##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727589.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4135958 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.080904835107127 31.0 31.0 33.0 30.0 34.0 2 31.32081539512732 31.0 31.0 34.0 30.0 34.0 3 31.321946209318373 31.0 31.0 34.0 28.0 34.0 4 35.131528898504286 37.0 35.0 37.0 32.0 37.0 5 34.938213830991515 35.0 35.0 37.0 32.0 37.0 6 35.09124705811809 36.0 35.0 37.0 32.0 37.0 7 35.0485848744112 36.0 35.0 37.0 32.0 37.0 8 35.043292025692715 37.0 35.0 37.0 32.0 37.0 9 36.624867805717564 38.0 35.0 39.0 32.0 39.0 10 36.34570660533787 38.0 35.0 39.0 32.0 39.0 11 36.50638763739864 38.0 35.0 39.0 32.0 39.0 12 36.29400757938064 38.0 35.0 39.0 32.0 39.0 13 36.38419684145729 38.0 35.0 39.0 32.0 39.0 14 37.30827319813209 39.0 36.0 40.0 32.0 41.0 15 37.31000895076787 39.0 36.0 40.0 32.0 41.0 16 37.1952307059211 39.0 36.0 40.0 32.0 41.0 17 37.157689222182626 39.0 36.0 40.0 31.0 41.0 18 37.07687215392419 39.0 36.0 40.0 31.0 41.0 19 37.07184792495475 39.0 36.0 40.0 31.0 41.0 20 36.97637693612943 39.0 36.0 40.0 31.0 41.0 21 36.86851994145008 39.0 36.0 40.0 31.0 41.0 22 36.76561826788377 39.0 36.0 40.0 30.0 41.0 23 36.64290643183514 38.0 35.0 40.0 30.0 41.0 24 36.50742584910195 38.0 35.0 40.0 30.0 41.0 25 36.77196697838808 39.0 36.0 40.0 30.0 41.0 26 36.66973576617558 39.0 36.0 40.0 30.0 41.0 27 36.59615789135189 39.0 35.0 40.0 30.0 41.0 28 36.50289703135283 38.0 35.0 40.0 30.0 41.0 29 36.404277557944255 38.0 35.0 40.0 30.0 41.0 30 36.287724633567365 38.0 35.0 40.0 30.0 41.0 31 36.146019616253355 38.0 35.0 40.0 30.0 41.0 32 36.01752749907035 38.0 35.0 40.0 29.0 41.0 33 35.90961441097806 38.0 35.0 40.0 29.0 41.0 34 35.796748177810315 38.0 34.0 40.0 28.0 41.0 35 35.66724057642752 38.0 34.0 40.0 27.0 41.0 36 35.5464332568174 38.0 34.0 40.0 27.0 41.0 37 35.441379723875336 38.0 34.0 40.0 27.0 41.0 38 35.3223949566219 38.0 34.0 40.0 26.0 41.0 39 35.13142203088136 38.0 34.0 40.0 26.0 41.0 40 34.980348930042325 38.0 33.0 40.0 25.0 41.0 41 34.84705067121088 38.0 33.0 40.0 25.0 41.0 42 34.66533920315438 38.0 33.0 40.0 24.0 41.0 43 34.46337462807891 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 6.0 14 19.0 15 49.0 16 109.0 17 241.0 18 547.0 19 1110.0 20 2294.0 21 4228.0 22 7471.0 23 12240.0 24 18711.0 25 28011.0 26 39181.0 27 53934.0 28 72196.0 29 93552.0 30 118607.0 31 148766.0 32 181765.0 33 224824.0 34 281569.0 35 357817.0 36 482051.0 37 677749.0 38 886284.0 39 442624.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.4526491806735 23.332127647331042 14.625898038616448 22.589325133379017 2 23.3792509498404 24.89638434432845 29.532456567498993 22.19190813833216 3 24.4752485397579 24.586758376173066 28.648985313680654 22.289007770388384 4 19.92839385699758 18.86063639911237 30.658362584919868 30.552607158970186 5 15.631130683628799 37.62497104661121 32.43398506464524 14.309913205114752 6 34.86718192012589 35.6035530341459 13.825333816252487 15.703931229475735 7 29.089246070680602 31.122946606324337 20.42963202237547 19.35817530061959 8 28.158240485033936 34.65470394041719 18.53099088530396 18.65606468924491 9 27.279411444700358 13.753959783924305 18.757250436295532 40.209378335079805 10 17.26439194982154 28.4782872553348 32.387224435064375 21.870096359779282 11 36.360499792309305 22.031340743788984 20.200809582689185 21.407349881212525 12 21.542699418127555 26.35251615224333 29.16436772326992 22.940416706359205 13 32.00494299023346 19.978152582787352 23.83467143525152 24.182232991727673 14 22.17070386111271 21.48866115178152 26.041028463054992 30.299606524050777 15 25.89634614277998 28.210803881470746 22.426001424579265 23.46684855117001 16 24.03136105347298 26.00616350552883 