##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727577.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2310240 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.765560288108595 31.0 31.0 34.0 30.0 34.0 2 32.02760449130826 31.0 31.0 34.0 30.0 34.0 3 32.09358638063578 33.0 31.0 34.0 30.0 34.0 4 35.76219180691184 37.0 35.0 37.0 35.0 37.0 5 35.57507055544013 37.0 35.0 37.0 33.0 37.0 6 35.62294956368169 37.0 35.0 37.0 33.0 37.0 7 35.56032533416442 37.0 35.0 37.0 33.0 37.0 8 35.535764249601776 37.0 35.0 37.0 33.0 37.0 9 37.16229396080061 39.0 37.0 39.0 33.0 39.0 10 36.99313404667913 39.0 37.0 39.0 33.0 39.0 11 37.081071663550105 39.0 37.0 39.0 33.0 39.0 12 36.88702688898123 39.0 37.0 39.0 33.0 39.0 13 36.902600595609115 39.0 37.0 39.0 33.0 39.0 14 38.01426864741325 40.0 37.0 41.0 33.0 41.0 15 37.96404269686266 40.0 37.0 41.0 33.0 41.0 16 37.89413567421567 40.0 37.0 41.0 33.0 41.0 17 37.790200152365124 40.0 37.0 41.0 32.0 41.0 18 37.682301838769995 39.0 37.0 41.0 32.0 41.0 19 37.61967414640903 39.0 37.0 41.0 32.0 41.0 20 37.493528378004015 39.0 36.0 41.0 32.0 41.0 21 37.36098327446499 39.0 36.0 41.0 31.0 41.0 22 37.24234624974029 39.0 36.0 40.0 31.0 41.0 23 37.56885301959969 39.0 37.0 41.0 32.0 41.0 24 37.665335203268924 39.0 37.0 41.0 32.0 41.0 25 37.69813049726435 40.0 37.0 41.0 32.0 41.0 26 37.5618113269617 40.0 37.0 41.0 32.0 41.0 27 37.452385466445044 40.0 37.0 41.0 32.0 41.0 28 37.35273564651292 40.0 37.0 41.0 31.0 41.0 29 37.265168121061016 39.0 36.0 41.0 31.0 41.0 30 37.17896322460004 39.0 36.0 41.0 31.0 41.0 31 37.06857642496018 39.0 36.0 41.0 31.0 41.0 32 36.95363641872706 39.0 36.0 41.0 30.0 41.0 33 36.84390972366507 39.0 36.0 41.0 30.0 41.0 34 36.719281979361455 39.0 36.0 40.0 30.0 41.0 35 36.61738131103262 39.0 35.0 40.0 30.0 41.0 36 36.52604274880532 39.0 35.0 40.0 30.0 41.0 37 36.42700628506129 39.0 35.0 40.0 30.0 41.0 38 36.290972799362834 39.0 35.0 40.0 29.0 41.0 39 36.17780576909758 39.0 35.0 40.0 29.0 41.0 40 36.04904858369693 38.0 35.0 40.0 28.0 41.0 41 35.94294315742087 38.0 35.0 40.0 28.0 41.0 42 35.81208056305838 38.0 35.0 40.0 27.0 41.0 43 35.65974227785858 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 6.0 13 9.0 14 15.0 15 43.0 16 52.0 17 146.0 18 260.0 19 514.0 20 909.0 21 1673.0 22 3000.0 23 4863.0 24 7260.0 25 10724.0 26 15248.0 27 21156.0 28 29107.0 29 38510.0 30 48540.0 31 62653.0 32 77791.0 33 97791.0 34 124743.0 35 161745.0 36 219862.0 37 323168.0 38 546629.0 39 513822.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.58471847080823 20.83783503012674 13.536861971050627 26.040584528014403 2 21.30687720756285 22.662364083385274 31.69480227162546 24.335956437426415 3 20.934664796731077 23.669488884271765 29.8739957753307 25.521850543666456 4 17.197520603919937 17.088484313318098 32.73984521088718 32.974149871874786 5 15.33689140522197 36.122783780040166 33.578935521850546 14.96138929288732 6 35.321914606274674 35.57180206385483 14.212679202160814 14.893604127709676 7 29.357252926102916 30.48626982478011 20.42389535286377 19.732581896253205 8 27.417541034697695 33.959415471985594 18.984521088718058 19.638522404598657 9 26.804920700879563 14.105634046679134 18.83760994528707 40.25183530715423 10 16.65930812383129 27.702836068979845 32.84598136990096 22.791874437287902 11 36.6941962739802 22.012951035390262 20.650495186647273 20.64235750398227 12 22.044809197312834 25.543926172172586 28.705978599626015 23.705286030888566 13 31.020673176812796 20.53531234850059 23.47838319828243 24.96563127640418 14 22.675869173765495 21.16520361520881 24.792489092042384 31.366438118983307 15 25.32957614793268 28.387310409308125 21.654806427037883 