##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727581.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10192763 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13477356434168 33.0 31.0 34.0 30.0 34.0 2 32.34574943025753 34.0 31.0 34.0 31.0 34.0 3 32.35080144608484 34.0 31.0 34.0 30.0 34.0 4 35.923314021919275 37.0 35.0 37.0 35.0 37.0 5 35.88757974653193 37.0 35.0 37.0 35.0 37.0 6 35.947137297315756 37.0 35.0 37.0 35.0 37.0 7 35.862117268889705 37.0 35.0 37.0 35.0 37.0 8 35.87751368299253 37.0 35.0 37.0 35.0 37.0 9 37.532372625557954 39.0 37.0 39.0 35.0 39.0 10 37.47532185335811 39.0 37.0 39.0 35.0 39.0 11 37.5275832470548 39.0 37.0 39.0 35.0 39.0 12 37.42263702197334 39.0 37.0 39.0 34.0 39.0 13 37.406005712092 39.0 37.0 39.0 34.0 39.0 14 38.50405420002408 40.0 38.0 41.0 34.0 41.0 15 38.49364298963882 40.0 38.0 41.0 34.0 41.0 16 38.37376950685501 40.0 38.0 41.0 34.0 41.0 17 38.45538349120842 40.0 38.0 41.0 34.0 41.0 18 38.44587193874713 40.0 38.0 41.0 34.0 41.0 19 38.48585834871271 40.0 38.0 41.0 34.0 41.0 20 38.41509588715052 40.0 38.0 41.0 34.0 41.0 21 38.29079269281548 40.0 38.0 41.0 33.0 41.0 22 38.14310516196639 40.0 38.0 41.0 33.0 41.0 23 38.275691095731354 40.0 38.0 41.0 33.0 41.0 24 38.25656124840732 40.0 38.0 41.0 33.0 41.0 25 38.250820116194205 40.0 38.0 41.0 33.0 41.0 26 38.03012392223777 40.0 37.0 41.0 33.0 41.0 27 37.99008816353329 40.0 37.0 41.0 33.0 41.0 28 37.8315287032574 40.0 37.0 41.0 33.0 41.0 29 37.71831514183151 40.0 37.0 41.0 33.0 41.0 30 37.5431914781105 40.0 36.0 41.0 33.0 41.0 31 37.307673787764905 39.0 35.0 41.0 32.0 41.0 32 37.07785906529956 39.0 35.0 41.0 32.0 41.0 33 36.872936219551065 39.0 35.0 41.0 31.0 41.0 34 36.696519089083104 39.0 35.0 41.0 31.0 41.0 35 36.487986231015086 39.0 35.0 41.0 30.0 41.0 36 36.30950822657213 39.0 35.0 41.0 30.0 41.0 37 36.11578725022842 39.0 35.0 41.0 30.0 41.0 38 35.88650516057324 38.0 35.0 41.0 28.0 41.0 39 35.654561672826105 38.0 35.0 41.0 27.0 41.0 40 35.36206904840228 38.0 35.0 41.0 25.0 41.0 41 35.09779536716394 38.0 35.0 40.0 24.0 41.0 42 34.76020162540814 38.0 34.0 40.0 23.0 41.0 43 34.38561330230086 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 14.0 11 16.0 12 46.0 13 48.0 14 82.0 15 151.0 16 258.0 17 537.0 18 1100.0 19 2247.0 20 4364.0 21 7993.0 22 13099.0 23 20479.0 24 31327.0 25 46330.0 26 66456.0 27 91387.0 28 121950.0 29 156970.0 30 195785.0 31 241677.0 32 301569.0 33 385895.0 34 504966.0 35 650318.0 36 881590.0 37 1530824.0 38 1888831.0 39 3046447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.54343988965504 21.122604341923775 14.480205220115488 21.853750548305694 2 19.8677336066776 25.269644746964097 32.31782196839071 22.544799677967596 3 18.74916546180854 26.27231693702679 32.82171870375088 22.156798897413783 4 12.932518886194059 18.74824323885486 34.5597950231944 33.75944285175668 5 13.410711109441081 38.29493533794517 33.30440431117647 14.989949241437284 6 29.500008976957474 38.50727226758829 13.699778951006708 18.292939804447528 7 26.35283484958887 32.774528358993535 21.710962964605375 19.16167382681222 8 28.204756649399187 34.687307062864114 17.951707500704174 19.156228787032525 9 25.86691165094293 13.576652375808207 21.50414956180184 39.05228641144702 10 18.95234883809228 