25.51391962877766 24.44855581222053 17 24.041467539080426 26.427541092051708 25.971105122440797 23.559886246427066 18 24.220869747710204 24.979243019392364 26.63126656508601 24.168620667811425 19 25.202020910270367 24.9520425497551 27.49870767546479 22.347228864509745 20 24.295241876247292 24.803685143804653 27.576561464115446 23.324511515832608 21 24.217243018425236 24.94848835505583 27.705286175536596 23.128982450982335 22 24.19536175173926 24.980113434420755 27.105255904436167 23.71926890940382 23 23.932472234969502 25.034248413547722 27.32264205777718 23.710637293705595 24 23.621734069833398 25.292229756685153 27.277041981567514 23.80899419191394 25 24.159336240841906 24.8827720204122 27.297956120444162 23.659935618301734 26 23.7295446423779 25.348153922259364 27.48393479817735 23.438366637185386 27 24.260715413454392 25.56616870867644 26.98569472900837 23.187421148860796 28 23.59673381596235 26.024369686539373 27.154700313687908 23.224196183810378 29 23.774516085511507 26.116222650230007 27.221818983655055 22.88744228060343 30 24.162455228026978 25.654104804739315 26.81765627213816 23.365783695095548 31 24.03027303468749 25.37180019719736 27.504776402468305 23.093150365646846 32 23.700047244193488 25.772239466648355 26.99420545373043 23.53350783542773 33 23.658170610049716 25.600598458688413 27.041062796092223 23.70016813516965 34 23.96733719249567 25.771320695229498 27.153588116707184 23.107753995567652 35 23.835372602913278 26.017333831726532 26.97162301938269 23.175670545977496 36 23.869028650677787 25.952439555720826 26.965747717941042 23.21278407566034 37 23.746155062503053 26.17328319098018 27.057286365093645 23.02327538142312 38 23.97183433680903 25.895040520237387 26.998146499553428 23.13497864340015 39 23.365807873290784 26.72921243397539 26.884726585714848 23.020253107018977 40 24.117749745040932 26.187113118653528 26.902352490039792 22.79278464626575 41 23.642769099686216 26.25386911569218 26.68590928631287 23.417452498308737 42 23.726909219097486 26.34124911326469 26.394513677363264 23.537327990274562 43 23.757784774410183 26.126885234327812 26.527227790997877 23.58810220026412 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 870.0 1 903.5 2 937.0 3 1292.5 4 1648.0 5 1648.0 6 3083.0 7 4518.0 8 4146.5 9 3775.0 10 5542.0 11 7309.0 12 7309.0 13 17590.0 14 27871.0 15 41658.5 16 55446.0 17 45814.5 18 36183.0 19 36183.0 20 47839.0 21 59495.0 22 47094.5 23 34694.0 24 39705.0 25 44716.0 26 44716.0 27 54452.5 28 64189.0 29 74717.0 30 85245.0 31 97806.5 32 110368.0 33 110368.0 34 122613.0 35 134858.0 36 149866.5 37 164875.0 38 180647.0 39 196419.0 40 196419.0 41 212435.0 42 228451.0 43 244672.0 44 260893.0 45 275132.0 46 289371.0 47 289371.0 48 307651.0 49 325931.0 50 335157.5 51 344384.0 52 341538.0 53 338692.0 54 338692.0 55 320910.5 56 303129.0 57 279996.0 58 256863.0 59 236002.5 60 215142.0 61 215142.0 62 189498.0 63 163854.0 64 141600.5 65 119347.0 66 101463.5 67 83580.0 68 83580.0 69 71487.0 70 59394.0 71 51443.0 72 43492.0 73 35464.5 74 27437.0 75 27437.0 76 22827.0 77 18217.0 78 14576.0 79 10935.0 80 8443.5 81 5952.0 82 5952.0 83 4713.0 84 3474.0 85 2849.0 86 2224.0 87 1623.0 88 1022.0 89 1022.0 90 749.5 91 477.0 92 336.0 93 195.0 94 133.5 95 72.0 96 72.0 97 42.5 98 13.0 99 7.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4135958.