##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727599.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3209213 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.658030800697865 31.0 31.0 34.0 30.0 34.0 2 31.902601665891297 31.0 31.0 34.0 30.0 34.0 3 32.01659285313876 33.0 31.0 34.0 30.0 34.0 4 35.73578600111616 37.0 35.0 37.0 35.0 37.0 5 35.34841563959762 37.0 35.0 37.0 33.0 37.0 6 35.3654017355657 37.0 35.0 37.0 33.0 37.0 7 35.31796144412976 37.0 35.0 37.0 33.0 37.0 8 35.27480506903094 37.0 35.0 37.0 32.0 37.0 9 37.11583462986096 39.0 37.0 39.0 33.0 39.0 10 36.88192151783007 39.0 37.0 39.0 33.0 39.0 11 37.001250462340764 39.0 37.0 39.0 33.0 39.0 12 36.885201138098346 39.0 37.0 39.0 33.0 39.0 13 37.01657883100935 39.0 37.0 39.0 33.0 39.0 14 38.0614633556576 40.0 37.0 41.0 33.0 41.0 15 38.068592517854064 40.0 37.0 41.0 33.0 41.0 16 38.015697306473584 40.0 37.0 41.0 33.0 41.0 17 37.93138785116476 40.0 37.0 41.0 33.0 41.0 18 37.95518402798443 40.0 37.0 41.0 33.0 41.0 19 38.003640144795625 40.0 37.0 41.0 33.0 41.0 20 37.88605586478679 40.0 37.0 41.0 33.0 41.0 21 37.880112974738665 39.0 37.0 41.0 33.0 41.0 22 37.782461619094775 39.0 37.0 41.0 33.0 41.0 23 37.721255959015494 39.0 37.0 41.0 32.0 41.0 24 37.62471983006426 39.0 37.0 41.0 32.0 41.0 25 37.59817531587962 39.0 37.0 41.0 32.0 41.0 26 37.46367785497566 39.0 36.0 40.0 32.0 41.0 27 37.274130137201865 39.0 36.0 40.0 32.0 41.0 28 37.16690353678612 39.0 36.0 40.0 31.0 41.0 29 37.08487470292561 39.0 36.0 40.0 31.0 41.0 30 37.02830413562453 39.0 36.0 40.0 31.0 41.0 31 36.973862127568346 39.0 36.0 40.0 31.0 41.0 32 36.867623619871914 39.0 36.0 40.0 31.0 41.0 33 36.831042377056306 39.0 35.0 40.0 31.0 41.0 34 36.81996209039413 39.0 35.0 40.0 31.0 41.0 35 36.706359471932835 39.0 35.0 40.0 30.0 41.0 36 36.6182574980221 39.0 35.0 40.0 30.0 41.0 37 36.48892111555076 39.0 35.0 40.0 30.0 41.0 38 36.421115083355325 38.0 35.0 40.0 30.0 41.0 39 36.30620778365288 38.0 35.0 40.0 30.0 41.0 40 36.24720359789145 38.0 35.0 40.0 30.0 41.0 41 36.18374193299105 38.0 35.0 40.0 30.0 41.0 42 36.10460695503851 38.0 35.0 40.0 29.0 41.0 43 34.793985316649284 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 10.0 12 4.0 13 3.0 14 3.0 15 5.0 16 11.0 17 17.0 18 85.0 19 162.0 20 389.0 21 816.0 22 1686.0 23 3094.0 24 5161.0 25 8751.0 26 13907.0 27 21359.0 28 31684.0 29 45355.0 30 62588.0 31 83863.0 32 111250.0 33 147108.0 34 196012.0 35 264339.0 36 366146.0 37 526212.0 38 790219.0 39 528964.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.530396081531514 18.550435885682877 12.94064931184063 25.978518720944983 2 18.056888090631563 20.921297526839137 36.23449113536559 24.787323247163712 3 20.03453806275869 22.888882726076456 30.03842375062048 27.038155460544377 4 14.870624043963426 15.940605999040885 34.163827704798656 35.024942252197036 5 15.342795881731753 35.954702913144125 33.73484402562248 14.967657179501643 6 34.93454625791432 34.13257393635137 15.548297978351702 15.3845818273826 7 28.79338329989315 30.50121634182586 21.644060397362217 19.061339960918765 8 26.144384931757415 35.11181713398269 20.00982795470416 18.733969979555734 9 26.744033506034032 14.976569021750816 19.901358993622424 38.37803847859272 10 17.120490288428968 26.666257428223055 33.20060089498578 23.012651388362194 11 35.02918005130853 21.88963462381587 21.80852439523335 21.27266092964225 12 21.361654710983657 24.92442851253563 30.765891824568826 22.948024951911886 13 30.71912023290445 19.89877268975291 24.730798485485384 24.65130859185726 14 22.046370870366037 20.719503504441743 26.556791337938616 30.677334287253604 15 25.068825285202323 