##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727585.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9145813 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.983413940346253 31.0 31.0 34.0 30.0 34.0 2 32.169792450381394 33.0 31.0 34.0 30.0 34.0 3 32.24997712067806 34.0 31.0 34.0 30.0 34.0 4 35.887417663142685 37.0 35.0 37.0 35.0 37.0 5 35.77825470518586 37.0 35.0 37.0 35.0 37.0 6 35.816885278542216 37.0 35.0 37.0 35.0 37.0 7 35.73318457309372 37.0 35.0 37.0 33.0 37.0 8 35.71219999796628 37.0 35.0 37.0 33.0 37.0 9 37.38659701439336 39.0 37.0 39.0 34.0 39.0 10 37.2651566350635 39.0 37.0 39.0 34.0 39.0 11 37.3300584650047 39.0 37.0 39.0 34.0 39.0 12 37.18097450713239 39.0 37.0 39.0 33.0 39.0 13 37.217898179199594 39.0 37.0 39.0 33.0 39.0 14 38.40742654589592 40.0 38.0 41.0 33.0 41.0 15 38.40629498984946 40.0 38.0 41.0 33.0 41.0 16 38.33919696368163 40.0 38.0 41.0 33.0 41.0 17 38.292816177194965 40.0 38.0 41.0 33.0 41.0 18 38.21836888639643 40.0 38.0 41.0 33.0 41.0 19 38.215428961864845 40.0 38.0 41.0 33.0 41.0 20 38.139718688759544 40.0 37.0 41.0 33.0 41.0 21 38.04974265273082 40.0 37.0 41.0 33.0 41.0 22 37.969998621227006 40.0 37.0 41.0 33.0 41.0 23 37.868389611727245 40.0 37.0 41.0 32.0 41.0 24 37.77016619517587 40.0 37.0 41.0 32.0 41.0 25 38.00365369377222 40.0 37.0 41.0 33.0 41.0 26 37.96268456396386 40.0 37.0 41.0 33.0 41.0 27 37.92301799741587 40.0 37.0 41.0 33.0 41.0 28 37.867022756752185 40.0 37.0 41.0 33.0 41.0 29 37.80890698290026 40.0 37.0 41.0 32.0 41.0 30 37.72125179030011 40.0 37.0 41.0 32.0 41.0 31 37.62659393976238 40.0 37.0 41.0 32.0 41.0 32 37.53160883564971 40.0 37.0 41.0 32.0 41.0 33 37.45229691444599 40.0 36.0 41.0 31.0 41.0 34 37.36886026425425 40.0 36.0 41.0 31.0 41.0 35 37.26264018299959 40.0 36.0 41.0 31.0 41.0 36 37.17232431933607 40.0 36.0 41.0 31.0 41.0 37 37.10637818638977 40.0 36.0 41.0 31.0 41.0 38 37.012232373436895 39.0 36.0 41.0 31.0 41.0 39 36.88870929243797 39.0 35.0 41.0 30.0 41.0 40 36.781816772330686 39.0 35.0 41.0 30.0 41.0 41 36.67697098114733 39.0 35.0 41.0 30.0 41.0 42 36.552547816142756 39.0 35.0 41.0 30.0 41.0 43 36.41610067907577 39.0 35.0 41.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 2.0 13 2.0 14 7.0 15 32.0 16 69.0 17 151.0 18 371.0 19 842.0 20 1743.0 21 3529.0 22 6607.0 23 11479.0 24 18897.0 25 29676.0 26 44243.0 27 64960.0 28 91494.0 29 125365.0 30 165964.0 31 215779.0 32 274419.0 33 348227.0 34 447388.0 35 578348.0 36 771010.0 37 1106200.0 38 1776794.0 39 3062214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.90630040216217 18.211491969057317 12.353401496400593 26.528806132379923 2 19.451031854685855 21.13130893885541 33.633346756597795 25.784312449860934 3 20.576585154321435 22.16414221458497 29.79548127651418 27.463791354579413 4 15.782588163567308 15.513940641471677 32.92408230957707 35.779388885383945 5 15.84460561351954 35.459865623755924 33.10326812936149 15.592260633363047 6 36.054279701542114 33.480916349372116 14.536947125422312 15.927856823663461 7 30.04778252081034 30.03843398066416 20.186209798953904 19.727573699571597 8 27.873804111236478 33.60771754244264 18.984665441989684 19.533812904331196 9 27.218312904495207 14.082214451574727 18.76342759249506 39.93604505143501 10 17.33769321546373 26.789515595825108 32.32574293832599 23.547048250385178 11 36.28042690135913 21.391056213373265 20.69211342939113 21.636403455876476 12 21.927006379859286 24.746952512586905 29.179330476142475 24.146710631411334 13 31.456459912311786 19.572464470900506 23.61164611609706 25.359429500690645 14 22.64040386568149 20.443343855816863 25.098293612607215 31.817958665894437 15 25.7201410087873 27.339854860360692 22.192395580360106 24.747608550491904 16 24.76415163966287 25.64077135624794 24.433355460034008 25.161721544055187 17 24.446705831400664 25.699421144954528 25.294809767048594 24.559063256596215 