##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727598.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1420484 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.716468471309778 31.0 31.0 34.0 30.0 34.0 2 31.964180518752762 31.0 31.0 34.0 30.0 34.0 3 32.07744191416447 33.0 31.0 34.0 30.0 34.0 4 35.78744075962841 37.0 35.0 37.0 35.0 37.0 5 35.40134348574148 37.0 35.0 37.0 33.0 37.0 6 35.41293742132963 37.0 35.0 37.0 33.0 37.0 7 35.37790499576201 37.0 35.0 37.0 33.0 37.0 8 35.328881564311885 37.0 35.0 37.0 33.0 37.0 9 37.17092343173172 39.0 37.0 39.0 34.0 39.0 10 36.948516843554735 39.0 37.0 39.0 33.0 39.0 11 37.054593363952 39.0 37.0 39.0 33.0 39.0 12 36.9494848234827 39.0 37.0 39.0 33.0 39.0 13 37.07305890105063 39.0 37.0 39.0 33.0 39.0 14 38.13528909864525 40.0 37.0 41.0 33.0 41.0 15 38.13429084734499 40.0 37.0 41.0 33.0 41.0 16 38.08561025678571 40.0 37.0 41.0 33.0 41.0 17 38.008340115059376 40.0 37.0 41.0 33.0 41.0 18 38.0270344474137 40.0 37.0 41.0 33.0 41.0 19 38.07723423847083 40.0 37.0 41.0 33.0 41.0 20 37.956660546686905 40.0 37.0 41.0 33.0 41.0 21 37.94629084171311 40.0 37.0 41.0 33.0 41.0 22 37.85342249543113 39.0 37.0 41.0 33.0 41.0 23 37.78624187248853 39.0 37.0 41.0 33.0 41.0 24 37.69075118058352 39.0 37.0 41.0 32.0 41.0 25 37.670036410125 39.0 37.0 41.0 32.0 41.0 26 37.5362644000214 39.0 37.0 41.0 32.0 41.0 27 37.356070184528654 39.0 36.0 40.0 32.0 41.0 28 37.26238873510719 39.0 36.0 40.0 32.0 41.0 29 37.18137972690998 39.0 36.0 40.0 31.0 41.0 30 37.12784797294443 39.0 36.0 40.0 31.0 41.0 31 37.07881538968408 39.0 36.0 40.0 31.0 41.0 32 36.96938437884552 39.0 36.0 40.0 31.0 41.0 33 36.93293131073634 39.0 36.0 40.0 31.0 41.0 34 36.9231670332084 39.0 36.0 40.0 31.0 41.0 35 36.81958895700339 39.0 35.0 40.0 31.0 41.0 36 36.74140926613746 39.0 35.0 40.0 30.0 41.0 37 36.6106841048544 39.0 35.0 40.0 30.0 41.0 38 36.55660676220218 39.0 35.0 40.0 30.0 41.0 39 36.44955381405211 39.0 35.0 40.0 30.0 41.0 40 36.383728363008665 39.0 35.0 40.0 30.0 41.0 41 36.332495825366564 39.0 35.0 40.0 30.0 41.0 42 36.261167320434446 39.0 35.0 40.0 30.0 41.0 43 34.96744349109177 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 0.0 15 2.0 16 2.0 17 9.0 18 24.0 19 60.0 20 149.0 21 372.0 22 643.0 23 1296.0 24 2171.0 25 3625.0 26 5725.0 27 8886.0 28 13405.0 29 19014.0 30 26136.0 31 35301.0 32 47135.0 33 62541.0 34 83810.0 35 114386.0 36 160359.0 37 233013.0 38 355437.0 39 246982.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.789559051703506 19.31911939874015 13.458863317010259 25.43245823254609 2 17.824910382658306 21.27429805615551 36.84117526138978 24.059616299796406 3 19.705959377226353 23.444614652470566 30.503335482835425 26.34609048746765 4 14.72519225841333 16.581390568285176 34.72386876585727 33.96954840744422 5 14.927658460074172 36.13148757747359 34.22206797119855 14.718785991253686 6 33.71005938820852 34.895570805443775 16.033901121026354 15.36046868532134 7 27.907811703616513 30.751560735636584 22.31781561777535 19.02281194297155 8 25.286310863057942 35.66157732153266 20.38685405819425 18.665257757215144 9 26.11532407264003 15.477048667918822 20.647962243854913 37.759665015586236 10 17.086711289954692 26.920542575629153 33.6505022231859 22.342243911230256 11 34.21629529090085 22.57160235525356 22.288107433804253 20.923994920041338 12 20.826563340382574 25.4329510223276 31.160998645532086 22.57948699175774 13 29.933529698328176 20.581576420431347 25.168745300897438 24.31614858034304 14 21.605311992250527 21.478876214022826 26.984816442846242 29.9309953508804 15 24.669549252226705 28.040160959222348 