29.360900474189382 29.935533672273163 21.751217015445174 11 31.303239366990088 24.759478857695406 21.36129330192412 22.575988473390385 12 21.319165372529508 30.872345408207764 28.869002448109505 18.93948677115322 13 32.72136318680224 20.610172138800834 26.204572793461402 20.463891880935524 14 20.641311879811195 24.426556371417643 30.773226062452352 24.158905686318814 15 25.400355134324226 28.82630548753071 25.54095489123018 20.232384486914885 16 20.783805137036936 25.704051001676387 29.817538188614805 23.694605672671877 17 21.40037985774809 27.83941900738789 28.56201012424207 22.198191010621947 18 22.710289643740367 23.16342487311831 30.746295190028455 23.37999029311287 19 23.120845643129346 24.212276887042307 32.697395200889105 19.969482268939245 20 22.36015886958227 24.202456193673886 32.97747627409761 20.45990866264623 21 21.102550898122523 25.9301329776823 32.51233252455689 20.454983599638293 22 20.956623832026704 25.73056981703587 32.44571663247738 20.86708971846005 23 20.547009677356375 25.579953149111777 32.73105633869835 21.1419808348335 24 20.212370286643573 26.980309460741903 32.76279454354035 20.044525709074172 25 21.06076634961492 25.89856155784256 32.81569482190452 20.224977270638 26 19.58274709222612 27.15060675893278 33.31647169663417 19.950174452206923 27 21.05996185725107 26.0050586872274 33.42207603571279 19.51290341980874 28 19.678089248224452 26.022904682469317 33.41512993091275 20.883876138393486 29 19.930199495465555 26.598577834096602 32.73910126233682 20.732121408101023 30 19.456304438747374 26.796973499727205 32.44608944601185 21.300632615513575 31 19.51920200636471 26.33782419938539 33.31292996805675 20.830043826193155 32 19.550999076501633 27.12752175244337 32.18109751006671 21.140381660988293 33 19.52341087495118 27.70725660941984 32.582725606393474 20.186606909235504 34 20.68465635863406 27.64385868679572 31.755540671356723 19.91594428321349 35 20.45638655583378 28.973880781884166 31.64536446103966 18.92436820124239 36 19.919770527383008 28.629263723683167 31.41934135032866 20.031624398605167 37 20.107256491689252 27.96514546644516 30.843295385166908 21.08430265669868 38 19.36582848046207 27.964027025841766 32.52871669830839 20.141427795387767 39 19.983374478539332 28.7867578202299 30.37494347705328 20.854924224177488 40 19.54269906991853 28.92298192354713 31.69836284822869 19.835956158305653 41 19.901610583901537 28.49647342923602 30.994147514270665 20.60776847259178 42 19.74039816289263 28.882453167997724 30.456746615221014 20.920402053888626 43 20.152916338778798 28.683861284717405 30.83323923061882 20.329983145884977 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1095.0 1 2422.0 2 3749.0 3 8913.0 4 14077.0 5 14077.0 6 19445.0 7 24813.0 8 23082.0 9 21351.0 10 32338.0 11 43325.0 12 43325.0 13 109545.0 14 175765.0 15 280792.5 16 385820.0 17 327357.0 18 268894.0 19 268894.0 20 317849.0 21 366804.0 22 264567.5 23 162331.0 24 181825.0 25 201319.0 26 201319.0 27 240708.0 28 280097.0 29 330915.5 30 381734.0 31 425819.5 32 469905.0 33 469905.0 34 505230.5 35 540556.0 36 544255.0 37 547954.0 38 560801.5 39 573649.0 40 573649.0 41 585449.0 42 597249.0 43 590963.5 44 584678.0 45 566673.0 46 548668.0 47 548668.0 48 560422.5 49 572177.0 50 567852.5 