##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727578.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1261589 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229018325302455 31.0 31.0 33.0 30.0 34.0 2 31.500242154933183 31.0 31.0 34.0 30.0 34.0 3 31.498925561335746 31.0 31.0 34.0 30.0 34.0 4 35.28125958612512 37.0 35.0 37.0 33.0 37.0 5 34.940522626624045 35.0 35.0 37.0 32.0 37.0 6 35.11267457151259 36.0 35.0 37.0 32.0 37.0 7 35.08587345006971 36.0 35.0 37.0 32.0 37.0 8 35.06079079636871 36.0 35.0 37.0 32.0 37.0 9 36.67880744045802 38.0 35.0 39.0 32.0 39.0 10 36.37627309686435 38.0 35.0 39.0 32.0 39.0 11 36.523909133640196 38.0 35.0 39.0 32.0 39.0 12 36.24599612076516 38.0 35.0 39.0 32.0 39.0 13 36.30723952095334 38.0 35.0 39.0 32.0 39.0 14 37.25410256430581 39.0 36.0 40.0 32.0 41.0 15 37.18112871941655 39.0 36.0 40.0 32.0 41.0 16 37.069865859642086 39.0 36.0 40.0 31.0 41.0 17 36.91354474396971 38.0 36.0 40.0 31.0 41.0 18 36.771110084187484 38.0 36.0 40.0 31.0 41.0 19 36.64921539423695 38.0 36.0 40.0 30.0 41.0 20 36.461640835486044 38.0 35.0 40.0 30.0 41.0 21 36.297559664835376 38.0 35.0 40.0 30.0 41.0 22 36.15076225299999 38.0 34.0 40.0 29.0 41.0 23 36.50870846210612 38.0 35.0 40.0 30.0 41.0 24 36.5704092220208 38.0 35.0 40.0 30.0 41.0 25 36.58885262950137 38.0 35.0 40.0 30.0 41.0 26 36.396604599437694 38.0 35.0 40.0 30.0 41.0 27 36.23401044238655 38.0 35.0 40.0 29.0 41.0 28 36.05225869914845 38.0 35.0 40.0 29.0 41.0 29 35.914635431983 38.0 35.0 40.0 28.0 41.0 30 35.78483721719197 38.0 34.0 40.0 27.0 41.0 31 35.63917963774256 38.0 34.0 40.0 27.0 41.0 32 35.475595459377026 38.0 34.0 40.0 27.0 41.0 33 35.338913069153264 38.0 34.0 40.0 26.0 41.0 34 35.1541310204829 38.0 34.0 40.0 26.0 41.0 35 34.99842103886448 38.0 33.0 40.0 25.0 41.0 36 34.880920807014014 38.0 33.0 40.0 25.0 41.0 37 34.753815228255796 38.0 33.0 40.0 25.0 41.0 38 34.565230039260015 38.0 33.0 40.0 24.0 41.0 39 34.38661957261834 38.0 33.0 40.0 24.0 41.0 40 34.225444261165876 37.0 33.0 40.0 23.0 41.0 41 34.07584244948236 37.0 32.0 40.0 23.0 41.0 42 33.91734946959747 37.0 32.0 40.0 23.0 41.0 43 33.736466472044384 37.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 9.0 13 19.0 14 20.0 15 58.0 16 136.0 17 257.0 18 461.0 19 781.0 20 1444.0 21 2301.0 22 3483.0 23 5457.0 24 7674.0 25 10711.0 26 14449.0 27 18917.0 28 23917.0 29 30481.0 30 37562.0 31 46784.0 32 57565.0 33 71439.0 34 90974.0 35 117187.0 36 156880.0 37 211469.0 38 246684.0 39 104463.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.97743242846918 22.430759938458564 13.996872198473511 24.594935434598746 2 26.601611142773123 23.31702321437489 27.38958567330565 22.691779969546342 3 25.800320072543435 23.180132356892777 26.77076290297395 24.248784667589838 4 22.692414090484302 17.338689541522637 28.312310903154675 31.65658546483839 5 16.889018531391763 35.95021833576545 31.63787889716857 15.522884235674217 6 37.70586141762492 33.970254972102644 13.026825693629224 15.297057916643217 7 31.29521579531844 29.226792560810217 18.82189841541104 20.6560932284603 8 28.828564611771345 32.99045885783722 17.819670272965286 20.36130625742615 9 28.09092343068939 13.246469333515115 17.009263714252423 41.65334352154307 10 17.927470832418482 27.05611732505594 31.09277268587472 23.923639156650857 11 39.21031334293498 20.553444901628026 18.673197055459426 21.563044699977567 12 23.269543409145133 24.47936689365554 27.021874794406102 25.229214902793224 13 33.180695139225215 19.108996670072425 21.45904886615213 26.25125932455023 14 23.7685173222024 