23.68066095781438 23.609628830736565 16 23.273968590987298 26.615435302333573 26.272383215861634 23.838212890817495 17 22.9674533468874 26.947364419451397 26.734197639677742 23.35098459398346 18 22.976957149816542 26.206771776380442 27.49710661999713 23.319164453805886 19 24.133675564103502 25.71524916859324 28.050157551933 22.100917715370255 20 23.59421155042929 25.71236282844439 27.639030077072324 23.054395544054 21 23.3205724246102 26.111170558767295 28.014465492043556 22.553791524578944 22 23.622300567975422 25.635839615229738 27.433184745481114 23.308675071313722 23 23.121978142661234 26.05295096600877 27.409671633049015 23.41539925828098 24 23.025391345485062 25.9146882330248 27.63586214276261 23.424058278727532 25 23.332892169147982 25.649356134951184 27.48239332509201 23.535358370808822 26 22.87262651321662 25.95544898780979 27.8385395400441 23.333384958929493 27 23.26573196178204 26.457883369330453 27.34912888846337 22.92725578042414 28 23.01792910022218 26.41261710797165 27.151308990456773 23.4181448013494 29 22.95752715271696 26.552851000081663 27.79439965532875 22.69522219187263 30 23.48122189338282 26.07062099960295 27.26831136429555 23.17984574271868 31 23.12028857769605 25.732708006566774 27.826994179448693 23.320009236288477 32 22.692265453183563 26.29512194435136 27.54004972952881 23.47256287293627 33 22.755412943757197 25.74453496132304 27.63924127269297 23.860810822226792 34 23.123808504706847 25.72123304451159 28.011015963572977 23.143942487208584 35 22.847705429980202 25.642879469251323 27.865642978027203 23.643772122741264 36 22.675017810830674 25.248647644042453 28.377510763936797 23.69882378119007 37 22.406306582826698 24.85427502175315 28.66417361969582 24.07524477572433 38 22.26769185714165 24.717631455194145 29.131127136947686 23.883549550716516 39 21.719146431779592 24.89552856631965 29.669183179817583 23.716141822083177 40 22.156954953382087 24.584859808347016 29.64792282067239 23.61026241759851 41 21.56335446228187 24.892853421791447 29.733457047034673 23.810335068892012 42 21.289574539382354 25.266951264498577 29.43109531680751 24.01237887931156 43 20.97088034782511 25.033087313901458 29.39392488757353 24.602107450699904 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1505.0 1 1355.5 2 1206.0 3 1986.0 4 2766.0 5 2766.0 6 3180.0 7 3594.0 8 3266.5 9 2939.0 10 3811.0 11 4683.0 12 4683.0 13 7274.5 14 9866.0 15 12103.0 16 14340.0 17 13470.0 18 12600.0 19 12600.0 20 14696.0 21 16792.0 22 14809.5 23 12827.0 24 14971.0 25 17115.0 26 17115.0 27 20524.5 28 23934.0 29 26837.0 30 29740.0 31 34278.5 32 38817.0 33 38817.0 34 43716.0 35 48615.0 36 54392.5 37 60170.0 38 66210.0 39 72250.0 40 72250.0 41 78767.5 42 85285.0 43 92207.0 44 99129.0 45 105071.0 46 111013.0 47 111013.0 48 115220.5 49 119428.0 50 120352.5 51 121277.0 52 117462.5 53 113648.0 54 113648.0 55 107090.5 56 100533.0 57 92370.0 58 84207.0 59 76711.0 60 69215.0 61 69215.0 62 60171.5 63 51128.0 64 42773.5 65 34419.0 66 28678.0 67 22937.0 68 22937.0 69 18534.0 70 14131.0 71 11456.5 72 8782.0 73 6950.0 74 5118.0 75 5118.0 76 4096.0 77 3074.0 78 2403.5 79 1733.0 80 1330.5 81 928.0 82 928.0 83 688.0 84 448.0 85 323.5 86 199.0 87 130.5 88 62.0 89 62.0 90 41.5 91 21.0 92 14.0 93 7.0 94 4.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1420484.