##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727602.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3030899 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.11845429359408 34.0 33.0 34.0 31.0 34.0 2 33.29284281660326 34.0 33.0 34.0 31.0 34.0 3 33.383609945432035 34.0 34.0 34.0 31.0 34.0 4 36.596515753246806 37.0 37.0 37.0 35.0 37.0 5 36.56914994528026 37.0 37.0 37.0 35.0 37.0 6 36.60095239069332 37.0 37.0 37.0 35.0 37.0 7 36.604399882675075 37.0 37.0 37.0 35.0 37.0 8 36.581155624123404 37.0 37.0 37.0 35.0 37.0 9 38.23874401621433 39.0 39.0 39.0 37.0 39.0 10 38.32832601812201 39.0 39.0 39.0 37.0 39.0 11 38.43774206926724 39.0 39.0 39.0 37.0 39.0 12 38.41098400177637 39.0 39.0 39.0 37.0 39.0 13 38.45360897872215 39.0 39.0 39.0 37.0 39.0 14 40.02533802677028 41.0 40.0 41.0 38.0 41.0 15 40.04440035778163 41.0 40.0 41.0 38.0 41.0 16 40.04689004813423 41.0 40.0 41.0 38.0 41.0 17 40.040357332923335 41.0 40.0 41.0 38.0 41.0 18 40.02289848655465 41.0 40.0 41.0 38.0 41.0 19 40.05502393844203 41.0 40.0 41.0 38.0 41.0 20 40.030510749450904 41.0 40.0 41.0 38.0 41.0 21 39.99223629688749 41.0 40.0 41.0 38.0 41.0 22 39.96730112088856 41.0 40.0 41.0 38.0 41.0 23 39.92647725971733 41.0 40.0 41.0 38.0 41.0 24 39.93529312590093 41.0 40.0 41.0 38.0 41.0 25 39.896950376769404 41.0 40.0 41.0 38.0 41.0 26 39.83313135805581 41.0 40.0 41.0 38.0 41.0 27 39.80356983192116 41.0 40.0 41.0 38.0 41.0 28 39.77467345497161 41.0 40.0 41.0 38.0 41.0 29 39.71971154433058 41.0 40.0 41.0 38.0 41.0 30 39.6498269985242 41.0 40.0 41.0 37.0 41.0 31 39.58928588514497 41.0 40.0 41.0 37.0 41.0 32 39.51952539494058 41.0 40.0 41.0 37.0 41.0 33 39.420220205292225 41.0 40.0 41.0 36.0 41.0 34 39.37379008670365 41.0 39.0 41.0 36.0 41.0 35 39.329559315569405 41.0 39.0 41.0 36.0 41.0 36 39.299938731049764 41.0 39.0 41.0 36.0 41.0 37 39.20841440113973 41.0 39.0 41.0 35.0 41.0 38 39.17176256945547 41.0 39.0 41.0 35.0 41.0 39 39.09926592737006 41.0 39.0 41.0 35.0 41.0 40 39.044092858257564 41.0 39.0 41.0 35.0 41.0 41 38.944728610224224 41.0 39.0 41.0 35.0 41.0 42 38.83545278150146 40.0 39.0 41.0 35.0 41.0 43 37.64719840548959 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 4.0 13 3.0 14 3.0 15 4.0 16 4.0 17 13.0 18 37.0 19 75.0 20 110.0 21 235.0 22 474.0 23 895.0 24 1407.0 25 2127.0 26 3175.0 27 4504.0 28 6324.0 29 8830.0 30 11862.0 31 15190.0 32 19511.0 33 25467.0 34 37900.0 35 59166.0 36 98482.0 37 206705.0 38 564932.0 39 1963455.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.31292530697988 16.510150948612935 11.399818997597743 26.777104746809442 2 17.902873041958838 19.287841660180693 35.420909769675596 27.388375528184874 3 19.08842887869243 20.583727798253918 29.781691834666873 30.54615148838678 4 14.039563838979788 14.020592570059245 33.990509086577944 37.949334504383025 5 15.726456077883164 35.362016352244005 33.847152280560984 15.064375289311851 6 37.28986020319384 33.75806980041236 14.360194780492522 14.59187521590129 7 31.797034477229364 29.857642897371374 19.669015694683324 18.676306930715935 8 28.82339530284579 33.924720025312624 18.674294326534802 18.57759034530679 9 27.650344006844175 13.215847839205463 17.695343856723696 41.43846429722666 10 15.88324124294475 26.055569651116716 33.43506332609565 24.626125779842877 11 37.75800513313047 19.901323006804255 21.329942040298935 21.010729819766347 12 22.53057591163546 23.587655015888025 29.798089609716456 24.08367946276006 13 32.30077940571428 18.294308058434147 23.586203301396715 25.81870923445486 14 22.978099897093237 18.550601653172873 25.390882375163276 33.080416074570614 15 26.37135054648802 26.419422092257115 21.39810663436822 25.811120726886642 16 25.996379292084626 24.96384736013968 23.28213510248939 25.7576382452863 17 