##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727594.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9688095 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.665763186673953 31.0 31.0 34.0 30.0 34.0 2 31.865806435630535 31.0 31.0 34.0 30.0 34.0 3 31.92894217077764 31.0 31.0 34.0 30.0 34.0 4 35.637353989613025 37.0 35.0 37.0 33.0 37.0 5 35.52650144326619 37.0 35.0 37.0 33.0 37.0 6 35.57555752704737 37.0 35.0 37.0 33.0 37.0 7 35.493188598997016 37.0 35.0 37.0 33.0 37.0 8 35.470389276736036 37.0 35.0 37.0 33.0 37.0 9 37.101566819895964 39.0 37.0 39.0 33.0 39.0 10 36.9424028150013 39.0 37.0 39.0 33.0 39.0 11 37.0221707157083 39.0 37.0 39.0 33.0 39.0 12 36.85180595359562 39.0 37.0 39.0 32.0 39.0 13 36.88900139810768 39.0 37.0 39.0 33.0 39.0 14 37.96585912916832 40.0 37.0 41.0 33.0 41.0 15 37.96437792982005 40.0 37.0 41.0 33.0 41.0 16 37.8828050302975 40.0 37.0 41.0 33.0 41.0 17 37.85398202639425 40.0 37.0 41.0 32.0 41.0 18 37.77547113235368 40.0 37.0 41.0 32.0 41.0 19 37.77634860104076 40.0 37.0 41.0 32.0 41.0 20 37.68635670892988 40.0 37.0 41.0 32.0 41.0 21 37.57624032382011 39.0 37.0 41.0 32.0 41.0 22 37.475547566368824 39.0 36.0 41.0 32.0 41.0 23 37.356136887592456 39.0 36.0 41.0 31.0 41.0 24 37.22923433347836 39.0 36.0 41.0 31.0 41.0 25 37.48626876594418 39.0 36.0 41.0 32.0 41.0 26 37.41357779831845 39.0 36.0 41.0 31.0 41.0 27 37.34990305111583 39.0 36.0 41.0 31.0 41.0 28 37.26798023760089 39.0 36.0 41.0 31.0 41.0 29 37.183625676668115 39.0 36.0 41.0 31.0 41.0 30 37.06884366844049 39.0 36.0 41.0 31.0 41.0 31 36.958957359522174 39.0 36.0 41.0 30.0 41.0 32 36.83715013116614 39.0 36.0 41.0 30.0 41.0 33 36.74110317869509 39.0 35.0 41.0 30.0 41.0 34 36.62251206248494 39.0 35.0 41.0 30.0 41.0 35 36.475793022260824 39.0 35.0 41.0 30.0 41.0 36 36.38617261701088 39.0 35.0 40.0 30.0 41.0 37 36.30126748344231 39.0 35.0 40.0 29.0 41.0 38 36.18415096053455 39.0 35.0 40.0 29.0 41.0 39 36.03857941112262 39.0 35.0 40.0 28.0 41.0 40 35.895948481099744 38.0 35.0 40.0 27.0 41.0 41 35.782349471180865 38.0 35.0 40.0 27.0 41.0 42 35.61874610023952 38.0 34.0 40.0 27.0 41.0 43 35.46764518721173 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 4.0 13 13.0 14 27.0 15 80.0 16 227.0 17 516.0 18 1019.0 19 2121.0 20 4165.0 21 7719.0 22 13318.0 23 21454.0 24 33248.0 25 49424.0 26 71149.0 27 98220.0 28 133064.0 29 175127.0 30 226547.0 31 283754.0 32 351087.0 33 434557.0 34 543739.0 35 682689.0 36 887504.0 37 1243684.0 38 1941285.0 39 2482350.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.73506762681415 19.601985736101884 12.842772495521565 25.8201741415624 2 20.478680277185557 22.67621240295435 32.55598752902402 24.28911979083607 3 20.745223906247823 23.227156628831573 30.210521263468205 25.8170982014524 4 15.42835820664434 17.32075294472236 33.67655870426539 33.574330144367906 5 15.385119572010803 36.08643391709103 33.36040779946935 15.16803871142882 6 34.34130239226597 35.487244912441504 14.693848481048132 15.477604214244389 7 29.21677584705765 30.75482847763157 20.335659384017188 19.692736291293592 8 27.501598611491733 33.73233850411252 18.971211574618128 19.79485130977762 9 27.133600568532824 13.704500213922344 18.917021354559385 40.24487786298545 10 16.910228481450687 27.823374977227207 32.45073463874993 22.815661902572177 11 36.22596599228228 21.690807119459503 20.457891876576355 21.625335011681862 12 22.09062772402624 26.373471771282176 29.048827452662263 22.48707305202932 13 32.173982604423266 20.10186729176376 23.240100349965605 24.484049753847376 14 22.161807868316732 21.600789422481924 26.006991054484914 30.230411654716434 15 25.8891144234238 27.82575934690979 22.429332082313397 23.855794147353016 16 24.130172133943773 26.28281411361057 