24.628307015721308 16 24.8758137682665 26.375831082484936 23.905957822563888 24.842397326684672 17 24.339852136574557 26.497853036913916 24.688387353694853 24.473907472816677 18 24.72582935106309 25.423202784126325 25.452896668744373 24.39807119606621 19 25.50154962255004 25.259193849989614 25.518733984347946 23.720522543112406 20 24.942213795969252 25.284342752268163 25.621796869589307 24.15164658217328 21 24.861789251333192 25.320226469977147 25.598465960246553 24.219518318443107 22 25.090077221414226 25.244130479950133 25.199632938569156 24.466159360066484 23 24.89390712653231 25.256553431678093 25.17517660502805 24.67436283676155 24 24.580822771660088 25.613529330286035 25.219024863217676 24.586623034836208 25 24.89975067525452 25.357711752891475 25.377969388461807 24.3645681833922 26 24.622030611538197 25.500467483897776 25.428137336380637 24.449364568183395 27 24.837765773252997 25.756544774568873 25.226772975967865 24.17891647621026 28 24.658303899161993 25.31715319620472 25.478954567490824 24.545588337142462 29 24.551302029226402 25.532455502458618 25.378315672830524 24.537926795484452 30 24.526888981231387 25.66949754138098 25.214393309785997 24.58922016760163 31 24.796125077913985 24.941564512777894 25.581541311725186 24.680769097582935 32 24.390929080961286 25.49890920423852 25.297111988364847 24.81304972643535 33 24.461441235542626 25.201321074866676 25.559508968765147 24.777728720825543 34 24.83144608352379 25.071637578779693 25.622532723872844 24.474383613823672 35 24.912866195719925 25.559898538679963 25.340224392270933 24.18701087332918 36 24.668605859131517 25.422207216566246 25.489126670822078 24.42006025348016 37 24.869580649629476 25.26304626359166 25.39008934136713 24.477283745411732 38 24.486416995636816 25.176128887042037 25.829437634185194 24.508016483135954 39 24.65609633631138 25.278152919177227 25.56565551630999 24.5000952282014 40 24.694793614516243 24.994459450100422 25.979335480296417 24.33141145508692 41 24.607400096959623 24.904252372047925 25.933972227993628 24.554375302998825 42 24.55606343929635 24.993204169263798 25.66737654962255 24.7833558418173 43 24.54913775192188 24.586363321559666 25.91743714938708 24.94706177713138 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 107.0 1 133.5 2 160.0 3 192.0 4 224.0 5 224.0 6 372.0 7 520.0 8 571.5 9 623.0 10 919.5 11 1216.0 12 1216.0 13 2791.5 14 4367.0 15 7015.5 16 9664.0 17 8951.0 18 8238.0 19 8238.0 20 10532.5 21 12827.0 22 12831.0 23 12835.0 24 16253.0 25 19671.0 26 19671.0 27 24855.0 28 30039.0 29 35336.0 30 40633.0 31 48235.5 32 55838.0 33 55838.0 34 64342.5 35 72847.0 36 81849.5 37 90852.0 38 102228.0 39 113604.0 40 113604.0 41 123935.0 42 134266.0 43 145128.5 44 155991.0 45 165244.5 46 174498.0 47 174498.0 48 183626.5 49 192755.0 50 197009.5 51 201264.0 52 197936.5 53 194609.0 54 194609.0 55 188339.0 56 182069.0 57 171863.0 58 161657.0 59 148279.0 60 134901.0 61 134901.0 62 118993.0 63 103085.0 64 87864.5 65 72644.0 66 60294.0 67 47944.0 68 47944.0 69 39679.0 70 31414.0 71 25403.0 72 19392.0 73 15482.5 74 11573.0 75 11573.0 76 9312.0 77 7051.0 78 5681.0 79 4311.0 80 3445.0 81 2579.0 82 2579.0 83 2108.0 84 1637.0 85 1271.5 86 906.0 87 838.0 88 770.0 89 770.0 90 577.0 91 384.0 92 260.5 93 137.0 94 122.5 95 108.0 96 108.0 97 63.0 98 18.0 99 15.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2310240.