##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727600.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1216031 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.13611741805924 34.0 33.0 34.0 31.0 34.0 2 33.306779185728 34.0 33.0 34.0 31.0 34.0 3 33.38865621024464 34.0 34.0 34.0 31.0 34.0 4 36.58657550670994 37.0 37.0 37.0 35.0 37.0 5 36.56965406309543 37.0 37.0 37.0 35.0 37.0 6 36.61083557902718 37.0 37.0 37.0 35.0 37.0 7 36.6104276946887 37.0 37.0 37.0 35.0 37.0 8 36.58767662995434 37.0 37.0 37.0 35.0 37.0 9 38.24278163961281 39.0 39.0 39.0 37.0 39.0 10 38.35888805466308 39.0 39.0 39.0 37.0 39.0 11 38.46874298434826 39.0 39.0 39.0 37.0 39.0 12 38.44352734428645 39.0 39.0 39.0 37.0 39.0 13 38.48413157230367 39.0 39.0 39.0 37.0 39.0 14 40.03717586147064 41.0 40.0 41.0 38.0 41.0 15 40.06001656207778 41.0 40.0 41.0 38.0 41.0 16 40.04533272589268 41.0 40.0 41.0 38.0 41.0 17 40.047446981203606 41.0 40.0 41.0 38.0 41.0 18 40.043622243182945 41.0 40.0 41.0 38.0 41.0 19 40.08193870057589 41.0 40.0 41.0 38.0 41.0 20 40.06006014649297 41.0 40.0 41.0 38.0 41.0 21 40.018184569307856 41.0 40.0 41.0 38.0 41.0 22 39.99661439552116 41.0 40.0 41.0 38.0 41.0 23 39.94837302667448 41.0 40.0 41.0 38.0 41.0 24 39.95932340540661 41.0 40.0 41.0 38.0 41.0 25 39.91616907792647 41.0 40.0 41.0 38.0 41.0 26 39.84179432925641 41.0 40.0 41.0 38.0 41.0 27 39.8188886632002 41.0 40.0 41.0 38.0 41.0 28 39.770211450201515 41.0 40.0 41.0 38.0 41.0 29 39.714660234813095 41.0 40.0 41.0 37.0 41.0 30 39.62884745536915 41.0 40.0 41.0 37.0 41.0 31 39.56420518884798 41.0 40.0 41.0 37.0 41.0 32 39.49042335269414 41.0 40.0 41.0 36.0 41.0 33 39.39044399361529 41.0 39.0 41.0 36.0 41.0 34 39.33564933788695 41.0 39.0 41.0 36.0 41.0 35 39.27787696201824 41.0 39.0 41.0 35.0 41.0 36 39.23977924904875 41.0 39.0 41.0 35.0 41.0 37 39.13796029870949 41.0 39.0 41.0 35.0 41.0 38 39.088120286407175 41.0 39.0 41.0 35.0 41.0 39 39.00798663849852 41.0 39.0 41.0 35.0 41.0 40 38.9430253011642 41.0 39.0 41.0 35.0 41.0 41 38.839479421166075 41.0 39.0 41.0 35.0 41.0 42 38.6924667216543 40.0 38.0 41.0 35.0 41.0 43 37.51017696094919 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 2.0 14 0.0 15 1.0 16 3.0 17 11.0 18 15.0 19 21.0 20 43.0 21 115.0 22 185.0 23 310.0 24 615.0 25 878.0 26 1294.0 27 1792.0 28 2677.0 29 3566.0 30 4833.0 31 6135.0 32 7926.0 33 10320.0 34 15567.0 35 24746.0 36 41641.0 37 87855.0 38 223717.0 39 781760.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.27499710122522 15.783068030338043 12.145825229784437 26.796109638652304 2 18.97089794585829 19.047458494067996 34.185148240464265 27.79649531960945 3 20.31757414079082 19.94159688363208 29.596613902112693 30.14421507346441 4 15.310218242791507 13.480577386596229 31.371815356680877 39.83738901393139 5 17.107705313433623 33.58524577087262 32.71660015246322 16.59044876323054 6 38.83996378381801 31.03193915286699 13.300976702074207 16.82712036124079 7 31.760785703653937 28.840300946275217 18.613259036981788 20.785654313089058 8 29.283546225384054 32.35616526223427 18.371159945757963 19.989128566623712 9 27.110575306057168 13.530658346703333 17.273737264921703 42.0850290823178 10 17.419374999486035 25.05700923742898 31.69746494949553 25.826150813589454 11 37.913260434972464 19.051899170333648 19.42491597664862 23.609924418045264 12 23.311658995535474 23.533363869835554 27.57881994784672 25.576157186782243 13 34.77271549820687 17.091422833792887 21.747389663585878 26.38847200441436 14 23.471852280081677 18.74401228258161 24.481612722044094 33.30252271529262 15 28.574929422029538 25.206840944021984 20.214862943461146 26.003366690487333 16 26.85762122840618 23.416014887778356 22.850157602890057 26.876206280925402 17 