##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727590.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10023437 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8567491370475 31.0 31.0 34.0 30.0 34.0 2 32.037836522542115 33.0 31.0 34.0 30.0 34.0 3 32.100899422024604 33.0 31.0 34.0 30.0 34.0 4 35.77095700806021 37.0 35.0 37.0 35.0 37.0 5 35.67361245449041 37.0 35.0 37.0 33.0 37.0 6 35.72442825749292 37.0 35.0 37.0 33.0 37.0 7 35.63662085170985 37.0 35.0 37.0 33.0 37.0 8 35.618415120482126 37.0 35.0 37.0 33.0 37.0 9 37.263551614082076 39.0 37.0 39.0 34.0 39.0 10 37.14279483175282 39.0 37.0 39.0 33.0 39.0 11 37.21092814770024 39.0 37.0 39.0 33.0 39.0 12 37.056724355128885 39.0 37.0 39.0 33.0 39.0 13 37.08919625074712 39.0 37.0 39.0 33.0 39.0 14 38.20155890639109 40.0 37.0 41.0 33.0 41.0 15 38.20018841840379 40.0 37.0 41.0 33.0 41.0 16 38.120031981046026 40.0 37.0 41.0 33.0 41.0 17 38.109054409181205 40.0 37.0 41.0 33.0 41.0 18 38.04989795416483 40.0 37.0 41.0 33.0 41.0 19 38.05642864817727 40.0 37.0 41.0 33.0 41.0 20 37.977257601359696 40.0 37.0 41.0 33.0 41.0 21 37.879305471765825 40.0 37.0 41.0 32.0 41.0 22 37.79042957021628 40.0 37.0 41.0 32.0 41.0 23 37.683249667753685 40.0 37.0 41.0 32.0 41.0 24 37.57099106823338 40.0 37.0 41.0 32.0 41.0 25 37.804939064314965 40.0 37.0 41.0 32.0 41.0 26 37.732951082547835 40.0 37.0 41.0 32.0 41.0 27 37.67524732284944 40.0 37.0 41.0 32.0 41.0 28 37.59769119115529 40.0 37.0 41.0 32.0 41.0 29 37.517754139622966 40.0 37.0 41.0 32.0 41.0 30 37.395604222384 40.0 36.0 41.0 31.0 41.0 31 37.27076540711534 39.0 36.0 41.0 31.0 41.0 32 37.144872761708385 39.0 36.0 41.0 31.0 41.0 33 37.041560694201 39.0 35.0 41.0 31.0 41.0 34 36.93295872463707 39.0 35.0 41.0 30.0 41.0 35 36.789323861665416 39.0 35.0 41.0 30.0 41.0 36 36.67092664921224 39.0 35.0 41.0 30.0 41.0 37 36.57986187771719 39.0 35.0 41.0 30.0 41.0 38 36.45829499402251 39.0 35.0 41.0 30.0 41.0 39 36.30109592148881 39.0 35.0 41.0 30.0 41.0 40 36.154075293734074 39.0 35.0 41.0 29.0 41.0 41 36.016116926758755 39.0 35.0 40.0 28.0 41.0 42 35.83791168638063 38.0 35.0 40.0 27.0 41.0 43 35.65769216686851 38.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 5.0 13 6.0 14 16.0 15 40.0 16 132.0 17 285.0 18 594.0 19 1364.0 20 2843.0 21 5501.0 22 10087.0 23 16759.0 24 26832.0 25 41294.0 26 61293.0 27 87692.0 28 121994.0 29 161875.0 30 211355.0 31 267553.0 32 334936.0 33 419126.0 34 532988.0 35 675907.0 36 890313.0 37 1277082.0 38 1904295.0 39 2971270.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.195213378405036 18.69569290453963 12.7369085075309 25.37218520952444 2 19.696976196887356 22.51060190232153 32.954604293916354 24.83781760687477 3 20.80499932308648 23.288119634013764 30.10359620158235 25.803284841317403 4 15.594600933791472 16.226300419706334 32.86485464017981 35.31424400632238 5 15.640273890083812 36.16248598160492 32.59894784593349 15.598292282377791 6 34.932369006758854 33.91598111506063 14.256018170214467 16.89563170796604 7 29.305736146194167 30.74873419167497 20.36848238782765 19.577047274303215 8 28.077315196374258 33.518622404670175 18.910808737561776 19.49325366139379 9 27.390933868292883 13.999828601706183 19.080999860626648 39.52823766937429 10 17.745819123719738 27.352942907707206 31.637491211846797 23.26374675672626 11 35.572927729280885 21.980234923410006 20.36359384510523 22.083243502203885 12 22.259550291980684 25.960905425953197 28.74918054555538 23.03036373651074 13 32.20174876142784 19.708918208394984 23.663060884205684 24.426272145971488 14 22.687946260349616 21.22983363890051 25.884524440069807 30.19769566068006 15 26.144944094525663 27.353401832126046 22.85137323654551 23.650280836802786 16 23.99797594378056 25.534873916003065 25.388357306979632 