##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727575.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9317332 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30656672961745 33.0 31.0 34.0 31.0 34.0 2 32.539948345728156 34.0 31.0 34.0 31.0 34.0 3 32.61601218031085 34.0 31.0 34.0 31.0 34.0 4 36.14315578751514 37.0 35.0 37.0 35.0 37.0 5 36.04460128714958 37.0 35.0 37.0 35.0 37.0 6 36.03797889782182 37.0 35.0 37.0 35.0 37.0 7 35.97422137581874 37.0 35.0 37.0 35.0 37.0 8 35.963781048051096 37.0 35.0 37.0 35.0 37.0 9 37.64777685285873 39.0 37.0 39.0 35.0 39.0 10 37.595269439792425 39.0 37.0 39.0 35.0 39.0 11 37.61669424251492 39.0 37.0 39.0 35.0 39.0 12 37.494389702975056 39.0 37.0 39.0 35.0 39.0 13 37.48264835899376 39.0 37.0 39.0 35.0 39.0 14 38.763403622410365 40.0 38.0 41.0 35.0 41.0 15 38.736338149161156 40.0 38.0 41.0 34.0 41.0 16 38.6615676032581 40.0 38.0 41.0 34.0 41.0 17 38.57967302227719 40.0 38.0 41.0 34.0 41.0 18 38.47298711691287 40.0 38.0 41.0 34.0 41.0 19 38.43087634958162 40.0 38.0 41.0 34.0 41.0 20 38.30901270878831 40.0 38.0 41.0 33.0 41.0 21 38.20780959613761 40.0 38.0 41.0 33.0 41.0 22 38.094162577871 40.0 38.0 41.0 33.0 41.0 23 38.268000861190735 40.0 38.0 41.0 33.0 41.0 24 38.25159187200799 40.0 38.0 41.0 33.0 41.0 25 38.23904021022327 40.0 38.0 41.0 33.0 41.0 26 38.10665113146124 40.0 38.0 41.0 33.0 41.0 27 38.15312065728687 40.0 38.0 41.0 33.0 41.0 28 38.03975365480161 40.0 38.0 41.0 33.0 41.0 29 38.016861157249735 40.0 38.0 41.0 33.0 41.0 30 37.956149356918914 40.0 38.0 41.0 33.0 41.0 31 37.86843154242008 40.0 37.0 41.0 33.0 41.0 32 37.76030434463428 40.0 37.0 41.0 32.0 41.0 33 37.66275238448088 40.0 37.0 41.0 32.0 41.0 34 37.57058136384965 40.0 37.0 41.0 32.0 41.0 35 37.459060920014444 40.0 37.0 41.0 31.0 41.0 36 37.36407503778979 40.0 37.0 41.0 31.0 41.0 37 37.26855016006728 40.0 37.0 41.0 31.0 41.0 38 37.14089108341315 40.0 36.0 41.0 31.0 41.0 39 37.02665237215975 40.0 36.0 41.0 30.0 41.0 40 36.91552624721326 40.0 36.0 41.0 30.0 41.0 41 36.796392465139164 40.0 36.0 41.0 30.0 41.0 42 36.67393884858885 39.0 35.0 41.0 30.0 41.0 43 36.54131408003922 39.0 35.0 41.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 11.0 13 16.0 14 33.0 15 58.0 16 139.0 17 322.0 18 612.0 19 1292.0 20 2530.0 21 4866.0 22 8444.0 23 13582.0 24 21178.0 25 31202.0 26 44121.0 27 61585.0 28 83721.0 29 111831.0 30 145432.0 31 187093.0 32 238207.0 33 302774.0 34 394810.0 35 516719.0 36 705742.0 37 1052645.0 38 1842578.0 39 3545787.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.273653874306504 17.749029443192534 11.757239089473252 27.220077593027703 2 20.366066165722117 20.467135871084125 32.71944157404717 26.44735638914659 3 20.45038214802263 21.465286414608816 29.234377394730593 28.849954042637954 4 15.96679178116654 15.11230897428577 32.276653874735814 36.64424536981187 5 16.004055667437846 34.829412539984624 33.08639211310705 16.080139679470477 6 36.87354920915129 33.311123828151665 14.078590308899585 15.736736653797461 7 30.783554777268858 29.247299548840804 19.652385468286415 20.316760205603924 8 28.153273920044924 32.90806853292337 18.555086370218426 20.383571176813277 9 27.225508332213554 13.876590423095367 18.236314859232237 40.66158638545884 10 17.674780720489515 26.284251757906663 31.77892555508379 24.26204196652003 11 37.18502249356361 20.979009871066097 20.073257022503867 21.762710612866428 12 22.497835217205957 24.33575405491615 28.242795255122388 24.923615472755507 13 31.851972216939355 19.22107101045664 22.760871889077258 26.166084883526743 14 23.209873813662536 19.995037205929766 23.859287186503604 32.93580179390409 15 26.278531236195086 26.893460488474595 21.12254881547636 25.70545945985396 16 