25.328887567682063 25.082920941938347 24.715241253502672 24.872950236876914 18 25.506194696689 24.423248679682168 24.916831606727904 25.153725016900925 19 26.231557039677007 24.326016802275497 24.98483123324136 24.457594924806138 20 25.65430256831389 24.097569730961013 24.90115968892398 25.346968011801117 21 25.418069028364194 24.477555999061664 25.014591380313234 25.08978359226091 22 26.080611726091828 23.976120616358383 24.477984914706823 25.465282742842966 23 25.373032885622383 24.031483728095196 24.696566926182626 25.89891646009979 24 25.354391551813503 24.047551568033114 24.681488891579694 25.916567988573686 25 25.515201925237363 23.7216416647338 24.698117621207437 26.065038788821404 26 25.156826406950543 24.086219963119852 25.084669598030157 25.672284031899444 27 25.7078180434254 24.375738023602896 24.56013875751056 25.35630517546114 28 25.45997078754521 24.52777212305656 24.55284719154284 25.45940989785539 29 25.341821024059197 24.691353951418375 24.659416232609534 25.307408791912895 30 25.347693869046772 24.672019753875006 24.62843532562451 25.35185105145371 31 25.2853691264539 23.926795317164974 24.81844495643042 25.96939059995071 32 24.71563717563667 24.398536539818714 25.032869785499283 25.852956499045334 33 25.112087205809235 23.924980674050833 25.166889427856226 25.79604269228371 34 25.336773016850778 23.786440920664134 25.56172277598165 25.31506328650344 35 25.0018558850031 23.931942304906894 25.603360587073343 25.462841223016667 36 24.85038267523926 23.570828325193286 25.74602452935581 25.832764470211643 37 24.570003817349242 23.226046133506923 25.87549106717182 26.328458981972013 38 24.12482237118426 23.223868561769955 26.550175377008607 26.10113369003718 39 24.06856843464596 22.841176825753678 27.0052878700346 26.08496686956576 40 24.125713195985746 22.911551985071096 27.33126376035625 25.631471058586907 41 23.67970691204161 22.726326413384278 27.774465595851268 25.819501078722844 42 23.202422779511952 22.86390935494716 27.880539734250466 26.05312813129042 43 22.840253007441028 22.496097692466822 27.99542314013103 26.668226159961122 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 392.0 1 446.0 2 500.0 3 1531.5 4 2563.0 5 2563.0 6 2971.5 7 3380.0 8 2976.0 9 2572.0 10 3420.5 11 4269.0 12 4269.0 13 6267.0 14 8265.0 15 12688.5 16 17112.0 17 15093.5 18 13075.0 19 13075.0 20 14063.0 21 15051.0 22 14085.5 23 13120.0 24 15727.0 25 18334.0 26 18334.0 27 22079.0 28 25824.0 29 30325.0 30 34826.0 31 41101.0 32 47376.0 33 47376.0 34 55631.0 35 63886.0 36 74652.0 37 85418.0 38 99342.5 39 113267.0 40 113267.0 41 128637.5 42 144008.0 43 161005.0 44 178002.0 45 197858.0 46 217714.0 47 217714.0 48 237543.5 49 257373.0 50 270295.0 51 283217.0 52 285852.0 53 288487.0 54 288487.0 55 280538.0 56 272589.0 57 255444.5 58 238300.0 59 220266.0 60 202232.0 61 202232.0 62 179664.0 63 157096.0 64 133708.5 65 110321.0 66 93189.5 67 76058.0 68 76058.0 69 62897.0 70 49736.0 71 41123.5 72 32511.0 73 26755.0 74 20999.0 75 20999.0 76 17153.0 77 13307.0 78 11018.5 79 8730.0 80 7106.0 81 5482.0 82 5482.0 83 4300.0 84 3118.0 85 2395.5 86 1673.0 87 1115.5 88 558.0 89 558.0 90 339.0 91 120.0 92 70.0 93 20.0 94 16.0 95 12.0 96 12.0 97 8.