##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727583.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10265486 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.950127543888325 31.0 31.0 34.0 30.0 34.0 2 32.12980973331413 33.0 31.0 34.0 30.0 34.0 3 32.19524024483595 34.0 31.0 34.0 30.0 34.0 4 35.84539972096791 37.0 35.0 37.0 35.0 37.0 5 35.75522571459354 37.0 35.0 37.0 35.0 37.0 6 35.79985000223078 37.0 35.0 37.0 35.0 37.0 7 35.71676801273705 37.0 35.0 37.0 33.0 37.0 8 35.69674655442519 37.0 35.0 37.0 33.0 37.0 9 37.360715021188476 39.0 37.0 39.0 34.0 39.0 10 37.23585020718941 39.0 37.0 39.0 33.0 39.0 11 37.30791752090452 39.0 37.0 39.0 34.0 39.0 12 37.15652098692648 39.0 37.0 39.0 33.0 39.0 13 37.19147539629395 39.0 37.0 39.0 33.0 39.0 14 38.337490597132955 40.0 38.0 41.0 33.0 41.0 15 38.33982044298731 40.0 38.0 41.0 33.0 41.0 16 38.26726187147886 40.0 38.0 41.0 33.0 41.0 17 38.244635373327675 40.0 38.0 41.0 33.0 41.0 18 38.181023480037865 40.0 38.0 41.0 33.0 41.0 19 38.18671342009526 40.0 38.0 41.0 33.0 41.0 20 38.10713102136616 40.0 37.0 41.0 33.0 41.0 21 38.013593998374745 40.0 37.0 41.0 33.0 41.0 22 37.913259245592464 40.0 37.0 41.0 32.0 41.0 23 37.81520465762654 40.0 37.0 41.0 32.0 41.0 24 37.70630099734197 40.0 37.0 41.0 32.0 41.0 25 37.938145549075806 40.0 37.0 41.0 33.0 41.0 26 37.875038551511345 40.0 37.0 41.0 33.0 41.0 27 37.81704860344654 40.0 37.0 41.0 32.0 41.0 28 37.74831050375988 40.0 37.0 41.0 32.0 41.0 29 37.67807242638098 40.0 37.0 41.0 32.0 41.0 30 37.56486707010267 40.0 37.0 41.0 32.0 41.0 31 37.44682102727528 40.0 36.0 41.0 32.0 41.0 32 37.32662739981332 40.0 36.0 41.0 31.0 41.0 33 37.23579721408222 40.0 36.0 41.0 31.0 41.0 34 37.12847886597868 40.0 36.0 41.0 31.0 41.0 35 36.985252427405776 39.0 35.0 41.0 31.0 41.0 36 36.88162577008044 39.0 35.0 41.0 30.0 41.0 37 36.798682984906904 39.0 35.0 41.0 30.0 41.0 38 36.671586907819076 39.0 35.0 41.0 30.0 41.0 39 36.53153089878063 39.0 35.0 41.0 30.0 41.0 40 36.400208329152655 39.0 35.0 41.0 30.0 41.0 41 36.2771399230392 39.0 35.0 41.0 29.0 41.0 42 36.11037061469861 39.0 35.0 41.0 28.0 41.0 43 35.952696832863055 39.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 3.0 13 11.0 14 21.0 15 49.0 16 119.0 17 292.0 18 638.0 19 1343.0 20 2736.0 21 5325.0 22 9367.0 23 15911.0 24 24995.0 25 38321.0 26 55882.0 27 80660.0 28 112218.0 29 151164.0 30 198376.0 31 255710.0 32 323256.0 33 407168.0 34 523763.0 35 671616.0 36 889723.0 37 1284375.0 38 1940664.0 39 3271777.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76608043691258 19.058181950664586 12.935062207478534 25.240675404944295 2 19.44588887462318 22.325392095415648 33.98050516069088 24.24821386927029 3 20.261583328836064 23.650015206294178 30.57481155787461 25.51358990699515 4 15.077737186529697 16.62630488220431 34.29857095903691 33.99738697222908 5 15.075662272589918 36.431153868409154 33.501336419922055 14.991847439078871 6 33.76623376623377 35.17969826270281 14.964639764741777 16.08942820632165 7 28.63307202406199 31.09240030135933 20.996492518717574 19.278035155861104 8 27.256498133649004 34.12904172291501 19.403513871627702 19.21094627180827 9 27.139932780581454 14.232623764719957 19.549468968152116 39.07797448654647 10 17.15254397112811 27.56498815545606 32.280556419832436 23.001911453583396 11 35.24198464641616 22.538406851852898 20.915950788886175 21.30365771284477 12 21.667907393765866 26.282038668213076 29.326463452387934 22.72359048563312 13 31.557268696289686 20.46805187791401 23.874894963570163 24.099784462226143 14 22.08248104376159 21.70254774104217 26.270261339794338 29.944709875401905 15 25.61354620716447 28.19269345844902 22.94822670840913 23.245533625977377 16 23.693101330029577 26.283012806212973 25.564342496789727 24.459543366967722 17 23.689487278049963 