##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727588.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9589938 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27087098998972 33.0 31.0 34.0 31.0 34.0 2 32.49024613089261 34.0 31.0 34.0 31.0 34.0 3 32.55286082141511 34.0 31.0 34.0 31.0 34.0 4 36.08220334688295 37.0 35.0 37.0 35.0 37.0 5 36.003598771962864 37.0 35.0 37.0 35.0 37.0 6 36.02177094367033 37.0 35.0 37.0 35.0 37.0 7 35.95623256375589 37.0 35.0 37.0 35.0 37.0 8 35.96006668656252 37.0 35.0 37.0 35.0 37.0 9 37.63046872670084 39.0 37.0 39.0 35.0 39.0 10 37.58180782816323 39.0 37.0 39.0 35.0 39.0 11 37.62060484645469 39.0 37.0 39.0 35.0 39.0 12 37.50874228801062 39.0 37.0 39.0 35.0 39.0 13 37.50110469952986 39.0 37.0 39.0 35.0 39.0 14 38.739091222487566 40.0 38.0 41.0 35.0 41.0 15 38.72632909618394 40.0 38.0 41.0 34.0 41.0 16 38.646790521482 40.0 38.0 41.0 34.0 41.0 17 38.624074941881794 40.0 38.0 41.0 34.0 41.0 18 38.56032604173249 40.0 38.0 41.0 34.0 41.0 19 38.551331718724356 40.0 38.0 41.0 34.0 41.0 20 38.451970492405685 40.0 38.0 41.0 34.0 41.0 21 38.36237106016744 40.0 38.0 41.0 34.0 41.0 22 38.26170992972009 40.0 38.0 41.0 33.0 41.0 23 38.43418560161703 40.0 38.0 41.0 34.0 41.0 24 38.430174835332615 40.0 38.0 41.0 34.0 41.0 25 38.42121075235314 40.0 38.0 41.0 34.0 41.0 26 38.282043950649104 40.0 38.0 41.0 34.0 41.0 27 38.298817990272724 40.0 38.0 41.0 34.0 41.0 28 38.19087328823189 40.0 38.0 41.0 33.0 41.0 29 38.15294123903617 40.0 38.0 41.0 33.0 41.0 30 38.06886374030781 40.0 37.0 41.0 33.0 41.0 31 37.93913203609867 40.0 37.0 41.0 33.0 41.0 32 37.80905246728394 40.0 37.0 41.0 33.0 41.0 33 37.697094079231796 40.0 37.0 41.0 33.0 41.0 34 37.605713926409116 40.0 37.0 41.0 33.0 41.0 35 37.490719126651285 40.0 36.0 41.0 32.0 41.0 36 37.38251217056878 40.0 36.0 41.0 32.0 41.0 37 37.27713463840955 40.0 36.0 41.0 31.0 41.0 38 37.137834676303434 40.0 36.0 41.0 31.0 41.0 39 37.00440513796857 40.0 35.0 41.0 31.0 41.0 40 36.87406957166981 40.0 35.0 41.0 30.0 41.0 41 36.72369226996045 40.0 35.0 41.0 30.0 41.0 42 36.57188325930783 39.0 35.0 41.0 30.0 41.0 43 36.38675432521045 39.0 35.0 41.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 6.0 12 18.0 13 31.0 14 34.0 15 72.0 16 151.0 17 281.0 18 483.0 19 1033.0 20 1903.0 21 3673.0 22 6808.0 23 11188.0 24 18296.0 25 28364.0 26 41318.0 27 59114.0 28 82395.0 29 110555.0 30 145100.0 31 187837.0 32 238891.0 33 308545.0 34 407398.0 35 533922.0 36 739794.0 37 1181526.0 38 1873882.0 39 3607315.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96948530845559 19.03128049420132 12.79135485547456 25.207879341868527 2 19.344827881056165 22.35078057856057 33.622636559277026 24.681754981106238 3 20.071214224742643 23.211547353069438 30.785725622000893 25.93151280018703 4 15.005529754206961 16.282805999371426 33.50959099005645 35.20207325636516 5 14.757196553304098 36.73045644299264 33.414095065056735 15.098251938646529 6 34.35402814908709 34.89730590541878 14.47228334531464 16.276382600179478 7 28.80850741683627 31.178981553373962 20.63890298352294 19.373608046266828 8 27.67792659347745 34.22375619112449 18.945450950777783 19.152866264620272 9 26.82048622212156 14.269351897791205 19.56058527177131 39.34957660831592 10 17.296785443242698 27.838021476259804 32.294692624707274 22.570500455790224 11 34.78142403006151 22.535693140039072 20.998008537698574 21.684874292200846 12 21.530785704766807 26.371526072431333 29.49648892412026 22.6011992986816 13 31.320004362906207 20.330506829136954 24.283201830919033 24.066286977037805 14 22.00687845948535 21.705093401020946 26.58244505856034 29.70558308093337 15 25.139849704972022 28.192361619021938 23.347783895995992 23.32000478001005 16 23.36075582553297 26.143484973521204 26.010898089226437 24.48486111171939 17 23.246803055452496 26.567033071538106 26.543988084177393 23.642175788832002 18 23.54101767915496 25.0938744338076 