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.17551246840702 #Duplication Level Percentage of deduplicated Percentage of total 1 82.81987893788352 50.665485365964535 2 9.465990399298294 11.581736273961878 3 2.9368576609373704 5.389913173638324 4 1.3754430097809738 3.36573723977757 5 0.8191125301074335 2.505481439930786 6 0.5068778582462243 1.8605107642260803 7 0.35666562187568696 1.5273441538675765 8 0.2576833088070387 1.26111267766603 9 0.19791087176188898 1.089656910279247 >10 1.14943633863696 12.88920217479167 >50 0.07799685263328147 3.2906929541555474 >100 0.03466351873051812 3.4462743017925006 >500 0.0010593509291708465 0.41921058531607364 >1k 4.237403716678641E-4 0.7076419846321574 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4920 0.2129648867650114 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4367 0.18902797977699287 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2976 0.12881778516517764 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.3285546090449475E-5 1.2985663827134842E-4 2 1.2985663827134842E-4 0.0 0.0 1.731421843617979E-4 1.2985663827134842E-4 3 3.0299882263314635E-4 0.0 0.0 2.1642773045224737E-4 1.2985663827134842E-4 4 3.895699148140453E-4 0.0 0.0 2.1642773045224737E-4 1.2985663827134842E-4 5 0.001168709744442136 0.0 0.0 3.462843687235958E-4 1.2985663827134842E-4 6 0.0012552808366230348 0.0 0.0 6.492831913567421E-4 1.2985663827134842E-4 7 0.0013851374748943832 0.0 0.0 6.492831913567421E-4 1.2985663827134842E-4 8 0.0017747073897084287 0.0 0.0 7.791398296280906E-4 1.2985663827134842E-4 9 0.001817992935798878 0.0 0.0 7.791398296280906E-4 2.1642773045224737E-4 10 0.0032031304106932613 0.0 0.0 0.0010821386522612368 2.1642773045224737E-4 11 0.003462843687235958 0.0 0.0 0.0011254241983516865 2.1642773045224737E-4 12 0.0035927003255073068 0.0 0.0 0.0012985663827134843 2.1642773045224737E-4 13 0.003938984694230902 0.0 0.0 0.0016015652053466306 2.1642773045224737E-4 14 0.004285269062954498 0.0 0.0 0.001817992935798878 2.1642773045224737E-4 15 0.004674838977768544 0.0 0.0 0.001904564027979777 2.1642773045224737E-4 16 0.005021123346492139 0.0 0.0 0.001991135120160676 2.5971327654269685E-4 17 0.005107694438673038 0.0 0.0 0.0020344206662511253 2.5971327654269685E-4 18 0.005150979984763488 0.0 0.0 0.0021642773045224737 2.5971327654269685E-4 19 0.005540549899577533 0.0 0.0 0.0023807050349747214 2.5971327654269685E-4 20 0.006925687374471916 0.0 0.0 0.002813560495879216 2.5971327654269685E-4 21 0.009652676778170234 0.0 0.0 0.003982270240321352 3.0299882263314635E-4 22 0.009825818962532032 0.0 0.0 0.004068841332502251 3.0299882263314635E-4 23 0.00999896114689383 0.0 0.0 0.004415125701225846 3.0299882263314635E-4 24 0.010301959969526975 0.0 0.0 0.004674838977768544 3.0299882263314635E-4 25 0.01073481543043147 0.0 0.0 0.004847981162130342 3.0299882263314635E-4 26 0.011903525174873607 0.0 0.0 0.0057136920839393306 3.0299882263314635E-4 27 0.012076667359235405 0.0 0.0 0.00744511392755731 3.462843687235958E-4 28 0.012596093912320798 0.0 0.0 0.01164381189833091 3.462843687235958E-4 29 0.012639379458411247 0.0 0.0 0.01908892582588822 3.462843687235958E-4 30 0.012942378281044394 0.0 0.0 0.0289580303345107 3.462843687235958E-4 31 0.013375233741948888 0.0 0.0 0.044281113650529814 3.462843687235958E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2120 0.0 22.426888 1 TAAGGCG 465 0.0 16.311827 29 GCGAATC 425 0.0 16.105883 33 GGCGAAT 425 0.0 16.105883 32 TATACAC 610 0.0 15.467213 3 GGGTATA 530 0.0 15.009434 1 CGAATCT 470 0.0 14.957446 34 GTATCAA 3280 0.0 14.382621 2 GAGACTA 530 0.0 13.962264 24 ATCTCCG 575 0.0 13.834783 10 CTTATAC 620 0.0 13.725806 1 AATCTCG 475 0.0 13.631578 36 CGAGACT 560 0.0 13.544642 23 ACGAGAC 565 0.0 13.424778 22 AGGCGAA 545 0.0 13.238532 31 TACACAT 785 0.0 13.197453 5 ATACCGA 85 0.009408487 13.058824 6 CACGAGA 585 0.0 12.965813 21 GCCCACG 645 0.0 12.906977 18 CGAGCCC 625 0.0 12.728001 15 >>END_MODULE