26.105982707491883 25.998730113703335 24.20579990075482 18 23.911074448886296 24.954181419174894 26.850604053232356 24.284140078706454 19 25.00945400928899 24.881608138182646 27.581139363494334 22.52779848903403 20 24.411781380832824 24.92593141717791 27.6507707477269 23.01151645426237 21 24.170565329298583 25.22078350698642 27.554165482277217 23.054485681437782 22 23.98101755727883 25.317340065536108 27.078396483128024 23.62324589405704 23 23.520669162667993 25.33164041137458 27.2200751138329 23.92761531212453 24 23.294698370832126 25.43237602194382 27.39212736737452 23.88079823984953 25 23.65573339635357 25.214938678987043 27.320927620962127 23.808400303697262 26 23.427561052637934 25.59323542986664 27.400992023173576 23.578211494321845 27 23.977111263899246 25.644874485241125 27.163029592558992 23.21498465830064 28 23.20742534742145 26.016323045981455 26.98989604583748 23.786355560759617 29 23.340531563727232 26.231266595658504 27.215009596233436 23.21319224438083 30 23.691766760969717 25.958459248787634 27.079468034927913 23.270305955314733 31 23.459337434194545 25.536189908592732 27.43996728454941 23.564505372663312 32 23.030015334880392 26.040958995998825 27.102262864125475 23.8267628049953 33 23.075234820835565 25.635610432862116 27.43472642210997 23.854428324192348 34 23.483759073851935 25.869637345957123 27.48321901174479 23.163384568446148 35 23.596057702479943 26.2059487490412 26.952011819021525 23.24598172945733 36 23.180198190324354 26.126439605489697 27.33388365636074 23.35947854782521 37 23.44923562313562 26.19781469674207 26.93574371442326 23.417205965699043 38 23.205214054161683 26.110346845731414 27.391689005274568 23.292750094832336 39 23.045270335958765 26.387810572241783 27.416899696711877 23.15001939508758 40 23.619641583457422 25.890844330214858 27.422637369531262 23.066876716796457 41 22.987562400844926 26.02772046058024 27.456888061607604 23.527829076967226 42 22.929766793311103 26.006503734942505 27.222831924372603 23.840897547373793 43 22.860544547038494 25.899358296333947 27.195906750055478 24.04419040657208 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2564.0 1 2689.5 2 2815.0 3 5422.0 4 8029.0 5 8029.0 6 10644.5 7 13260.0 8 11910.5 9 10561.0 10 15578.5 11 20596.0 12 20596.0 13 42047.0 14 63498.0 15 93229.0 16 122960.0 17 112634.0 18 102308.0 19 102308.0 20 121742.0 21 141176.0 22 117629.0 23 94082.0 24 109061.0 25 124040.0 26 124040.0 27 147701.5 28 171363.0 29 196740.5 30 222118.0 31 252221.0 32 282324.0 33 282324.0 34 316394.0 35 350464.0 36 388020.5 37 425577.0 38 461346.5 39 497116.0 40 497116.0 41 538121.5 42 579127.0 43 625241.5 44 671356.0 45 701011.0 46 730666.0 47 730666.0 48 774104.5 49 817543.0 50 829698.5 51 841854.0 52 831283.0 53 820712.0 54 820712.0 55 770952.5 56 721193.0 57 668310.5 58 615428.0 59 551903.0 60 488378.0 61 488378.0 62 425977.5 63 363577.0 64 317598.0 65 271619.0 66 237757.0 67 203895.0 68 203895.0 69 177174.5 70 150454.0 71 135816.0 72 121178.0 73 100152.0 74 79126.0 75 79126.0 76 66866.5 77 54607.0 78 44689.5 79 34772.0 80 27023.0 81 19274.0 82 19274.0 83 15328.5 84 11383.0 85 9631.0 86 7879.0 87 5853.0 88 3827.0 89 3827.0 90 2778.0 91 1729.0 92 1196.5 93 664.0 94 480.5 95 297.0 96 297.0 97 181.5 98 66.0 99 48.5 100 31.