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.01474420514163 #Duplication Level Percentage of deduplicated Percentage of total 1 82.30330403645162 46.10198522839838 2 9.3066907582625 10.42623804440859 3 3.0779721575761596 5.172354692315293 4 1.48925162874081 3.336801961640281 5 0.8831002018208285 2.473331595625133 6 0.5625505692434608 1.890667574317756 7 0.412411522383123 1.6170788153480573 8 0.28538894360882233 1.2788790940179018 9 0.2176068527586675 1.097027297510641 >10 1.2993565410132195 13.518910056628316 >50 0.10511654479204338 4.086131833830117 >100 0.05410851601242092 5.256566527754386 >500 0.0021088307234819388 0.8061952478330995 >1k 8.607471774992103E-4 0.8065809221038994 >5k 0.0 0.0 >10k+ 1.7214943549983606E-4 2.1312511082682137 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31670 0.7657234430330289 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30569 0.7391032500813596 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14102 0.340960909177511 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12066 0.29173410368287106 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4855 0.11738513785681576 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.6596014756436116E-4 0.0 0.0 2.417819523312374E-5 0.0 3 3.626729284968561E-4 0.0 0.0 4.835639046624748E-5 0.0 4 4.110293189631036E-4 0.0 0.0 7.253458569937123E-5 2.417819523312374E-5 5 0.0017891864472511568 0.0 0.0 3.384947332637324E-4 2.417819523312374E-5 6 0.002538710499477993 0.0 0.0 3.8685112372997983E-4 1.208909761656187E-4 7 0.0028530270375086014 0.0 0.0 5.077420998955986E-4 1.208909761656187E-4 8 0.0037717984563673036 0.0 0.0 6.52811271294341E-4 1.208909761656187E-4 9 0.003989402213465418 0.0 0.0 7.737022474599597E-4 1.208909761656187E-4 10 0.005657697684550956 0.0 0.0 0.0014506917139874244 1.208909761656187E-4 11 0.0060445488082809355 0.0 0.0 0.0015957608853861668 1.208909761656187E-4 12 0.006286330760612173 0.0 0.0 0.0016924736663186618 1.692473666318662E-4 13 0.006697360079575276 0.0 0.0 0.0018133646424842804 2.417819523312374E-4 14 0.00730181496040337 0.0 0.0 0.002345284937613003 2.901383427974849E-4 15 0.00795462623169771 0.0 0.0 0.002538710499477993 3.384947332637324E-4 16 0.008438190136360185 0.0 0.0 0.0026596014756436115 5.077420998955986E-4 17 0.008607437502992052 0.0 0.0 0.0027563142565761064 5.319202951287223E-4 18 0.008704150283924546 0.0 0.0 0.002828848842275478 6.286330760612173E-4 19 0.009066823212421403 0.0 0.0 0.0030222744041404678 6.286330760612173E-4 20 0.011702246492831891 0.0 0.0 0.0039410458229991695 6.286330760612173E-4 21 0.01719069681075098 0.0 0.0 0.006068727003514059 6.52811271294341E-4 22 0.017480835153548466 0.0 0.0 0.006407221736777791 6.52811271294341E-4 23 0.01777097349634595 0.0 0.0 0.006576469103409657 6.52811271294341E-4 24 0.018713923110437774 0.0 0.0 0.007060033008072133 6.52811271294341E-4 25 0.0192458434055665 0.0 0.0 0.007374349546102741 6.769894665274648E-4 26 0.021857088490743862 0.0 0.0 0.009066823212421403 7.011676617605884E-4 27 0.022316474200173214 0.0 0.0 0.00996141643604698 7.253458569937122E-4 28 0.023477027571363152 0.0 0.0 0.012355057764126232 7.253458569937122E-4 29 0.023622096742761896 0.0 0.0 0.0162961035871254 7.737022474599597E-4 30 0.023936413280792504 0.0 0.0 0.021832910295510738 7.737022474599597E-4 31 0.024419977185454977 0.0 0.0 0.03994237852512042 7.737022474599597E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACGT 85 2.7258875E-5 17.411764 5 GGTATCA 13920 0.0 15.363506 1 TAGCGTA 110 2.4587804E-4 13.454545 19 ATACGCG 125 4.8503312E-5 13.320001 4 TAACACG 115 3.5806693E-4 12.869565 4 TGTATAC 450 0.0 12.333333 3 CGTTCGG 120 5.126439E-4 12.333333 10 CGCGTAT 120 5.126439E-4 12.333333 7 TACACTC 420 0.0 12.333333 5 ATACCGA 150 1.9463088E-5 12.333333 6 GTATCAA 17460 0.0 12.237972 2 TACACGG 350 0.0 12.157143 5 TATACAG 900 0.0 12.127778 5 TTGCGAT 110 0.0037478681 11.772727 27 CGCGAAC 210 3.8484723E-7 11.45238 12 CTACACT 760 0.0 11.440789 4 CTACACG 345 1.8189894E-12 11.26087 4 ATACACT 875 0.0 11.205714 4 GGGTAAG 2745 0.0 11.120218 1 TTATACG 150 2.657981E-4 11.1 2 >>END_MODULE