26.47210474075085 23.68656720100063 23.66831108746405 26.173016970784463 18 26.792162370860613 23.04826110518564 23.964356171841015 26.195220352112734 19 27.374795543863602 23.3318887429679 24.103497361498185 25.18981835167031 20 27.24642710588793 22.550000781230082 23.37571986240482 26.827852250477168 21 26.447845490781074 24.04280811920091 23.627522653616563 25.881823736401454 22 27.003505667207495 23.71000410351381 22.406172211070277 26.880318018208417 23 26.20607533853989 22.993246060338922 23.19620141262846 27.604477188492726 24 26.348341448532153 23.166514669445103 23.303764459952088 27.181379422070655 25 26.82069782760472 22.21933486893015 22.85402263593609 28.105944667529037 26 25.885442065210505 23.512065070709546 24.185649872412792 26.416842991667156 27 27.406291451451487 22.888232290130762 23.538544658812153 26.166931599605604 28 26.192835544488585 24.062873397142013 23.253765734590647 26.49052532377875 29 26.60639408041407 23.39627854881989 23.505321821565403 26.492005549200638 30 26.186092295344444 23.268074580335536 24.25875656130477 26.287076563015255 31 26.441431180619574 22.89127497572019 24.008269526023597 26.659024317636636 32 25.505188601277435 22.707891492897797 23.776860951735607 28.01005895408916 33 26.00270881252205 22.63215329214469 24.115997042838547 27.249140852494712 34 26.47210474075085 23.007061497609847 24.19642262409429 26.324411137545013 35 25.745642997588053 23.34611535396713 24.195600276637684 26.712641371807134 36 25.700496122220567 22.683303303945376 25.005448051899993 26.61075252193406 37 24.92206201980048 22.461351725408317 24.971567336687965 27.645018918103236 38 24.907342000327297 21.870001669365337 25.955259364276074 27.267396966031292 39 24.232359207947823 21.5693514392314 26.842325565713377 27.355963787107402 40 24.69024227178419 21.632178784915844 27.10342088318472 26.574158060115245 41 24.60364908460393 21.183423777847768 27.517555062329823 26.695372075218476 42 23.3559012887007 21.89245175493059 27.664179613842084 27.08746734252663 43 23.26988374474006 21.640155555244892 27.572323402939563 27.51763729707549 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27.0 1 35.5 2 44.0 3 263.0 4 482.0 5 482.0 6 642.5 7 803.0 8 809.5 9 816.0 10 1111.0 11 1406.0 12 1406.0 13 2150.0 14 2894.0 15 4525.5 16 6157.0 17 5158.5 18 4160.0 19 4160.0 20 4155.0 21 4150.0 22 3280.0 23 2410.0 24 2932.0 25 3454.0 26 3454.0 27 4280.0 28 5106.0 29 6313.5 30 7521.0 31 9094.5 32 10668.0 33 10668.0 34 12898.5 35 15129.0 36 18598.0 37 22067.0 38 27131.0 39 32195.0 40 32195.0 41 38089.5 42 43984.0 43 52055.5 44 60127.0 45 70204.5 46 80282.0 47 80282.0 48 96924.5 49 113567.0 50 119750.5 51 125934.0 52 130194.5 53 134455.0 54 134455.0 55 130376.5 56 126298.0 57 111628.5 58 96959.0 59 89759.5 60 82560.0 61 82560.0 62 74330.5 63 66101.0 64 57269.5 65 48438.0 66 42449.5 67 36461.0 68 36461.0 69 31055.5 70 25650.0 71 22554.5 72 19459.0 73 16418.5 74 13378.0 75 13378.0 76 11484.5 77 9591.0 78 7837.0 79 6083.0 80 4864.5 81 3646.0 82 3646.0 83 2838.0 84 2030.0 85 1558.5 86 1087.0 87 714.0 88 341.0 89 341.0 90 215.5 91 90.0 92 51.0 93 12.0 94 10.5 95 9.0 96 9.0 97 4.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1216031.