51 563528.0 52 539350.5 53 515173.0 54 515173.0 55 472086.0 56 428999.0 57 368257.5 58 307516.0 59 282971.5 60 258427.0 61 258427.0 62 253510.5 63 248594.0 64 225035.5 65 201477.0 66 195497.5 67 189518.0 68 189518.0 69 198420.0 70 207322.0 71 191627.5 72 175933.0 73 138794.0 74 101655.0 75 101655.0 76 90021.5 77 78388.0 78 67032.0 79 55676.0 80 46546.0 81 37416.0 82 37416.0 83 30309.0 84 23202.0 85 19218.5 86 15235.0 87 12445.5 88 9656.0 89 9656.0 90 7318.5 91 4981.0 92 3804.5 93 2628.0 94 1764.5 95 901.0 96 901.0 97 639.5 98 378.0 99 264.0 100 150.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.0192763E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.580468005360775 #Duplication Level Percentage of deduplicated Percentage of total 1 71.01341689032587 11.774356867013944 2 12.676522419458205 4.203653487901306 3 5.123170219311492 2.54833679721934 4 2.7339803387706176 1.8132269413708653 5 1.6079290324568416 1.3330107938770686 6 1.034115763124036 1.0287673994590392 7 0.7159199707600342 0.83092017187099 8 0.5191225205525934 0.6885835474307613 9 0.41579268801160557 0.6204633624395443 >10 2.9064876169832674 9.851878433847244 >50 0.5152582297251007 6.074210592455269 >100 0.5976664268757365 21.15441361740954 >500 0.08897083944972684 10.071287659482163 >1k 0.046951858359315785 14.371697557244653 >5k 0.003090502069219137 3.50270403112676 >10k+ 0.0016046837667099366 10.132488739851562 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 226432 2.2214977430555387 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 209528 2.055654585513271 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 135570 1.3300613386183904 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 85336 0.837221467819864 No Hit CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGT 35347 0.346785263230392 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28817 0.28272020059722763 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25533 0.2505012625134127 No Hit ATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTG 20051 0.19671800472550968 No Hit TATCAACGCAGAGTACGGGTCATCTCCCCCAGATCTTGACTAT 19076 0.18715239430172173 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18218 0.17873465712878833 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 16603 0.16289008191400114 No Hit ATACTAAAGTTTGATTAGCCAATAGATTCCTGTGGGGAAAAAA 16407 0.16096714894675762 No Hit GGTATCAACGCAGAGTACGGGTCATCTCCCCCAGATCTTGACT 15522 0.15228451794670395 No Hit CCTCTAATCATTCGCTTTACCGGATAAAACTGCGTACGTCGGG 15433 0.15141134940545561 No Hit GATCTTGACTATATACTAAAGTTTGATTAGCCAATAGATTCCT 14811 0.1453089804992032 No Hit GTATCAACGCAGAGTACGGGTCATCTCCCCCAGATCTTGACTA 14682 0.1440433766585174 No Hit GGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGT 14493 0.14218911986867547 No Hit GAGTACGGGTCATCTCCCCCAGATCTTGACTATATACTAAAGT 14052 0.13786252069237753 No Hit CTTCTTACCCATTTAAAGTTTGAGAATAGGTTGAGATCGTTTC 12562 0.12324430578833237 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 11893 0.11668082540524097 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11836 0.11612160510354258 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11623 0.11403188713403814 No Hit CCCCCAGATCTTGACTATATACTAAAGTTTGATTAGCCAATAG 11480 0.11262893093854924 