27.40497436598942 23.33064212316228 24.19555822564598 16 23.847155050163387 26.013480563614817 25.71216058267245 24.427203803549343 17 23.613328252129104 26.070846653057934 26.30760251812516 24.008222576687803 18 23.624234352783688 25.4164494534953 27.00590456289439 23.953411630826622 19 24.780623785333038 25.085402558197288 27.45642000079147 22.6775536556782 20 24.171720605643817 25.00519597795472 27.120792543218542 23.70229087318293 21 23.820824607154464 25.460478939852234 27.602343627549807 23.116352825443496 22 24.167046562506133 25.08290973519053 26.811090444915937 23.938953257387404 23 23.66396371945396 25.365627024444937 27.04142729074075 23.928981965360354 24 23.574440213223617 25.100858060839215 27.203429625892706 24.121272100044465 25 23.887788065173613 25.016164399184472 26.958759047779 24.13728848786291 26 23.51243124093041 25.447485099929484 27.232034769895296 23.80804888924481 27 23.882771258872502 25.8445606446191 26.754721484675525 23.517946611832873 28 23.567460308804684 26.02008654458274 26.47783116919943 23.934621977413155 29 23.587496373721535 26.088483375830773 27.116180820656027 23.207839429791665 30 24.18290714888666 25.615376729434914 26.572215680292956 23.629500441385474 31 23.624608276234703 25.31913587536882 27.212684231305307 23.84357161709117 32 23.12647991890847 25.772923143462272 27.035849599263123 24.064747338366136 33 23.225444992276923 25.20521386395979 27.212684231305307 24.35665691245798 34 23.656859173884687 25.22606009635384 27.520579032928012 23.59650169683346 35 23.462169697056567 25.161745262779377 27.370760370221607 24.005324669942443 36 23.35423046086377 24.927856144169926 27.64275852054694 24.075154874419365 37 22.94793147104913 24.621581677501617 27.9813462054404 24.44914064600885 38 22.937305812982807 24.465998361592078 28.248701472915634 24.347994352509478 39 22.358908554838834 24.616190947749494 28.91157427070126 24.11332622671041 40 22.91966909020997 24.323190763592194 28.88150459318219 23.875635553015645 41 22.243335048187827 24.573999918360045 28.97464269277234 24.208022340679786 42 21.90711554515079 24.93524113232746 28.805535812051115 24.352107510470635 43 21.60557744219533 24.54221642502383 28.775341493381713 25.076864639399133 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2250.0 1 2123.5 2 1997.0 3 3788.0 4 5579.0 5 5579.0 6 6536.5 7 7494.0 8 6819.0 9 6144.0 10 8203.5 11 10263.0 12 10263.0 13 16229.5 14 22196.0 15 27010.5 16 31825.0 17 29481.0 18 27137.0 19 27137.0 20 30248.0 21 33359.0 22 29342.5 23 25326.0 24 29200.5 25 33075.0 26 33075.0 27 38823.5 28 44572.0 29 50578.5 30 56585.0 31 64559.0 32 72533.0 33 72533.0 34 82817.0 35 93101.0 36 105177.0 37 117253.0 38 130874.5 39 144496.0 40 144496.0 41 160555.5 42 176615.0 43 192832.5 44 209050.0 45 227286.0 46 245522.0 47 245522.0 48 260639.0 49 275756.0 50 282985.5 51 290215.0 52 284447.0 53 278679.0 54 278679.0 55 264282.5 56 249886.0 57 230411.0 58 210936.0 59 192598.5 60 174261.0 61 174261.0 62 151871.0 63 129481.0 64 108744.0 65 88007.0 66 72749.5 67 57492.0 68 57492.0 69 47000.0 70 36508.0 71 29294.5 72 22081.0 73 17446.5 74 12812.0 75 12812.0 76 10240.0 77 7668.0 78 6079.5 79 4491.0 80 3481.0 81 2471.0 82 2471.0 83 1830.5 84 1190.0 85 899.5 86 609.0 87 408.0 88 207.0 89 207.0 90 139.5 91 72.0 92 43.0 93 14.0 94 9.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3209213.