18 24.625705773778666 24.926728766485823 25.874156840950064 24.573408618785447 19 25.527003449556645 24.671792436604598 26.274996000902274 23.52620811293649 20 24.93866865635674 24.442714934145275 26.26378868669193 24.354827722806053 21 24.63439827601986 24.729644045860113 26.462994596543794 24.172963081576235 22 24.95381219799705 24.417140389815536 25.802954860327894 24.826092551859524 23 24.51762352893067 24.607861542762794 26.0334756461782 24.841039282128335 24 24.35599765706996 24.694633489663524 26.112670355276236 24.836698497990284 25 24.814688426277687 24.387137589627077 25.971797149143548 24.826376834951688 26 24.387476542544658 25.00013940805481 26.128994765145535 24.48338928425499 27 24.845259792650474 25.061457084241717 25.882805607330916 24.21047751577689 28 24.3360541047581 25.41544420381217 25.763198963285166 24.48530272814456 29 24.395841025833352 25.4496456465926 26.034328495454695 24.120184832119353 30 24.888536426450006 25.063414263991625 25.741943335163313 24.30610597439506 31 24.738631765158548 24.738478689647383 26.08802519797857 24.434864347215495 32 24.376455105740735 25.160814024953275 25.842492078068947 24.62023879123704 33 24.253579206135093 24.796494308379145 26.015664217057576 24.934262268428185 34 24.712882277387475 24.99966924755623 26.065096673198983 24.222351801857307 35 24.548829065278284 25.205293394911966 25.823959007252828 24.42191853255692 36 24.484471746798235 25.17104821627121 26.022727558501362 24.3217524784292 37 24.503376572427186 25.188192673521755 26.025264238400673 24.283166515650386 38 24.52068503915398 25.233809175849103 26.004784921799732 24.240720863197183 39 24.102963837113222 25.637447430862625 26.114430723654635 24.145158008369513 40 24.861420193043525 25.086583336003045 25.961213070942957 24.090783400010473 41 24.291957423577323 25.431987292983138 25.900289017499045 24.37576626594049 42 24.444070745815598 25.317169725643858 25.680111762617496 24.55864776592305 43 24.46106212755498 25.053005129232357 25.706714099665064 24.779218643547598 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1797.0 1 1782.0 2 1767.0 3 3279.0 4 4791.0 5 4791.0 6 6471.0 7 8151.0 8 7136.5 9 6122.0 10 8748.0 11 11374.0 12 11374.0 13 23655.5 14 35937.0 15 53505.0 16 71073.0 17 63746.5 18 56420.0 19 56420.0 20 67852.5 21 79285.0 22 66051.0 23 52817.0 24 63226.0 25 73635.0 26 73635.0 27 89983.5 28 106332.0 29 126576.0 30 146820.0 31 170982.0 32 195144.0 33 195144.0 34 223806.5 35 252469.0 36 289121.5 37 325774.0 38 364585.5 39 403397.0 40 403397.0 41 446838.5 42 490280.0 43 534889.5 44 579499.0 45 621154.5 46 662810.0 47 662810.0 48 708708.5 49 754607.0 50 777503.0 51 800399.0 52 798375.5 53 796352.0 54 796352.0 55 761337.5 56 726323.0 57 676375.5 58 626428.0 59 575585.5 60 524743.0 61 524743.0 62 467082.0 63 409421.0 64 353055.5 65 296690.0 66 254266.5 67 211843.0 68 211843.0 69 179628.0 70 147413.0 71 127755.5 72 108098.0 73 88970.0 74 69842.0 75 69842.0 76 58007.5 77 46173.0 78 37189.5 79 28206.0 80 21962.5 81 15719.0 82 15719.0 83 12107.5 84 8496.0 85 6874.5 86 5253.0 87 3879.0 88 2505.0 89 2505.0 90 1768.0 91 1031.0 92 699.5 93 368.0 94 260.5 95 153.0 96 153.0 97 94.5 98 36.0 99 28.0 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9145813.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.0999470228678 #Duplication Level Percentage of deduplicated Percentage of total 1 75.18974675651741 35.414330888948164 2 12.103506412284252 11.401490216190581 3 4.531702259433047 6.403288090281205 4 2.286813551572802 4.308351885210206 5 1.3375106313411367 3.1498339939345006 6 0.8462585656881542 2.391524016693609 7 0.6395409567476326 2.108564162723738 8 0.43926162099491106 1.6551359262431478 9 0.3551990800628612 1.5056872068178926 >10 2.038376198328044 17.969056801226333 >50 0.15705402935176344 5.043467012404836 >100 0.0717118768932843 5.884980578674407 >500 0.0022976143359140803 0.7143711379633964 >1k 9.04486664480706E-4 0.6890591396657242 >5k 2.319195685387992E-5 0.057784782782324705 >10k+ 9.276782741551969E-5 1.3030741602399014 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39269 0.4293658748544279 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 38574 0.4217667691215642 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26137 0.28578104538109406 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15312 0.1674208733548346 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.1867930166514446E-5 1.0933965083257223E-5 2 1.6400947624885836E-4 0.0 0.0 3.2801895249771674E-5 1.0933965083257223E-5 3 2.842830921646878E-4 0.0 0.0 3.2801895249771674E-5 1.0933965083257223E-5 4 2.9521705724794506E-4 0.0 0.0 4.373586033302889E-5 4.373586033302889E-5 5 9.731228924098929E-4 0.0 0.0 6.560379049954335E-5 4.373586033302889E-5 6 0.0013339437401573813 0.0 0.0 7.653775558280057E-5 7.653775558280057E-5 7 0.0015416890767392685 0.0 0.0 7.653775558280057E-5 8.747172066605778E-5 8 0.0019462457848197859 0.0 0.0 9.840568574931502E-5 1.0933965083257223E-4 9 0.0020665194007356154 0.0 0.0 9.840568574931502E-5 1.312075809990867E-4 10 0.0031817838392278522 0.0 0.0 1.312075809990867E-4 1.312075809990867E-4 11 0.0033348593503934533 1.0933965083257223E-5 0.0 1.312075809990867E-4 1.312075809990867E-4 12 0.003564472617141855 1.0933965083257223E-5 0.0 1.312075809990867E-4 1.312075809990867E-4 13 0.0037940858838902566 1.0933965083257223E-5 0.0 1.312075809990867E-4 1.5307551116560113E-4 14 0.004297048277720089 1.0933965083257223E-5 0.0 1.7494344133211557E-4 2.1867930166514447E-4 15 0.0046360011953010625 1.0933965083257223E-5 0.0 2.1867930166514447E-4 3.0615102233120227E-4 16 0.004898416357299236 1.0933965083257223E-5 0.0 2.1867930166514447E-4 3.608208477474884E-4 17 0.0049421522176322655 1.0933965083257223E-5 0.0 2.296132667484017E-4 3.8268877791400286E-4 18 0.005106161693881123 1.0933965083257223E-5 0.0 2.296132667484017E-4 4.592265334968034E-4 19 0.005281105135213239 1.0933965083257223E-5 0.0 2.4054723183165893E-4 4.592265334968034E-4 20 0.006625982840453877 1.0933965083257223E-5 0.0 2.733491270814306E-4 4.592265334968034E-4 21 0.009446945831934242 1.0933965083257223E-5 0.0 4.701604985800606E-4 4.8109446366331786E-4 22 0.00964375720343287 1.0933965083257223E-5 0.0 5.466982541628612E-4 4.920284287465751E-4 23 0.009796832714598473 1.0933965083257223E-5 0.0 5.904341144958901E-4 6.669718700786907E-4 24 0.010212323387762247 1.0933965083257223E-5 0.0 7.653775558280057E-4 6.669718700786907E-4 25 0.010529408375176706 1.0933965083257223E-5 0.0 8.637832415773207E-4 6.888398002452051E-4 26 0.012311644683747633 1.0933965083257223E-5 0.0 0.0010387266829094363 6.997737653284623E-4 27 0.012694333461661636 1.0933965083257223E-5 0.0 0.001957179749903043 7.216416954949768E-4 28 0.013317569471407298 1.0933965083257223E-5 0.0 0.004297048277720089 7.435096256614912E-4 29 0.01335037136665707 1.0933965083257223E-5 0.0 0.00929387032076864 7.544435907447484E-4 30 0.0134706449825729 1.0933965083257223E-5 0.0 0.015187277500644284 7.544435907447484E-4 31 0.013776796004904102 1.0933965083257223E-5 0.0 0.0345841315583426 7.872454859945201E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 17870 0.0 14.628147 1 TATACCG 375 0.0 13.32 5 TAATCCC 2985 0.0 12.519262 5 TTAATCC 3220 0.0 12.180124 4 TCGTTAC 1440 0.0 11.690972 23 TTTAATC 3745 0.0 11.361816 3 TAGATCG 370 0.0 11.0 5 GTATCAA 23980 0.0 10.893244 2 CCTTTAA 4120 0.0 10.731796 1 TAGACTG 1220 0.0 10.463115 5 AACGCAG 27395 0.0 10.4537325 5 ATACCGT 465 0.0 10.344086 6 CTCGTTA 1690 0.0 10.28994 22 TCTATAC 860 0.0 10.110465 3 GTATACG 295 2.8556315E-8 10.033898 1 CGTTACG 1150 0.0 9.973913 24 CTTTAAT 4440 0.0 9.958333 2 GGCGGGT 820 0.0 9.701219 33 TCTACAC 1710 0.0 9.520468 3 CGCGTAA 175 0.0010993957 9.514285 10 >>END_MODULE