27.42108447416448 23.94402341287295 19 24.46629999067773 25.034603977627384 28.34151795350502 22.157578078189868 20 23.786420725556308 24.860932364734786 28.34513632934853 23.007510580360375 21 23.342830787852854 25.39703593495599 28.518380410801402 22.741752866389753 22 23.561925009317058 25.043300592767125 27.853277049340676 23.54149734857514 23 23.0984600734645 25.246597006153742 28.08145370699998 23.573489213381777 24 22.931065873418575 25.44565981552748 28.238117910668453 23.385156400385487 25 23.43483346816215 25.00429095579137 28.03816875562699 23.522706820419486 26 22.909042790474764 25.755150867503 28.278858528595286 23.056947813426948 27 23.450422724317928 25.71445195996053 28.072611105514966 22.76251421020657 28 22.94412122372428 25.976403601358005 27.898053146954656 23.18142202796306 29 22.9104817987353 26.181243298966063 28.12278869790399 22.785486204394648 30 23.25833597672894 25.800583903670706 27.86910614020654 23.07197397939382 31 23.164425046335026 25.489059470457477 28.23820133143718 23.108314151770323 32 22.78260818787358 26.07265031327627 27.837249834149087 23.307491664701065 33 22.66260741206043 25.76629796772409 28.072256567247877 23.4988380529676 34 23.255155559921242 25.91817590478687 28.049931084017437 22.77673745127445 35 23.013131054653325 26.29107716859066 27.804924286267546 22.890867490488468 36 22.976060950550462 26.171420503448513 27.869596237222805 22.98292230877822 37 23.01786518327856 26.13559128328046 27.797176582372064 23.049366951068922 38 22.95729127758699 26.265341861438518 27.91010744803564 22.867259412938854 39 22.702096718456367 26.73683604628101 27.796738623336253 22.764328611926377 40 23.26645907408369 26.30760490839461 27.714277193450055 22.711658824071645 41 22.873870508860435 26.48666758846616 27.60068938923276 23.03877251344065 42 22.910951040559386 26.450473402434927 27.313085861451867 23.32548969555382 43 22.968813771267342 26.208010938131192 27.34518200221941 23.477993288382052 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4567.0 1 4319.5 2 4072.0 3 6304.0 4 8536.0 5 8536.0 6 10997.0 7 13458.0 8 12190.0 9 10922.0 10 16522.0 11 22122.0 12 22122.0 13 49020.5 14 75919.0 15 111143.0 16 146367.0 17 128828.5 18 111290.0 19 111290.0 20 132476.0 21 153662.0 22 120579.0 23 87496.0 24 101054.0 25 114612.0 26 114612.0 27 136346.5 28 158081.0 29 183502.5 30 208924.0 31 237374.0 32 265824.0 33 265824.0 34 296247.5 35 326671.0 36 362021.5 37 397372.0 38 431193.5 39 465015.0 40 465015.0 41 502013.5 42 539012.0 43 575427.0 44 611842.0 45 639441.5 46 667041.0 47 667041.0 48 705942.5 49 744844.0 50 761692.0 51 778540.0 52 766466.5 53 754393.0 54 754393.0 55 714363.0 56 674333.0 57 624226.0 58 574119.0 59 523519.0 60 472919.0 61 472919.0 62 419394.0 63 365869.0 64 314701.0 65 263533.0 66 225421.0 67 187309.0 68 187309.0 69 159802.0 70 132295.0 71 113563.5 72 94832.0 73 76956.5 74 59081.0 75 59081.0 76 48860.5 77 38640.0 78 31448.0 79 24256.0 80 19065.5 81 13875.0 82 13875.0 83 11009.0 84 8143.0 85 6528.5 86 4914.0 87 3887.5 88 2861.0 89 2861.0 90 2146.0 91 1431.0 92 970.5 93 510.0 94 405.0 95 300.0 96 300.0 97 189.5 98 79.0 99 68.0 100 57.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9589938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.181215088283835 #Duplication Level Percentage of deduplicated Percentage of total 1 76.00785496879196 34.34127243744073 2 12.231324012898703 11.052521620825345 3 4.287286203898547 5.811144003701163 4 2.0539903695094566 3.7120712269628138 5 1.200532404572644 2.7120756395725603 6 0.7650929678645606 2.0740697966173287 7 0.559570189328015 1.7697442756714528 8 0.41414644893321434 1.496931182984041 9 0.3135339383545893 1.274925987564788 >10 1.892157590413714 16.056771087807554 >50 0.16970100715883535 5.312388507346784 >100 0.09738975368378538 8.132547611478126 >500 0.0052250977638415705 1.571356892950113 >1k 0.0020102008917890954 