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.25882226433629 #Duplication Level Percentage of deduplicated Percentage of total 1 85.3500809569058 56.551958443703356 2 8.044676994019573 10.660616462414762 3 2.5764091900964856 5.12129515820417 4 1.2545823856493943 3.325086052268409 5 0.7081442088356639 2.346040063538065 6 0.4520451337403705 1.7971186903176803 7 0.30904262147944644 1.4333760090097838 8 0.23181540486779034 1.2287852567416064 9 0.16653130832801386 0.993075152395793 >10 0.8455572538758832 9.615684747871006 >50 0.03520311373790172 1.5554304971250308 >100 0.022298789795767916 2.8163912452790583 >500 0.0022423274490108967 1.0088172963776736 >1k 0.0013703112188399925 1.5463249247536688 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3334 0.2741706420313298 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 2827 0.23247762598157445 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 1899 0.1561637820088468 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1599 0.13149335831076675 No Hit CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT 1537 0.1263948040798302 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1472 0.12104954561191286 No Hit TATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTA 1394 0.11463523545041203 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 1325 0.10896103799985363 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1236 0.10164214563608986 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.223474566026689E-5 2 0.0 0.0 0.0 0.0 8.223474566026689E-5 3 0.0 0.0 0.0 0.0 8.223474566026689E-5 4 0.0 0.0 0.0 0.0 8.223474566026689E-5 5 1.6446949132053378E-4 0.0 0.0 0.0 8.223474566026689E-5 6 2.4670423698080064E-4 0.0 0.0 0.0 1.6446949132053378E-4 7 2.4670423698080064E-4 0.0 0.0 0.0 1.6446949132053378E-4 8 2.4670423698080064E-4 0.0 0.0 0.0 2.4670423698080064E-4 9 2.4670423698080064E-4 0.0 0.0 0.0 2.4670423698080064E-4 10 2.4670423698080064E-4 0.0 0.0 0.0 2.4670423698080064E-4 11 2.4670423698080064E-4 0.0 0.0 4.111737283013344E-4 2.4670423698080064E-4 12 2.4670423698080064E-4 0.0 0.0 5.756432196218681E-4 2.4670423698080064E-4 13 2.4670423698080064E-4 0.0 0.0 5.756432196218681E-4 2.4670423698080064E-4 14 2.4670423698080064E-4 0.0 0.0 0.0012335211849040034 3.2893898264106756E-4 15 2.4670423698080064E-4 0.0 0.0 0.0018913991501861383 3.2893898264106756E-4 16 2.4670423698080064E-4 0.0 0.0 0.0033716245720709424 3.2893898264106756E-4 17 2.4670423698080064E-4 0.0 0.0 0.006249840670180283 3.2893898264106756E-4 18 2.4670423698080064E-4 0.0 0.0 0.008223474566026689 4.111737283013344E-4 19 3.2893898264106756E-4 0.0 0.0 0.013568733033944036 4.111737283013344E-4 20 3.2893898264106756E-4 0.0 0.0 0.018831756756201117 4.111737283013344E-4 21 3.2893898264106756E-4 0.0 0.0 0.03067356013127955 4.111737283013344E-4 22 4.111737283013344E-4 0.0 0.0 0.04564028384144812 4.111737283013344E-4 23 4.934084739616013E-4 0.0 0.0 0.056413035522943085 4.934084739616013E-4 24 4.934084739616013E-4 0.0 0.0 0.08239921515158742 4.934084739616013E-4 25 4.934084739616013E-4 0.0 0.0 0.10114873716212827 5.756432196218681E-4 26 4.934084739616013E-4 0.0 0.0 0.1316578278020873 6.578779652821351E-4 27 4.934084739616013E-4 0.0 0.0 0.17014368877109218 6.578779652821351E-4 28 4.934084739616013E-4 0.0 0.0 0.3211266818033422 6.578779652821351E-4 29 4.934084739616013E-4 0.0 0.0 0.6018761034874933 6.578779652821351E-4 30 5.756432196218681E-4 0.0 0.0 0.9331176590070484 6.578779652821351E-4 31 6.578779652821351E-4 0.0 0.0 1.571094815839399 6.578779652821351E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGGAC 300 0.0 20.35 3 CGTATAC 55 5.1433296E-4 20.181818 3 TAGGCTC 75 9.266496E-6 19.733334 5 GTATTGG 315 0.0 19.380953 1 TCGATAT 60 9.237236E-4 18.5 37 TATACTG 90 2.1524247E-6 18.5 5 TTGGACC 465 0.0 18.301077 4 TATTGGA 365 0.0 18.246576 2 GTGTTAA 65 0.0015800055 17.076923 1 TAATACT 65 0.0015800055 17.076923 4 GTCTAGC 90 4.4462962E-5 16.444445 1 TAATCCC 350 0.0 16.385715 5 GCTATAC 95 7.0602146E-5 15.578948 32 GTCCATA 110 1.4519268E-5 15.136364 1 TCGCATG 405 0.0 15.074074 12 CTTATAC 1980 0.0 14.949495 37 TAACGAA 75 0.0041045877 14.8 16 TATACAC 740 0.0 14.75 37 ACCCTCG 405 0.0 14.617284 8 CGTTAGG 115 2.2099412E-5 14.478261 1 >>END_MODULE