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.15862598240076 #Duplication Level Percentage of deduplicated Percentage of total 1 83.91331064495445 53.837627126146415 2 8.662686092073413 11.11572073968566 3 2.8402251275799264 5.46674824998651 4 1.382766972529533 3.5486571604535575 5 0.7994824872781131 2.5646848940377964 6 0.4982628178241943 1.9180714661831744 7 0.35537932194749267 1.5960454299095859 8 0.25889000301162757 1.3288021499044496 9 0.20592474812561878 1.1890664005960494 >10 1.0180272164389443 11.450021576403032 >50 0.04696205855794924 2.0355963513905966 >100 0.017014208872741222 1.9404663627813845 >500 5.827095315202128E-4 0.24082713777632217 >1k 2.913547646403698E-4 0.41573057133000196 >5k 4.8559127440061624E-5 0.23048372052603075 >10k+ 1.456773823201849E-4 1.1214506628892948 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12975 0.4043047314092271 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12960 0.4038373270954593 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10061 0.31350365338791786 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7398 0.23052380755032462 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.232057516905235E-5 2 0.0 0.0 0.0 0.0 6.232057516905235E-5 3 0.0 0.0 0.0 3.116028758452617E-5 6.232057516905235E-5 4 0.0 0.0 0.0 6.232057516905235E-5 6.232057516905235E-5 5 0.0 0.0 0.0 9.348086275357852E-5 6.232057516905235E-5 6 0.0 0.0 0.0 1.246411503381047E-4 9.348086275357852E-5 7 0.0 0.0 0.0 1.246411503381047E-4 9.348086275357852E-5 8 0.0 0.0 0.0 1.246411503381047E-4 9.348086275357852E-5 9 0.0 0.0 0.0 1.246411503381047E-4 1.8696172550715704E-4 10 0.0 0.0 0.0 1.246411503381047E-4 1.8696172550715704E-4 11 0.0 0.0 0.0 1.5580143792263086E-4 1.8696172550715704E-4 12 0.0 0.0 0.0 2.1812201309168324E-4 2.1812201309168324E-4 13 0.0 0.0 0.0 2.492823006762094E-4 3.1160287584526173E-4 14 0.0 0.0 0.0 3.739234510143141E-4 3.4276316342978793E-4 15 0.0 0.0 0.0 4.674043137678926E-4 3.739234510143141E-4 16 0.0 0.0 0.0 5.920454641059974E-4 4.362440261833665E-4 17 0.0 0.0 0.0 9.348086275357852E-4 4.362440261833665E-4 18 0.0 0.0 0.0 0.00105944977787389 4.985646013524188E-4 19 0.0 0.0 0.0 0.0013398923661346255 4.985646013524188E-4 20 0.0 0.0 0.0 0.001807296679902518 5.608851765214712E-4 21 3.116028758452617E-5 0.0 0.0 0.0028979067453609344 5.920454641059974E-4 22 3.116028758452617E-5 0.0 0.0 0.004861004863186084 6.232057516905235E-4 23 3.116028758452617E-5 0.0 0.0 0.006450179529996918 7.166866144441021E-4 24 3.116028758452617E-5 3.116028758452617E-5 0.0 0.009722009726372167 7.166866144441021E-4 25 3.116028758452617E-5 3.116028758452617E-5 0.0 0.012495275321394996 7.166866144441021E-4 26 3.116028758452617E-5 3.116028758452617E-5 0.0 0.01701351702115129 7.166866144441021E-4 27 3.116028758452617E-5 3.116028758452617E-5 0.0 0.0410692590364055 7.478469020286282E-4 28 3.116028758452617E-5 3.116028758452617E-5 0.0 0.10616309980048068 7.478469020286282E-4 29 3.116028758452617E-5 3.116028758452617E-5 0.0 0.2018875032601451 7.478469020286282E-4 30 3.116028758452617E-5 3.116028758452617E-5 0.0 0.3241916320294103 7.478469020286282E-4 31 3.116028758452617E-5 3.116028758452617E-5 0.0 0.7101741143389361 7.478469020286282E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2820 0.0 17.319149 37 GGTATCA 5970 0.0 16.268847 1 TCGTTAC 580 0.0 14.353448 23 TATACCG 120 3.3039843E-5 13.874999 5 TCTTATA 4215 0.0 13.386713 37 CGTTACG 525 0.0 13.038095 24 CTCTTAT 6580 0.0 12.792552 37 TAATACC 350 0.0 12.685715 4 TACGGAT 1090 0.0 12.220183 27 CTCGTTA 700 0.0 12.157144 22 GGACCGT 215 4.0196028E-8 12.046513 6 GTATCAA 8130 0.0 11.946494 2 ATACCCG 250 2.1500455E-9 11.840001 5 ACGGATG 1145 0.0 11.633187 28 GTATTAG 305 3.092282E-11 11.52459 1 GTAATAC 290 1.5643309E-10 11.4827585 3 GTTACGG 920 0.0 11.461957 25 GGGTAAG 1840 0.0 11.361413 1 TATACGG 115 0.0052219247 11.26087 2 TACTTAC 1085 0.0 11.253456 31 >>END_MODULE