19.820242567111794 22.769063458860213 33.642176651825594 15 27.40797518050649 26.744288353814117 20.011509295023973 25.83622717065542 16 26.715911441840408 25.100963943090814 22.255187703760893 25.92793691130788 17 26.450690359538648 24.791512925366344 22.78087396132972 25.97692275376529 18 26.568161263295732 24.024622916020984 23.4206227226141 25.986593098069182 19 27.697055063098997 23.778504726975267 23.366009056832297 25.158431153093442 20 27.1154076327552 23.612127245878014 23.558068435916926 25.71439668544986 21 27.1335593446043 23.596274222429017 23.417531383041545 25.852635049925134 22 27.217342573532267 23.886463816662953 22.730857672348126 26.165335937456653 23 27.02774041308223 23.68544747932964 23.035949108624123 26.250862998964003 24 26.54287569089458 23.88051893286958 23.084538625495306 26.492066750740534 25 26.890056904427674 23.787303154989463 23.273189604538402 26.049450336044465 26 26.575057328496047 24.02311687879333 23.1084766909033 26.293349101807323 27 27.125870628231542 24.148038703571448 22.98720106151845 25.738889606678562 28 26.573709821502884 24.32361093826912 23.006303954774495 26.096375285453504 29 26.74626998174524 24.296581533288574 23.04712549015567 25.91002299481051 30 26.889184988137977 24.140349987198682 22.929020465460624 26.04144455920272 31 27.181356210303036 23.516374984246056 23.29498751178078 26.007281293670125 32 26.64988359917533 23.954631817493652 23.03206511787912 26.363419465451905 33 26.769019070394556 23.470004890657734 23.20922265492169 26.551753384026018 34 27.08084804163638 23.5941340642634 23.332796972706642 25.992220921393578 35 27.2057698664145 23.83438663463299 23.170065687002662 25.78977781194985 36 26.787487842712643 23.691867953826485 23.40461116893061 26.11603303453026 37 26.9869981428183 24.021135250862205 23.07241106255682 25.919455543762666 38 26.837662661928725 23.563696259241322 23.445274174077294 26.153366904752655 39 26.67294974829362 24.05339615358092 23.37924633141221 25.894407766713247 40 27.139345698163194 23.50321697478339 23.551410166068347 25.806027160985074 41 26.629750259395095 23.646766102114082 23.463663681278135 26.259819957212688 42 26.890770290482873 23.4745230023407 23.146920272767122 26.487786434409305 43 26.786615926422947 23.252897734523685 23.458907774243436 26.501578564809936 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 45.0 2 52.0 3 47.5 4 43.0 5 43.0 6 72.0 7 101.0 8 122.5 9 144.0 10 206.0 11 268.0 12 268.0 13 778.5 14 1289.0 15 1915.0 16 2541.0 17 2251.5 18 1962.0 19 1962.0 20 2711.0 21 3460.0 22 3455.5 23 3451.0 24 4336.5 25 5222.0 26 5222.0 27 6852.5 28 8483.0 29 10362.0 30 12241.0 31 14902.5 32 17564.0 33 17564.0 34 20899.5 35 24235.0 36 28659.5 37 33084.0 38 38833.5 39 44583.0 40 44583.0 41 50074.5 42 55566.0 43 63020.0 44 70474.0 45 78111.5 46 85749.0 47 85749.0 48 93956.5 49 102164.0 50 108384.5 51 114605.0 52 116159.0 53 117713.0 54 117713.0 55 115228.0 56 112743.0 57 107759.5 58 102776.0 59 95576.5 60 88377.0 61 88377.0 62 79424.5 63 70472.0 64 61554.0 65 52636.0 66 45414.5 67 38193.0 68 38193.0 69 32862.0 70 27531.0 71 24254.5 72 20978.0 73 17745.5 74 14513.0 75 14513.0 76 12554.0 77 10595.0 78 8812.5 79 7030.0 80 5611.0 81 4192.0 82 4192.0 83 3402.0 84 2612.0 85 2171.0 86 1730.0 87 1434.5 88 1139.0 89 1139.0 90 860.5 91 582.0 92 429.0 93 276.0 94 212.0 95 148.0 96 148.0 97 85.0 98 22.0 99 17.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1261589.