25.851520585506666 25.21707930982818 23.146508034703498 25.784892069961657 17 25.25303380839064 25.196912592574783 24.08385791125614 25.46619568777843 18 25.5514024830284 24.441599805609588 24.67693541455859 25.33006229680342 19 26.394669632894914 24.211394420634576 24.676087532353684 24.71784841411683 20 25.968979102601473 24.11989827130771 24.756325093921735 25.15479753216908 21 25.77529704855424 24.224874674423965 24.729139199934057 25.27068907708773 22 26.024585149482704 24.110131526922085 24.195102203077017 25.670181120518194 23 25.720227635979914 24.14977806951604 24.294680065065837 25.83531422943821 24 25.509695264695946 24.311970422434236 24.40298360088489 25.775350711984935 25 25.864228085894116 23.98522452564747 24.375228874531892 25.77531851392652 26 25.504071337159605 24.38756073090451 24.534823917404683 25.573544014531198 27 25.966993555665933 24.359612816201032 24.416764369886142 25.25662925824689 28 25.565430103810833 24.43240189358928 24.417504925229668 25.584663077370216 29 25.499155766908384 24.619987781910098 24.50827125189915 25.372585199282373 30 25.708507542717165 24.462152899563954 24.39395741184279 25.435382145876094 31 25.867082980406835 23.946479528689114 24.458246201809704 25.728191289094344 32 25.409752491378434 24.373747763844843 24.36409907900674 25.852400665769988 33 25.392537262813004 24.074466810885347 24.583936689172393 25.94905923712926 34 25.906128492577057 24.107341028526193 24.640186697221907 25.34634378167484 35 25.758586256237297 24.499889024025332 24.39842220927622 25.34310251046115 36 25.48812256555847 24.32507503220879 24.61295787248968 25.573844529743063 37 25.76513319478151 24.235993737262984 24.45993123353338 25.53894183442213 38 25.464639448288416 24.292683785444158 24.731500390884428 25.511176375382995 39 25.361047561683968 24.482663062773764 24.696050328570454 25.460239046971818 40 25.80023981113907 24.10693318645295 24.80065108767188 25.29217591473611 41 25.412822039613914 24.274567011243136 24.79706637050177 25.51554457864118 42 25.408893876487387 24.172660156362358 24.652153642265834 25.76629232488442 43 25.566063332292977 23.864471073908284 24.605369863390077 25.96409573040866 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 199.0 1 413.5 2 628.0 3 1247.0 4 1866.0 5 1866.0 6 2452.5 7 3039.0 8 2750.5 9 2462.0 10 3565.0 11 4668.0 12 4668.0 13 10743.5 14 16819.0 15 24867.0 16 32915.0 17 30118.5 18 27322.0 19 27322.0 20 34899.0 21 42476.0 22 39101.0 23 35726.0 24 44816.5 25 53907.0 26 53907.0 27 69023.5 28 84140.0 29 101378.5 30 118617.0 31 142369.0 32 166121.0 33 166121.0 34 195530.5 35 224940.0 36 260918.0 37 296896.0 38 339927.0 39 382958.0 40 382958.0 41 426996.5 42 471035.0 43 519387.0 44 567739.0 45 610892.0 46 654045.0 47 654045.0 48 703153.0 49 752261.0 50 782507.5 51 812754.0 52 820178.5 53 827603.0 54 827603.0 55 804854.0 56 782105.0 57 737360.0 58 692615.0 59 641965.5 60 591316.0 61 591316.0 62 531674.5 63 472033.0 64 409181.0 65 346329.0 66 300852.0 67 255375.0 68 255375.0 69 221250.5 70 187126.0 71 164267.5 72 141409.0 73 118316.0 74 95223.0 75 95223.0 76 80526.0 77 65829.0 78 54901.5 79 43974.0 80 35115.5 81 26257.0 82 26257.0 83 20726.5 84 15196.0 85 12968.0 86 10740.0 87 8288.5 88 5837.0 89 5837.0 90 4307.5 91 2778.0 92 2012.5 93 1247.0 94 920.5 95 594.0 96 594.0 97 370.0 98 146.0 99 106.5 100 67.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9317332.