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3030899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.50080938247593 #Duplication Level Percentage of deduplicated Percentage of total 1 82.12601000841764 47.223120468373324 2 8.93611700083516 10.276679205690503 3 3.021161622515884 5.211577157098126 4 1.5502288790037546 3.565576610832169 5 0.9245451136459271 2.6581046172627 6 0.6404150248784348 2.209462936272508 7 0.46527442481278053 1.872755920819057 8 0.35233783884082787 1.6207768727535974 9 0.2617603143675981 1.354628694631341 >10 1.6011566389821712 16.965127025369426 >50 0.0916098852320761 3.5536060036203283 >100 0.028807813789182273 2.572081089953814 >500 1.7263040358151617E-4 0.07074205797602086 >1k 3.452608070628948E-4 0.5281169256805011 >5k 5.754346784381581E-5 0.317644413666613 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 9600 0.31673770719512595 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4739 0.15635624941642728 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4569 0.15074735251818025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.299351116615895E-5 2 0.0 0.0 0.0 0.0 3.299351116615895E-5 3 0.0 0.0 0.0 0.0 3.299351116615895E-5 4 0.0 3.299351116615895E-5 0.0 3.299351116615895E-5 3.299351116615895E-5 5 0.0 3.299351116615895E-5 0.0 3.299351116615895E-5 3.299351116615895E-5 6 0.0 3.299351116615895E-5 0.0 3.299351116615895E-5 3.299351116615895E-5 7 0.0 3.299351116615895E-5 0.0 3.299351116615895E-5 3.299351116615895E-5 8 0.0 3.299351116615895E-5 0.0 3.299351116615895E-5 3.299351116615895E-5 9 0.0 3.299351116615895E-5 0.0 6.59870223323179E-5 6.59870223323179E-5 10 3.299351116615895E-5 3.299351116615895E-5 0.0 2.3095457816311267E-4 9.898053349847686E-5 11 3.299351116615895E-5 3.299351116615895E-5 0.0 5.608896898247022E-4 9.898053349847686E-5 12 3.299351116615895E-5 3.299351116615895E-5 0.0 9.568118238186096E-4 1.9796106699695372E-4 13 3.299351116615895E-5 3.299351116615895E-5 0.0 0.0011217793796494044 2.639480893292716E-4 14 3.299351116615895E-5 3.299351116615895E-5 0.0 0.001385727468978676 2.639480893292716E-4 15 3.299351116615895E-5 3.299351116615895E-5 0.0 0.0017816496029725835 3.6292862282774846E-4 16 6.59870223323179E-5 3.299351116615895E-5 0.0 0.0025405003597942393 4.2891564516006636E-4 17 6.59870223323179E-5 3.299351116615895E-5 0.0 0.0035962927171113257 4.2891564516006636E-4 18 6.59870223323179E-5 3.299351116615895E-5 0.0 0.003992214851105233 4.6190915632622533E-4 19 6.59870223323179E-5 3.299351116615895E-5 0.0 0.005476922853582386 4.6190915632622533E-4 20 6.59870223323179E-5 3.299351116615895E-5 0.0 0.007720481612881195 5.278961786585432E-4 21 6.59870223323179E-5 3.299351116615895E-5 0.0 0.01161371593048795 5.938832009908611E-4 22 6.59870223323179E-5 3.299351116615895E-5 0.0 0.018344392208384377 5.938832009908611E-4 23 6.59870223323179E-5 3.299351116615895E-5 0.0 0.023359405905640538 6.598702233231791E-4 24 6.59870223323179E-5 3.299351116615895E-5 0.0 0.03154179667484796 6.598702233231791E-4 25 6.59870223323179E-5 3.299351116615895E-5 0.0 0.03741464166242425 6.598702233231791E-4 26 6.59870223323179E-5 3.299351116615895E-5 0.0 0.043815382828659086 6.598702233231791E-4 27 6.59870223323179E-5 3.299351116615895E-5 0.0 0.06275365823803433 6.598702233231791E-4 28 6.59870223323179E-5 3.299351116615895E-5 0.0 0.15701611963975046 6.598702233231791E-4 29 6.59870223323179E-5 3.299351116615895E-5 0.0 0.31360332363434085 6.598702233231791E-4 30 6.59870223323179E-5 3.299351116615895E-5 0.0 0.5045367727529027 6.598702233231791E-4 31 6.59870223323179E-5 3.299351116615895E-5 0.0 1.031014230431301 6.598702233231791E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTACG 20 0.0018424116 37.0 4 CTTATAC 3435 0.0 17.180494 37 GTATACG 80 3.3848523E-4 16.1875 1 TAGACTA 115 1.2437613E-6 16.086956 5 TATACCG 100 1.0943018E-4 14.8 5 TTATACT 490 0.0 14.724489 4 GTCTAAA 300 0.0 14.183333 1 GTACTAG 160 1.7862658E-7 13.875 1 TACTTAC 395 0.0 13.582278 31 TAGGGTG 375 0.0 13.320001 5 GTCTTAG 585 0.0 13.282052 1 TATACTC 210 2.044544E-9 13.214285 5 TCGTTAC 240 8.185452E-11 13.104167 23 TATACAC 1230 0.0 13.085365 37 TAATACC 285 0.0 12.982456 4 ATTATAC 315 0.0 12.920635 3 CTTAGAC 430 0.0 12.906977 3 TAAGACT 490 0.0 12.836734 4 TCTTATA 5220 0.0 12.829501 37 TATTAGG 335 0.0 12.701492 2 >>END_MODULE