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.0265486E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.60195932494628 #Duplication Level Percentage of deduplicated Percentage of total 1 83.2324708290365 43.78191045063756 2 9.724141789400619 10.230178217521233 3 2.7256969508772415 4.301310004265243 4 1.2305912046326644 2.5892603396689626 5 0.6945135960282542 1.8266387964450201 6 0.4196129417351251 1.3243477736023261 7 0.2919371636957728 1.0749526767115656 8 0.2177483544373882 0.9163192066551584 9 0.1725523481640496 0.8168932439594375 >10 1.059611385261418 10.784452270724245 >50 0.12146300187041374 4.491633155976118 >100 0.09858242954131574 10.168856835582044 >500 0.00795445231665121 2.80482645839605 >1k 0.002938727582687363 2.5184254958888546 >5k 1.1089525199605896E-4 0.3795927656496008 >10k+ 7.393016799737265E-5 1.9904023083165527 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 67847 0.6609234087894134 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 64476 0.6280852168129205 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 46204 0.4500907214719303 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26201 0.255233897352741 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.896551999583848E-5 0.0 0.0 4.8706899994798106E-5 2.9224139996878863E-5 2 3.019827799677482E-4 0.0 0.0 5.8448279993757726E-5 2.9224139996878863E-5 3 4.286207199542233E-4 0.0 0.0 5.8448279993757726E-5 2.9224139996878863E-5 4 4.675862399500618E-4 0.0 0.0 1.0715517998855582E-4 3.896551999583848E-5 5 0.0018118966798064894 0.0 0.0 1.7534483998127317E-4 3.896551999583848E-5 6 0.0025814656997242996 0.0 0.0 1.9482759997919242E-4 5.8448279993757726E-5 7 0.0029029312396899667 0.0 0.0 2.0456897997815204E-4 5.8448279993757726E-5 8 0.003545862319621302 0.0 0.0 2.2405173997607126E-4 5.8448279993757726E-5 9 0.0037406899196004944 0.0 0.0 2.6301725997190977E-4 6.818965999271735E-5 10 0.005455172799417388 0.0 0.0 3.6043105996150595E-4 6.818965999271735E-5 11 0.005844827999375773 0.0 0.0 3.6043105996150595E-4 7.793103999167696E-5 12 0.006117586639346642 0.0 0.0 3.7017243996046557E-4 8.767241999063659E-5 13 0.006692328059285259 0.0 0.0 3.8965519995838485E-4 9.741379998959621E-5 14 0.007510603979197867 0.0 0.0 4.8706899994798103E-4 1.1689655998751545E-4 15 0.008007414359144809 0.0 0.0 5.552586599406983E-4 1.1689655998751545E-4 16 0.008572414399084466 0.0 0.0 5.844827999375772E-4 1.363793199854347E-4 17 0.008786724759061578 0.0 0.0 5.942241799365369E-4 1.363793199854347E-4 18 0.008923104079047013 0.0 0.0 6.331896999323753E-4 1.7534483998127317E-4 19 0.009400431698996034 0.0 0.0 6.721552199282138E-4 1.7534483998127317E-4 20 0.011416897358780676 0.0 0.0 8.767241999063658E-4 1.9482759997919242E-4 21 0.016005087338290657 0.0 0.0 0.0013150862998595487 2.0456897997815204E-4 22 0.016307070118258406 0.0 0.0 0.0015488794198345796 2.0456897997815204E-4 23 0.01668698393821783 9.74137999895962E-6 0.0 0.0017047414998179336 2.4353449997399052E-4 24 0.017222759838160608 9.74137999895962E-6 0.0 0.0018995690997971261 2.4353449997399052E-4 25 0.01770008745810963 9.74137999895962E-6 0.0 0.002182069119766955 2.5327587997295016E-4 26 0.020047760037858898 9.74137999895962E-6 0.0 0.0029224139996878863 2.6301725997190977E-4 27 0.020632242837796477 9.74137999895962E-6 0.0 0.005669483159394499 2.82500019969829E-4 28 0.021606380837692438 9.74137999895962E-6 0.0 0.013725604418534106 2.82500019969829E-4 29 0.021684311877684114 9.74137999895962E-6 0.0 0.029087760676893427 2.82500019969829E-4 30 0.021888880857662267 9.74137999895962E-6 0.0 0.04845362411482515 2.82500019969829E-4 31 0.02237594985761025 9.74137999895962E-6 0.0 0.10177793822913012 2.922413999687886E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 26590 0.0 18.854834 1 ACGGACT 1160 0.0 17.224138 27 TATCTCG 1335 0.0 15.104869 36 CGGACTC 1370 0.0 14.448906 28 CACGAGA 1490 0.0 13.65772 21 ACGAGAC 1535 0.0 13.618893 22 GTATCAA 38075 0.0 13.147998 2 CGAGACG 1590 0.0 13.147799 23 TAATCCC 5330 0.0 12.981237 5 TTAATCC 5685 0.0 12.854001 4 GGACCGT 1110 0.0 12.5 6 TATACAC 2305 0.0 12.440348 3 CCCACGA 1655 0.0 12.18429 19 GGCGGGT 1035 0.0 12.15459 33 CCACGAG 1665 0.0 12.111111 20 TCTCCGA 1735 0.0 12.04899 11 GCCCACG 1690 0.0 11.9319515 18 TTTAATC 6420 0.0 11.555296 3 TCTATAC 995 0.0 11.527638 3 CCTTTAA 7045 0.0 11.501774 1 >>END_MODULE