25.07879283323674 17 24.34719747328187 25.620882338064277 25.680791927958445 24.35112826069541 18 24.549034428011073 24.11824407136993 26.628869917574182 24.703851583044816 19 25.561611251709373 24.325488352947197 27.402466838470673 22.710433556872758 20 24.74996351052039 24.190434877776955 27.35948756898457 23.70011404271808 21 24.115510478092496 24.954583941616036 27.613831463199702 23.316074117091773 22 24.41031953410791 24.676685252773076 26.73391372639944 24.179081486719575 23 23.92012839508045 24.679917676940555 27.036025666645084 24.36392826133391 24 23.65982846003821 24.97169384114451 27.208242043123533 24.16023565569375 25 24.136501281945506 24.31369599070658 27.085230345638927 24.464572381708987 26 23.73323641381694 25.167903983434027 27.253106893374003 23.845752709375038 27 24.53639405325738 24.899363362088273 27.079882878497664 23.48435970615668 28 23.610374365599345 25.56371631806535 26.837840154030996 23.988069162304306 29 23.734812719429474 25.5504174865368 27.08529020534573 23.629479588687992 30 23.84674039453732 25.352870477461977 27.002723716425812 23.797665411574894 31 23.831017244883167 24.95326702806632 27.213818972474215 24.0018967545763 32 23.422744114618567 25.50467469391986 26.82540928825113 24.247171903210447 33 23.434297038031964 25.27339674006032 27.15209363814029 24.140212583767422 34 24.053565658166953 25.510181786945935 27.007512492970225 23.428740061916887 35 23.83686354291447 25.811256158940292 26.791857922586832 23.560022375558404 36 23.63337046963033 25.629981013498664 26.978879599881754 23.757768916989253 37 23.641481459902426 25.68178958973853 26.7683131045768 23.90841584578224 38 23.61252931504433 25.60639628901743 26.98602285822717 23.795051537711068 39 23.324125247657065 26.063544869888446 26.964253878185694 23.648076004268795 40 23.944940243551187 25.657536431864642 26.968863075609693 23.428660248974477 41 23.526002108857472 25.741210325360452 26.92788910630156 23.804898459480516 42 23.370496567195463 25.796819992982446 26.797404922084112 24.035278517737975 43 23.445301247466315 25.412460815586506 26.769709831068923 24.372528105878253 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1708.0 1 2043.5 2 2379.0 3 5334.5 4 8290.0 5 8290.0 6 11629.0 7 14968.0 8 13198.5 9 11429.0 10 16322.5 11 21216.0 12 21216.0 13 44932.5 14 68649.0 15 103093.0 16 137537.0 17 121606.5 18 105676.0 19 105676.0 20 124110.0 21 142544.0 22 109801.5 23 77059.0 24 88708.5 25 100358.0 26 100358.0 27 118106.0 28 135854.0 29 161614.0 30 187374.0 31 212545.5 32 237717.0 33 237717.0 34 262849.5 35 287982.0 36 321940.5 37 355899.0 38 390799.5 39 425700.0 40 425700.0 41 470976.0 42 516252.0 43 559286.0 44 602320.0 45 641535.5 46 680751.0 47 680751.0 48 736804.5 49 792858.0 50 821141.5 51 849425.0 52 851220.5 53 853016.0 54 853016.0 55 809578.0 56 766140.0 57 705888.0 58 645636.0 59 591914.0 60 538192.0 61 538192.0 62 479848.5 63 421505.0 64 366239.0 65 310973.0 66 268213.0 67 225453.0 68 225453.0 69 193953.5 70 162454.0 71 142166.0 72 121878.0 73 100645.0 74 79412.0 75 79412.0 76 67028.5 77 54645.0 78 44548.5 79 34452.0 80 27097.5 81 19743.0 82 19743.0 83 15705.0 84 11667.0 85 9652.0 86 7637.0 87 5859.5 88 4082.0 89 4082.0 90 2868.0 91 1654.0 92 1138.0 93 622.0 94 436.0 95 250.0 96 250.0 97 154.0 98 58.0 99 40.5 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.0023437E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.548263312623824 #Duplication Level Percentage of deduplicated Percentage of total 1 78.52221522605431 36.550727502328954 2 11.027629903554505 10.26634040929639 3 3.740576664423699 5.223520425499514 4 1.8041316460841377 3.3591677965024753 5 1.0710182816855378 2.4927020494266166 6 0.6993863463158251 1.9533131883337762 7 0.4769762759468972 1.5541692100655622 