 16.324225939923334 >50 0.14503678838404546 5.422748278239223 >100 0.07450870162282053 7.305887532736128 >500 0.002313735878977788 0.8352980820991989 >1k 3.305336964885002E-4 0.30666006976845583 >5k 5.508894941475003E-5 0.15551854980101415 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5223 0.15482615628282054 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.928629380923627E-5 2 0.0 0.0 0.0 0.0 5.928629380923627E-5 3 0.0 0.0 0.0 0.0 5.928629380923627E-5 4 0.0 0.0 0.0 0.0 8.892944071385441E-5 5 0.0 0.0 0.0 0.0 8.892944071385441E-5 6 0.0 0.0 0.0 0.0 1.1857258761847255E-4 7 0.0 0.0 0.0 0.0 1.1857258761847255E-4 8 0.0 0.0 0.0 0.0 1.4821573452309067E-4 9 0.0 0.0 0.0 2.9643146904618137E-5 2.371451752369451E-4 10 2.9643146904618137E-5 0.0 0.0 1.7785888142770882E-4 2.371451752369451E-4 11 2.9643146904618137E-5 0.0 0.0 2.9643146904618134E-4 2.371451752369451E-4 12 2.9643146904618137E-5 0.0 0.0 3.8536090976003576E-4 2.667883221415632E-4 13 2.9643146904618137E-5 0.0 0.0 4.44647203569272E-4 2.667883221415632E-4 14 5.928629380923627E-5 0.0 0.0 6.817923788062172E-4 4.150040566646539E-4 15 8.892944071385441E-5 2.9643146904618137E-5 0.0 0.0010671532885662529 4.742903504738902E-4 16 8.892944071385441E-5 2.9643146904618137E-5 0.0 0.0017193025204678518 5.039334973785083E-4 17 8.892944071385441E-5 2.9643146904618137E-5 0.0 0.0028160989559387227 5.039334973785083E-4 18 8.892944071385441E-5 2.9643146904618137E-5 0.0 0.003290389306412613 5.632197911877446E-4 19 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.004387185741883484 5.632197911877446E-4 20 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.006076845115446718 5.928629380923627E-4 21 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.009545093303287039 5.928629380923627E-4 22 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.014910502893022922 5.928629380923627E-4 23 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.01811196275872168 7.114355257108353E-4 24 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.024929886546783853 7.114355257108353E-4 25 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.0302360098427105 7.410786726154534E-4 26 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.03770608286267427 7.410786726154534E-4 27 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.059523438984473216 7.410786726154534E-4 28 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.15488544257662976 7.410786726154534E-4 29 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.3191084764282142 7.410786726154534E-4 30 1.1857258761847255E-4 2.9643146904618137E-5 0.0 0.5199704398539067 7.410786726154534E-4 31 1.7785888142770882E-4 2.9643146904618137E-5 0.0 1.0172638723257805 7.410786726154534E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3655 0.0 16.804379 37 CTATACG 90 4.4500608E-5 16.444445 35 TATACCG 130 2.593115E-7 15.653846 5 ACCGCTA 475 0.0 14.800001 8 TCTATAC 190 4.5656634E-10 14.605264 3 CCGCTAC 535 0.0 14.177569 9 CGGTTAC 80 0.006301955 13.875 28 CGCTACG 475 0.0 13.63158 10 CCCTATA 665 0.0 13.631578 2 ATTATAC 435 0.0 13.609196 3 TCGACGT 125 4.8498132E-5 13.320001 26 TAATCGA 410 0.0 13.085366 20 TATACAC 1230 0.0 13.085365 37 AACGGAT 170 3.737423E-7 13.058824 32 TATACGT 85 0.009409663 13.058824 36 TCTTATA 5545 0.0 12.978359 37 ACTATAC 230 5.7661964E-10 12.869565 3 ATAACAC 245 1.1459633E-10 12.836734 3 TCGCTAA 145 1.3737261E-5 12.75862 14 TTATACA 2050 0.0 12.453658 37 >>END_MODULE