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 73.00122314537256 #Duplication Level Percentage of deduplicated Percentage of total 1 87.40985431395649 63.81026279877643 2 7.463603941093651 10.897044335449193 3 2.1238383850552864 4.651283996163859 4 0.9660447164666953 2.8208978366077355 5 0.5396411337018572 1.969723140989555 6 0.3623218649191725 1.5869963586847229 7 0.2332704117585709 1.1920317767400261 8 0.17302811851047942 1.010501143184598 9 0.11634957402994514 0.7644295094966163 >10 0.5806281334975233 7.517718193458274 >50 0.02331363360845361 1.1347409077880335 >100 0.0071408517367646165 0.8205960063867707 >500 2.8947649953373484E-4 0.17955273710953717 >1k 4.824608325562248E-4 0.7746337583340841 >5k 1.929843330224899E-4 0.8695875008306146 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6601 0.4647007639649584 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5744 0.40436921499995776 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4419 0.3110911492139299 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2880 0.20274779582170585 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 7.039854021587008E-5 0.0 0.0 0.0 0.0 3 7.039854021587008E-5 0.0 0.0 0.0 0.0 4 7.039854021587008E-5 0.0 0.0 0.0 0.0 5 7.039854021587008E-5 0.0 0.0 0.0 0.0 6 7.039854021587008E-5 0.0 0.0 0.0 7.039854021587008E-5 7 7.039854021587008E-5 0.0 0.0 0.0 7.039854021587008E-5 8 1.4079708043174017E-4 0.0 0.0 0.0 7.039854021587008E-5 9 1.4079708043174017E-4 0.0 0.0 0.0 7.039854021587008E-5 10 1.4079708043174017E-4 0.0 0.0 7.039854021587008E-5 7.039854021587008E-5 11 1.4079708043174017E-4 0.0 0.0 1.4079708043174017E-4 7.039854021587008E-5 12 1.4079708043174017E-4 0.0 0.0 1.4079708043174017E-4 7.039854021587008E-5 13 1.4079708043174017E-4 0.0 0.0 1.4079708043174017E-4 7.039854021587008E-5 14 2.1119562064761025E-4 0.0 0.0 2.1119562064761025E-4 1.4079708043174017E-4 15 2.1119562064761025E-4 0.0 0.0 2.8159416086348033E-4 1.4079708043174017E-4 16 2.1119562064761025E-4 0.0 0.0 5.631883217269607E-4 2.1119562064761025E-4 17 2.1119562064761025E-4 0.0 0.0 6.335868619428308E-4 2.1119562064761025E-4 18 2.1119562064761025E-4 0.0 0.0 7.039854021587008E-4 2.1119562064761025E-4 19 2.1119562064761025E-4 0.0 0.0 9.151810228063111E-4 2.1119562064761025E-4 20 2.1119562064761025E-4 0.0 0.0 0.0013375722641015316 2.8159416086348033E-4 21 2.1119562064761025E-4 0.0 0.0 0.0021823547466919726 2.8159416086348033E-4 22 2.1119562064761025E-4 0.0 0.0 0.003379129930361764 2.8159416086348033E-4 23 2.1119562064761025E-4 0.0 0.0 0.0052094919759743865 5.631883217269607E-4 24 2.1119562064761025E-4 0.0 0.0 0.00844782482590441 5.631883217269607E-4 25 2.1119562064761025E-4 0.0 0.0 0.011967751836697915 5.631883217269607E-4 26 2.1119562064761025E-4 0.0 0.0 0.01795162775504687 5.631883217269607E-4 27 2.1119562064761025E-4 0.0 0.0 0.049208579610893186 5.631883217269607E-4 28 2.1119562064761025E-4 0.0 0.0 0.13643237093835622 5.631883217269607E-4 29 2.1119562064761025E-4 0.0 0.0 0.2535051433173482 6.335868619428308E-4 30 2.1119562064761025E-4 0.0 0.0 0.40211646171304993 6.335868619428308E-4 31 2.1119562064761025E-4 0.0 0.0 0.8378834256492858 7.039854021587008E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2375 0.0 19.863157 1 CTTATAC 1420 0.0 17.197184 37 GGTTAGT 115 1.2426226E-6 16.086956 1 CGTAGAC 70 0.0025928973 15.857143 3 GTACTAG 100 1.09365195E-4 14.8 1 GTATTAC 125 2.9597504E-6 14.799999 1 GTATCAA 3290 0.0 14.395136 2 TCTTATA 2235 0.0 13.90604 37 GTCCTAC 205 1.4242687E-9 13.536585 1 GTACTAA 115 3.5780916E-4 12.869565 1 TACGGAT 395 0.0 12.64557 27 GAGTGTC 440 0.0 12.613636 7 TATACTG 220 4.08545E-9 12.613636 5 GGAGTGT 535 0.0 12.448599 6 GCACCCG 605 0.0 12.231405 9 CTAGAGT 215 4.0126906E-8 12.046512 4 TGTATAC 170 5.3104304E-6 11.970589 3 GTATAAT 140 1.398749E-4 11.892858 1 GTAAGGT 140 1.398749E-4 11.892858 4 GTAAGAG 640 0.0 11.8515625 3 >>END_MODULE