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.48140819251888 #Duplication Level Percentage of deduplicated Percentage of total 1 74.94182127117793 34.83401385196415 2 12.431028912347667 11.556234582556717 3 4.579869508204405 6.386363522379589 4 2.207311179609491 4.1039572778935645 5 1.331314205547396 3.094067951027374 6 0.8571144189035929 2.390393110365091 7 0.5856684173599126 1.9055884940940828 8 0.4320651958119173 1.6066398985851462 9 0.35360636029334586 1.4792509415039319 >10 2.019451198691399 17.52045614873062 >50 0.16901911645575385 5.37435632839534 >100 0.08685320314828086 7.330056976982627 >500 0.0038374299281051603 1.2019243789189715 >1k 9.471752602186448E-4 0.616396644674341 >5k 2.3101815174868286E-5 0.07917163536040187 >10k+ 6.930544552460485E-5 0.5211282565679727 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18275 0.19613983917284475 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18026 0.19346740032447057 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12230 0.1312607514683388 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.293074455219584E-5 0.0 0.0 2.146537227609792E-5 3.2198058414146884E-5 2 1.8245566434683233E-4 0.0 0.0 4.293074455219584E-5 3.2198058414146884E-5 3 2.0392103662293025E-4 0.0 0.0 6.439611682829377E-5 3.2198058414146884E-5 4 2.253864088990282E-4 0.0 0.0 6.439611682829377E-5 3.2198058414146884E-5 5 0.001073268613804896 0.0 0.0 1.0732686138048961E-4 3.2198058414146884E-5 6 0.0015562394900170992 0.0 0.0 1.3952491979463648E-4 5.3663430690244805E-5 7 0.0017494278405019805 0.0 0.0 1.5025760593268545E-4 7.512880296634273E-5 8 0.0022216660305761347 0.0 0.0 2.253864088990282E-4 9.659417524244065E-5 9 0.002457785125613212 0.0 0.0 2.575844673131751E-4 1.3952491979463648E-4 10 0.003777905520593234 0.0 0.0 3.756440148317136E-4 1.3952491979463648E-4 11 0.004003291929492263 0.0 0.0 4.185747593839095E-4 1.3952491979463648E-4 12 0.004260876396805438 0.0 0.0 4.185747593839095E-4 1.5025760593268545E-4 13 0.004604322353223004 0.0 0.0 4.615055039361053E-4 1.7172297820878336E-4 14 0.005280481579920089 0.0 0.0 5.47366993040497E-4 2.68317153451224E-4 15 0.005699056339303998 0.0 0.0 5.580996791785459E-4 2.7904983958927296E-4 16 0.00608543304027376 0.0 0.0 5.902977375926928E-4 3.005152118653709E-4 17 0.0062034925877923 0.0 0.0 5.902977375926928E-4 3.005152118653709E-4 18 0.006289354076896691 0.0 0.0 6.117631098687908E-4 3.6491132869366467E-4 19 0.006654265405590356 0.0 0.0 6.439611682829377E-4 3.756440148317136E-4 20 0.008618346968853316 0.0 0.0 8.2641683262977E-4 3.756440148317136E-4 21 0.01322266932207632 0.0 0.0 0.0013093877088419731 3.9710938710781155E-4 22 0.013566115278493886 0.0 0.0 0.001363051139532218 3.9710938710781155E-4 23 0.013931026607187551 0.0 0.0 0.001416714570222463 4.937035623502522E-4 24 0.014596453147746586 0.0 0.0 0.0015240414316029524 4.937035623502522E-4 25 0.014929166418026104 0.0 0.0 0.001631368292983442 5.044362484883011E-4 26 0.01715083244860224 0.0 0.0 0.001899685446434666 5.25901620764399E-4 27 0.01775186287233298 0.0 0.0 0.002769033023616632 5.25901620764399E-4 28 0.0185890123911008 0.0 0.0 0.0049585009957786195 5.47366993040497E-4 29 0.018760735369309584 0.0 0.0 0.009112050531203567 5.580996791785459E-4 30 0.019147112070279346 0.0 0.0 0.01486477030119781 5.688323653165949E-4 31 0.01985546935539058 0.0 0.0 0.029997857755846846 5.688323653165949E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11435 0.0 15.029734 1 TAATCCC 3325 0.0 13.409022 5 TTAATCC 3545 0.0 12.472497 4 TTTAATC 3870 0.0 11.903101 3 CGTATAC 205 2.8177055E-7 11.731707 3 CCTTTAA 4495 0.0 11.441601 1 GTATCAA 15590 0.0 11.00032 2 TAATACC 925 0.0 10.8 4 CTTTAAT 4790 0.0 10.427975 2 GGCGGGT 835 0.0 10.413174 33 TATACTG 1030 0.0 10.2378645 5 CGCAATC 455 0.0 10.164835 22 GCACTCG 2320 0.0 10.047415 13 GTATAGA 985 0.0 9.954315 1 GGGTAAG 3050 0.0 9.886886 1 GCGGGTT 950 0.0 9.736842 34 TCTACAC 1980 0.0 9.717172 3 CTAACAC 1260 0.0 9.690475 3 GTATTAG 1070 0.0 9.682242 1 GTCTTAC 920 0.0 9.652174 1 >>END_MODULE