24.94882636885786 24.638187383587795 17 24.4220458201535 25.78333511386914 25.306554074872306 24.488064991105063 18 24.496704460474426 24.54194555276347 26.34146341463415 24.619886572127957 19 25.472819991959206 24.519319845645608 26.793234376830533 23.214625785564653 20 25.137976041729566 24.51185707819752 26.919575004167484 23.430591875905428 21 24.800654824297244 24.955411770838335 26.69220316274768 23.55173024211674 22 24.57870200488331 25.324173637851406 26.221295311410554 23.875829045854733 23 24.452815543200185 24.856197219370785 26.187594155507355 24.50339308192168 24 23.760047769969226 25.399534170546428 26.69684803875272 24.14357002073163 25 24.282967910616073 24.942705454477892 26.684688785566202 24.089637849339834 26 23.93504605394559 25.418970396140832 26.514118616714637 24.13186493319894 27 24.73442921441212 25.271139475820583 26.513354792660476 23.481076517106818 28 23.910459176958938 25.355480102125338 26.525111489926555 24.20894923098917 29 24.10742256346578 25.46609008272524 26.446489222081325 23.97999813172765 30 24.040433129526495 25.580333388555747 26.467876295597843 23.91135718631991 31 24.34502345404334 24.840445928740376 26.518990575546585 24.2955400416697 32 23.75468035769674 25.512507876935558 26.338294577004046 24.394517188363658 33 23.91055207447904 24.8771198052868 26.87339461473076 24.338933505503405 34 24.28864498128889 25.34772832017027 26.790457773174193 23.573168925366648 35 24.414159852891615 25.656148086904594 26.486342258204527 23.443349801999258 36 23.941249543898984 25.474265064494105 26.704888835214767 23.879596556392148 37 24.289646210116643 25.564891756325675 25.921380828738776 24.224081204818905 38 23.820792426168406 25.388799346001456 26.801915133986608 23.988493093843527 39 24.12141912316095 25.456181013914502 26.528300971450015 23.894098891474535 40 24.320219816176454 25.19417904139049 26.81249512933141 23.67310601310165 41 24.038121013470658 25.232648936658858 26.774737448383817 23.95449260148667 42 23.78822668439977 25.282792953619882 26.47334692733711 24.45563343464324 43 23.89065136128413 24.961315924338066 26.68427590769909 24.463756806678713 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 266.0 1 688.0 2 1110.0 3 2533.0 4 3956.0 5 3956.0 6 6049.5 7 8143.0 8 7508.5 9 6874.0 10 9977.5 11 13081.0 12 13081.0 13 28183.0 14 43285.0 15 68353.0 16 93421.0 17 83901.0 18 74381.0 19 74381.0 20 88643.0 21 102905.0 22 86245.0 23 69585.0 24 82784.0 25 95983.0 26 95983.0 27 115424.0 28 134865.0 29 161210.5 30 187556.0 31 217825.0 32 248094.0 33 248094.0 34 280579.0 35 313064.0 36 350007.5 37 386951.0 38 425118.5 39 463286.0 40 463286.0 41 515221.5 42 567157.0 43 608931.0 44 650705.0 45 687883.0 46 725061.0 47 725061.0 48 763917.5 49 802774.0 50 812899.0 51 823024.0 52 801359.5 53 779695.0 54 779695.0 55 734452.0 56 689209.0 57 636077.5 58 582946.0 59 521679.0 60 460412.0 61 460412.0 62 406272.0 63 352132.0 64 302660.0 65 253188.0 66 223745.0 67 194302.0 68 194302.0 69 174210.5 70 154119.0 71 139099.0 72 124079.0 73 104338.5 74 84598.0 75 84598.0 76 75604.5 77 66611.0 78 58173.5 79 49736.0 80 40633.0 81 31530.0 82 31530.0 83 25796.0 84 20062.0 85 17594.0 86 15126.0 87 12056.0 88 8986.0 89 8986.0 90 6414.0 91 3842.0 92 2585.0 93 1328.0 94 916.0 95 504.0 96 504.0 97 315.0 98 126.0 99 81.5 100 37.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9688095.