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 10874 0.10668353615207182 No Hit GGTTGAGATCGTTTCGGCCCCAAGACCTCTAATCATTCGCTTT 10853 0.10647750761986716 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 10850 0.10644807497240934 No Hit CATTTAAAGTTTGAGAATAGGTTGAGATCGTTTCGGCCCCAAG 10356 0.10160149902435679 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.158394146905996E-4 0.0 0.0 2.9432647457809035E-5 0.0 2 0.0027764797435199857 0.0 0.0 9.810882485936345E-5 0.0 3 0.0037673788745995565 9.810882485936346E-6 0.0 1.3735235480310883E-4 0.0 4 0.004091137996635456 9.810882485936346E-6 0.0 1.962176497187269E-4 0.0 5 0.014637836669017027 9.810882485936346E-6 0.0 5.199767717546263E-4 0.0 6 0.02031833762837417 9.810882485936346E-6 0.0 7.456270689311622E-4 0.0 7 0.022888788839689492 9.810882485936346E-6 0.0 8.143032463327166E-4 0.0 8 0.02928548422051999 9.810882485936346E-6 0.0 0.0012263603107420431 0.0 9 0.030963145125615106 9.810882485936346E-6 0.0 0.0013440909005732794 0.0 10 0.04749448211441785 9.810882485936346E-6 0.0 0.002266313854251296 0.0 11 0.05067320803986122 9.810882485936346E-6 0.0 0.002482153268941895 0.0 12 0.05300819807151407 9.810882485936346E-6 0.0 0.00273723621357624 0.0 13 0.05718763401052296 9.810882485936346E-6 0.0 0.003129671513013694 0.0 14 0.06572310177328758 9.810882485936346E-6 0.0 0.00386548769945892 0.0 15 0.07113870890552444 9.810882485936346E-6 0.0 0.004326599176297928 0.0 16 0.07523965778464584 9.810882485936346E-6 0.0 0.004748467123193191 0.0 17 0.07658374868521911 9.810882485936346E-6 0.0 0.004925063007940046 0.0 18 0.07859497959483606 9.810882485936346E-6 0.0 0.005121280657658772 0.0 19 0.0825193325892106 9.810882485936346E-6 0.0 0.0056314465469274625 0.0 20 0.10537868878144228 9.810882485936346E-6 0.0 0.007623055691572541 0.0 21 0.15333428237269914 9.810882485936346E-6 0.0 0.012518686052054777 0.0 22 0.15703298506989713 9.810882485936346E-6 0.0 0.013725424597824947 0.0 23 0.16031963070268582 9.810882485936346E-6 0.0 0.014726134611390454 0.0 24 0.16643181049142416 9.810882485936346E-6 0.0 0.016492093458858995 0.0 25 0.17031691995585496 9.810882485936346E-6 0.0 0.01774788641705885 0.0 26 0.19347060262266472 9.810882485936346E-6 0.0 0.021162073522164697 0.0 27 0.19962202594134681 9.810882485936346E-6 0.0 0.02512567004648298 0.0 28 0.20827522429394268 9.810882485936346E-6 0.0 0.03550558371660363 0.0 29 0.2094427193097691 9.810882485936346E-6 0.0 0.06422203675293932 0.0 30 0.21212109022842973 9.810882485936346E-6 0.0 0.09957064634976796 0.0 31 0.2170853967663135 9.810882485936346E-6 0.0 0.17537933531859812 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACACA 5915 0.0 27.304312 4 TATACAC 5970 0.0 27.145727 3 GAGACTA 6110 0.0 25.887888 24 GCGAATC 5950 0.0 25.713446 33 ATCTCCG 6410 0.0 24.907177 10 TAAGGCG 6435 0.0 24.522923 29 CGAGACT 6520 0.0 24.515337 23 ACATCTC 6650 0.0 24.481203 8 GCCCACG 6535 0.0 24.345829 18 GGCGAAT 6340 0.0 24.335962 32 CACATCT 6710 0.0 24.234726 7 CACGAGA 6630 0.0 23.913273 21 AGGCGAA 6600 0.0 23.797726 31 ACGAGAC 6800 0.0 23.587502 22 CGAATCT 6545 0.0 23.488922 34 CCGAGCC 6985 0.0 23.386541 14 TTATACA 7055 0.0 23.36428 2 CTCCGAG 6885 0.0 23.269428 12 TACACAT 7045 0.0 23.213627 5 AAGGCGA 6785 0.0 23.20339 30 >>END_MODULE