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.5181728427792 #Duplication Level Percentage of deduplicated Percentage of total 1 85.77977643780017 57.9169377194235 2 7.896044379998776 10.662529784460252 3 2.441102104724749 4.94456261501033 4 1.1717725352398254 3.1646376226697637 5 0.6535661986869836 2.206379778357296 6 0.4388113811362886 1.777664560616315 7 0.29559936625819583 1.3970830372265801 8 0.20863114761106022 1.1269115107832754 9 0.17076255836809145 1.037661833787477 >10 0.8684503871419407 10.490552246908328 >50 0.053467731813582615 2.477120097770825 >100 0.02130939022961628 2.3893049259805217 >500 4.709206604659938E-4 0.18505098883272805 >1k 2.354603302329969E-4 0.22360327817287973 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1459 0.11564780606045234 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1354 0.10732496874972754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.5853023448999634E-4 0.0 3 0.0 0.0 0.0 2.3779535173499452E-4 0.0 4 0.0 0.0 0.0 3.170604689799927E-4 0.0 5 3.9632558622499086E-4 0.0 0.0 7.133860552049836E-4 0.0 6 6.341209379599853E-4 0.0 0.0 8.7191628969498E-4 7.926511724499817E-5 7 7.133860552049836E-4 0.0 0.0 8.7191628969498E-4 7.926511724499817E-5 8 7.133860552049836E-4 0.0 0.0 0.001347506993164969 7.926511724499817E-5 9 9.511814069399781E-4 0.0 0.0 0.0014267721104099672 7.926511724499817E-5 10 0.0015060372276549652 0.0 0.0 0.0021401581656149507 7.926511724499817E-5 11 0.00174383257938996 0.0 0.0 0.002219423282859949 7.926511724499817E-5 12 0.00174383257938996 0.0 0.0 0.002219423282859949 7.926511724499817E-5 13 0.0020608930483699524 0.0 0.0 0.0025364837518399414 7.926511724499817E-5 14 0.002219423282859949 0.0 0.0 0.0028535442208199343 2.3779535173499452E-4 15 0.002457218634594943 0.0 0.0 0.0030120744553099304 2.3779535173499452E-4 16 0.002695013986329938 0.0 0.0 0.0033291349242899233 3.170604689799927E-4 17 0.002695013986329938 0.0 0.0 0.0034084000415349216 3.170604689799927E-4 18 0.002774279103574936 0.0 0.0 0.00348766515877992 3.9632558622499086E-4 19 0.0030913395725549286 0.0 0.0 0.003646195393269916 4.7559070346998904E-4 20 0.004359581448474899 0.0 0.0 0.004518111682964896 4.7559070346998904E-4 21 0.00697533031755984 0.0 0.0 0.006658269848579847 5.548558207149872E-4 22 0.007133860552049835 0.0 0.0 0.0067375349658248445 5.548558207149872E-4 23 0.007213125669294834 0.0 0.0 0.00697533031755984 5.548558207149872E-4 24 0.007530186138274827 0.0 0.0 0.00737165590378483 5.548558207149872E-4 25 0.007530186138274827 0.0 0.0 0.007609451255519825 6.341209379599853E-4 26 0.009036223365929791 0.0 0.0 0.008798428014194797 6.341209379599853E-4 27 0.00911548848317479 0.0 0.0 0.009591079186644778 6.341209379599853E-4 28 0.009908139655624771 0.0 0.0 0.01212756293848472 6.341209379599853E-4 29 0.00998740477286977 0.0 0.0 0.014029925752364676 6.341209379599853E-4 30 0.01038373035909476 0.0 0.0 0.016804204855939614 6.341209379599853E-4 31 0.010700790828074753 0.0 0.0 0.024492921228704435 6.341209379599853E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTAC 25 0.0054965434 29.6 31 ATACCGT 50 2.7023043E-4 22.2 6 CACCGTA 45 0.0038260121 20.555555 7 GGTATCA 1405 0.0 20.145908 1 TCTATAC 80 1.6168737E-5 18.5 3 TATACCC 245 0.0 17.367348 3 CCGATTT 225 0.0 17.266666 21 CTACTCG 285 0.0 16.228071 14 TACTCGG 290 0.0 15.9482765 15 GCACGTC 225 0.0 15.622222 28 TTGCACG 225 0.0 15.622222 26 GTATCAA 1830 0.0 15.467214 2 GACCGAT 240 0.0 15.416666 19 CTATACC 255 0.0 15.235294 2 TCGTACA 110 1.4520125E-5 15.136364 2 TAGTCCC 310 0.0 14.919354 5 ACGACCG 250 0.0 14.799999 17 TCGGACG 240 0.0 14.645833 13 ACCGATT 255 0.0 14.509804 20 CACGTCA 245 0.0 14.34694 29 >>END_MODULE