1.6461774172176074 >5k 6.931722626132524E-5 0.24950297521988174 >10k+ 1.1552871043554207E-4 2.786499336639784 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 83518 0.8708919703130511 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 82608 0.8614028578704055 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 53868 0.561713746220257 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34920 0.3641316554914119 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12006 0.12519371866637719 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9691 0.10105383371613039 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.128278827245807E-5 0.0 0.0 2.0855192181638712E-5 1.0427596090819356E-5 2 3.4411067099703876E-4 0.0 0.0 4.1710384363277424E-5 1.0427596090819356E-5 3 5.213798045409678E-4 0.0 0.0 5.213798045409678E-5 1.0427596090819356E-5 4 5.630901889042453E-4 0.0 0.0 9.384836481737421E-5 2.0855192181638712E-5 5 0.00227321594779862 0.0 0.0 1.251311530898323E-4 2.0855192181638712E-5 6 0.0033159755568805556 0.0 0.0 1.981243257255678E-4 3.128278827245807E-5 7 0.0037643621887857876 0.0 0.0 2.189795179072065E-4 5.213798045409678E-5 8 0.004984390931411653 0.0 0.0 2.815450944521226E-4 7.29931726357355E-5 9 0.005411922371135246 0.0 0.0 3.128278827245807E-4 8.342076872655485E-5 10 0.007810269472023698 0.0 0.0 4.275314397235936E-4 8.342076872655485E-5 11 0.00841507004529122 0.0 0.0 4.796694201776904E-4 8.342076872655485E-5 12 0.008884311869378093 0.0 0.0 5.005246123593292E-4 9.384836481737421E-5 13 0.009697664364462002 0.0 0.0 5.83945381085884E-4 9.384836481737421E-5 14 0.010896837914906228 0.0 0.0 6.569385537216195E-4 1.668415374531097E-4 15 0.011897887139624886 1.0427596090819356E-5 0.0 6.986489380848969E-4 1.7726913354392906E-4 16 0.012554825693346506 1.0427596090819356E-5 0.0 7.716421107206324E-4 1.8769672963474843E-4 17 0.012763377615162892 1.0427596090819356E-5 0.0 7.820697068114517E-4 1.981243257255678E-4 18 0.012982357133070098 1.0427596090819356E-5 0.0 7.924973029022712E-4 1.981243257255678E-4 19 0.013482881745429429 1.0427596090819356E-5 0.0 9.07200859901284E-4 2.0855192181638713E-4 20 0.016903133263218177 1.0427596090819356E-5 0.0 0.0011261803778084905 2.0855192181638713E-4 21 0.02447356802515303 1.0427596090819356E-5 0.0 0.001699698162803555 2.189795179072065E-4 22 0.02495323744533072 2.0855192181638712E-5 0.0 0.002085519218163871 2.189795179072065E-4 23 0.02543290686550841 2.0855192181638712E-5 0.0 0.002314926332161897 2.91972690542942E-4 24 0.026371390513682154 2.0855192181638712E-5 0.0 0.0027007473875222134 2.91972690542942E-4 25 0.027007473875222135 2.0855192181638712E-5 0.0 0.002961437289792697 3.0240028663376135E-4 26 0.030427725393010883 2.0855192181638712E-5 0.0 0.0036392310356959555 3.0240028663376135E-4 27 0.03132449865682135 2.0855192181638712E-5 0.0 0.005391067178953607 3.0240028663376135E-4 28 0.03269051374471868 2.0855192181638712E-5 0.0 0.010458878879091815 3.128278827245807E-4 29 0.03291992085871671 2.0855192181638712E-5 0.0 0.02022953641618955 3.128278827245807E-4 30 0.0333995902788944 3.128278827245807E-5 0.0 0.03300334162744326 3.128278827245807E-4 31 0.034254653158341586 3.128278827245807E-5 0.0 0.0616792308771965 3.128278827245807E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 33470 0.0 15.482074 1 TCGTTAC 1385 0.0 11.620938 23 TTAATCC 3285 0.0 11.544902 4 GTATCAA 45150 0.0 11.456479 2 TAATCCC 3125 0.0 11.129601 5 CCTTTAA 4200 0.0 10.835715 1 TAATACT 2100 0.0 10.74762 4 ACGAGAC 1210 0.0 10.70248 22 GTATACG 350 3.45608E-11 10.571429 1 CGCGTAA 140 0.0018640539 10.571428 10 AACGCAG 51850 0.0 10.514851 5 CGTTACG 1195 0.0 10.372385 24 TATACAC 1805 0.0 10.351801 3 TTTAATC 4000 0.0 10.175 3 TCTATAC 855 0.0 10.169591 3 TAGATCG 515 0.0 10.058253 5 GGGTAAG 4825 0.0 10.045596 1 GTTACGG 2095 0.0 9.890215 25 TACACAG 3255 0.0 9.8894005 5 TATACTG 1385 0.0 9.884476 5 >>END_MODULE