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.25002268889423 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7737485308335 43.522513936177994 2 13.186737996396191 14.571351469867865 3 3.7995168937050043 6.297701837521153 4 1.4752986070534049 3.2604112605037865 5 0.751538885842807 2.0761270247200687 6 0.4248214228701843 1.4082835951383605 7 0.2827823518682912 1.0936611949719373 8 0.1901746689269256 0.840572381845247 9 0.13799484774994034 0.6861796622221237 >10 0.8248757856281661 8.57824314773401 >50 0.08210636351180053 3.150129142056509 >100 0.05995256469639223 6.584685508665086 >500 0.006652167403599919 2.5640558816224988 >1k 0.003631314511397245 3.442854543748436 >5k 9.311055670319352E-5 0.3221707125583622 >10k+ 7.448844536255481E-5 1.6010587006465182 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 51557 0.532168604870204 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 51456 0.5311260882557406 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 33996 0.3509048992603809 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18604 0.19202949599482663 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0643893355711315E-5 0.0 0.0 0.0 1.0321946677855657E-5 2 6.296387473491951E-4 0.0 0.0 2.0643893355711315E-5 1.0321946677855657E-5 3 9.186532543291535E-4 0.0 0.0 2.0643893355711315E-5 1.0321946677855657E-5 4 0.0010115507744298544 0.0 0.0 2.0643893355711315E-5 1.0321946677855657E-5 5 0.0036230032839273357 0.0 0.0 1.5482920016783485E-4 1.0321946677855657E-5 6 0.005357090325807086 0.0 0.0 2.683706136242471E-4 2.0643893355711315E-5 7 0.006089948539934838 0.0 0.0 3.096584003356697E-4 2.0643893355711315E-5 8 0.007824035581814588 0.0 0.0 4.4384370714779326E-4 2.0643893355711315E-5 9 0.00848464016919735 0.0 0.0 4.954534405370715E-4 3.096584003356697E-5 10 0.0124069799067825 0.0 0.0 8.257557342284525E-4 3.096584003356697E-5 11 0.013480462361279488 0.0 0.0 8.980093609734422E-4 4.128778671142263E-5 12 0.014120423055306539 0.0 0.0 9.289752010070091E-4 5.160973338927828E-5 13 0.015183583563125672 0.0 0.0 0.0010734824544969884 5.160973338927828E-5 14 0.017320226525441792 0.0 0.0 0.0013934628015105136 9.289752010070091E-5 15 0.018858196580442285 0.0 0.0 0.001537970055000493 1.0321946677855656E-4 16 0.02003489850171783 0.0 0.0 0.0016721553618126164 1.1354141345641223E-4 17 0.020334234955375643 0.0 0.0 0.0017031212018461834 1.1354141345641223E-4 18 0.020860654235946283 0.0 0.0 0.00180634066862474 1.3418530681212355E-4 19 0.021810273330309004 0.0 0.0 0.001981813762148286 1.3418530681212355E-4 20 0.028240846110613078 0.0 0.0 0.0030552962166452745 1.6515114684569052E-4 21 0.04266060561957743 0.0 0.0 0.005130007498894262 1.8579504020140182E-4 22 0.04365151250065157 0.0 0.0 0.005480953685941353 1.8579504020140182E-4 23 0.044683707168437135 0.0 0.0 0.005769968192921312 2.5804866694639143E-4 24 0.04639715031696118 0.0 0.0 0.00627574358013624 2.786925603021027E-4 25 0.04744998887810246 0.0 0.0 0.0065028264070490635 2.890145069799584E-4 26 0.05432440536555432 0.0 0.0 0.008092406195438835 2.890145069799584E-4 27 0.05575915595377626 0.0 0.0 0.00959941041040576 2.890145069799584E-4 28 0.0587525204903544 0.0 0.0 0.013408208734534499 2.890145069799584E-4 29 0.059113788624079344 0.0 0.0 0.021665766076819023 2.890145069799584E-4 30 0.05994986630498565 0.0 0.0 0.03370115590319872 2.9933645365781404E-4 31 0.06150848025334186 0.0 0.0 0.06311870393508734 2.9933645365781404E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 22045 0.0 19.385347 1 CGCTTCG 1430 0.0 15.136364 32 GTATCAA 31085 0.0 13.718032 2 GACCGAT 2535 0.0 13.573965 19 TAAACGC 1595 0.0 13.454545 28 ATCTCCG 1665 0.0 13.444445 10 CACGAGA 1705 0.0 13.129032 21 ACGTCAG 2655 0.0 13.030132 30 GCACGTC 2645 0.0 13.009451 28 GTAAACG 1665 0.0 13.0 27 CGCTACG 1860 0.0 12.830645 10 TATACAC 2670 0.0 12.818352 3 CCGATTT 2700 0.0 12.744444 21 CGATTTG 2740 0.0 12.693431 22 TTGCACG 2735 0.0 12.513711 26 ACCGATT 2765 0.0 12.511754 20 ACGAGAC 1810 0.0 12.469613 22 CGAGACT 1855 0.0 12.466307 23 CCACGAG 1920 0.0 12.429687 20 ACGCTTC 1770 0.0 12.228813 31 >>END_MODULE