8 0.3661065446864369 1.3633299074031315 9 0.2795309198666256 1.1710510975774473 >10 1.758948925322235 15.47523724655708 >50 0.15408014294543937 4.9244048082404035 >100 0.08912220913542647 7.910019846079135 >500 0.006582334709544072 2.0822943752887886 >1k 0.0034810199382430142 2.91159682930414 >5k 1.0677966567370943E-4 0.34477732092663205 >10k+ 1.0677966567370943E-4 2.4173479871698764 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 75892 0.7571454781428766 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 75726 0.7554893595879337 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 50361 0.5024324490691168 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30606 0.30534436441312496 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10589 0.10564240589330785 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.995323560172025E-5 0.0 0.0 2.992985340258037E-5 2.992985340258037E-5 2 5.187841256447265E-4 0.0 0.0 2.992985340258037E-5 2.992985340258037E-5 3 7.18316481661929E-4 0.0 0.0 2.992985340258037E-5 2.992985340258037E-5 4 7.781761884670897E-4 0.0 0.0 6.983632460602087E-5 2.992985340258037E-5 5 0.0028233828376434153 0.0 0.0 1.59625884813762E-4 2.992985340258037E-5 6 0.00399064712034405 0.0 0.0 1.7957912041548224E-4 4.9883089004300624E-5 7 0.004609197423997378 0.0 0.0 1.8955573821634235E-4 4.9883089004300624E-5 8 0.005866251266905753 0.0 0.0 2.5939206282236325E-4 5.985970680516074E-5 9 0.006305222450143599 0.0 0.0 2.5939206282236325E-4 6.983632460602087E-5 10 0.009298207790401636 0.0 0.0 3.591582408309645E-4 6.983632460602087E-5 11 0.010265939717085068 0.0 0.0 4.190179476361252E-4 6.983632460602087E-5 12 0.010794700460530654 0.0 0.0 4.888542722421461E-4 6.983632460602087E-5 13 0.011582853266798605 0.0 0.0 5.088075078438664E-4 6.983632460602087E-5 14 0.012989556376719882 0.0 0.0 5.786438324498872E-4 1.0974279580946136E-4 15 0.013937335067801593 0.0 0.0 6.784100104584884E-4 1.2969603141118163E-4 16 0.014845207287679865 0.0 0.0 7.18316481661929E-4 1.696025026146221E-4 17 0.015194388910709969 0.0 0.0 7.582229528653694E-4 1.696025026146221E-4 18 0.015423851120129752 0.0 0.0 8.280592774713903E-4 1.8955573821634235E-4 19 0.01604240142378308 0.0 0.0 8.579891308739707E-4 1.995323560172025E-4 20 0.020302417224750353 0.0 0.0 0.0013368667853152565 1.995323560172025E-4 21 0.02900202794710038 0.0 0.0 0.0021549494449857867 2.095089738180626E-4 22 0.02960062501515199 0.0 0.0 0.0024841778324141708 2.095089738180626E-4 23 0.030298988261212197 0.0 0.0 0.0027934529842408348 2.3943882722064297E-4 24 0.031595948575324016 0.0 0.0 0.0035117694659027635 2.494154450215031E-4 25 0.03225440535018078 0.0 0.0 0.004100389916153511 2.494154450215031E-4 26 0.03723273763280998 0.0 0.0 0.005457209937070488 2.494154450215031E-4 27 0.03822042279509513 0.0 0.0 0.008300546010315624 2.494154450215031E-4 28 0.04008605032385598 0.0 0.0 0.014795324198675564 2.5939206282236325E-4 29 0.04031551253327576 0.0 0.0 0.028612939852866837 2.5939206282236325E-4 30 0.04092408621912823 0.0 0.0 0.04761839676350537 2.5939206282236325E-4 31 0.04201153755942198 0.0 0.0 0.10164178215516294 2.5939206282236325E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 43435 0.0 13.229192 1 TTAATCC 3325 0.0 11.0165415 4 TAATCCC 3210 0.0 11.007789 5 TCTATAC 835 0.0 10.856287 3 GTATAGA 875 0.0 10.782857 1 TCGTTAC 1805 0.0 10.556787 23 TTTAATC 4040 0.0 10.074258 3 GTATCAA 57140 0.0 10.059416 2 TCTACAC 1820 0.0 9.85989 3 CCTTTAA 4300 0.0 9.766279 1 TCAATAC 1120 0.0 9.745536 3 TAAGACT 1235 0.0 9.736842 4 TAGGGTG 1220 0.0 9.704918 5 AACGCAG 62205 0.0 9.677518 5 CGTTATG 550 0.0 9.418181 24 CGTTACG 1535 0.0 9.400651 24 CTCGTTA 2130 0.0 9.293427 22 CCGATTT 1420 0.0 9.25 21 GTACTAC 760 0.0 9.25 1 GGAGAGT 3150 0.0 9.220634 6 >>END_MODULE