##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727572.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1966479 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.6934495613734 34.0 31.0 34.0 31.0 34.0 2 32.8689296961727 34.0 31.0 34.0 31.0 34.0 3 32.96036062424262 34.0 31.0 34.0 31.0 34.0 4 36.38608345169209 37.0 37.0 37.0 35.0 37.0 5 36.253021771399546 37.0 37.0 37.0 35.0 37.0 6 36.26964895124738 37.0 37.0 37.0 35.0 37.0 7 36.246893050980965 37.0 36.0 37.0 35.0 37.0 8 36.233683654897916 37.0 36.0 37.0 35.0 37.0 9 37.9655404405539 39.0 38.0 39.0 35.0 39.0 10 37.94465641382389 39.0 38.0 39.0 35.0 39.0 11 38.01831089983671 39.0 38.0 39.0 35.0 39.0 12 37.99211433226594 39.0 38.0 39.0 35.0 39.0 13 38.02534377432965 39.0 38.0 39.0 35.0 39.0 14 39.405897037293556 40.0 39.0 41.0 37.0 41.0 15 39.43056905260621 40.0 39.0 41.0 37.0 41.0 16 39.41812040708291 40.0 39.0 41.0 37.0 41.0 17 39.42718279727371 40.0 39.0 41.0 37.0 41.0 18 39.404483851594655 40.0 39.0 41.0 37.0 41.0 19 39.43871813530681 40.0 39.0 41.0 37.0 41.0 20 39.41042238437329 40.0 39.0 41.0 37.0 41.0 21 39.394199988914195 40.0 39.0 41.0 37.0 41.0 22 39.36369317953561 40.0 39.0 41.0 37.0 41.0 23 39.32768465872252 40.0 39.0 41.0 36.0 41.0 24 39.293096442931756 40.0 39.0 41.0 36.0 41.0 25 39.229528004112936 40.0 39.0 41.0 36.0 41.0 26 39.14491840492576 40.0 39.0 41.0 36.0 41.0 27 39.10369243709188 40.0 39.0 41.0 36.0 41.0 28 39.03768207033993 40.0 39.0 41.0 36.0 41.0 29 38.96335429974081 40.0 39.0 41.0 35.0 41.0 30 38.909965984889745 40.0 38.0 41.0 35.0 41.0 31 38.85193892230733 40.0 38.0 41.0 35.0 41.0 32 38.76881065091465 40.0 38.0 41.0 35.0 41.0 33 38.7318283083623 40.0 38.0 41.0 35.0 41.0 34 38.69301324855236 40.0 38.0 41.0 35.0 41.0 35 38.681180424504916 40.0 38.0 41.0 35.0 41.0 36 38.625834804236405 40.0 38.0 41.0 35.0 41.0 37 38.612166211792754 40.0 38.0 41.0 35.0 41.0 38 38.57417902759195 40.0 38.0 41.0 35.0 41.0 39 38.53407537024296 40.0 38.0 41.0 35.0 41.0 40 38.48204379502654 40.0 38.0 41.0 35.0 41.0 41 38.43781804941726 40.0 38.0 41.0 34.0 41.0 42 38.405995182252134 40.0 38.0 41.0 34.0 41.0 43 37.31834868310315 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 1.0 15 0.0 16 2.0 17 11.0 18 18.0 19 30.0 20 57.0 21 145.0 22 326.0 23 565.0 24 1000.0 25 1714.0 26 2759.0 27 4028.0 28 6050.0 29 8499.0 30 12387.0 31 17278.0 32 24038.0 33 33524.0 34 49698.0 35 73284.0 36 115923.0 37 202002.0 38 492161.0 39 920976.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26901024623197 16.634197466639613 12.014417646972076 28.08237464015634 2 18.34842884159963 19.174473767581553 35.65977567011903 26.817321720699788 3 19.890779408272348 20.96859412177806 29.188666647342785 29.9519598226068 4 15.35292266024707 14.25354656724023 32.991148138373205 37.4023826341395 5 16.229260520961578 35.07883887903201 33.15051927836504 15.54138132164137 6 37.51435942107696 32.60411120586591 14.636311905695406 15.245217467361716 7 31.15456610520631 29.642218401518655 19.978194529410178 19.225020963864857 8 28.099766130225646 34.72226248030108 18.759976587596412 18.41799480187686 9 28.846176338521794 13.95585714365625 17.198861518480495 39.99910499934146 10 16.950041164945063 26.061452982716826 32.23141462481928 24.757091227518828 11 38.313554327302754 20.48656507392146 20.00733290312279 21.19254769565299 12 22.697826928230608 22.98956663152772 29.210329731464206 25.102276708777467 13 32.23665241276413 18.499155088866956 22.856486135880424 26.407706362488486 14 23.593132700628892 18.614284719033357 23.95138722559458 33.84119535474318 15 26.927976347573505 25.804394554938035 20.98329043940973 26.284338658078727 16 25.93055913640573 24.81719865810924 23.157531811933918 26.09471039355111 17 25.70421550395402 24.352103429530647 23.738417750710788 26.205263315804544 18 25.72262404022621 24.73212274323804 24.1457447549656 25.399508461570147 19 27.122588138495253 24.037022515877364 23.928910504510853 24.911478841116534 20 26.041925695621465 23.623440677474818 24.004426185074948 26.330207441828772 21 25.78669795100787 24.30384458720383 24.624773516523696 25.284683945264607 22 26.663137516342662 23.378993622611784 23.405335119266464 26.55253374177909 23 25.797173526897566 23.869718415503037 24.215870090654413 26.117237966944984 24 25.47304090203862 23.412759556547513 24.370715375043414 26.74348416637045 25 26.281948599501952 23.21387617157366 23.856751076416273 26.647424152508115 26 25.806784613514814 23.582809681669623 24.363290937762365 26.24711476705319 27 26.455100715542855 24.06636429883055 23.65578274672651 25.822752238900087 28 25.863332382395132 24.787144942814034 22.946596429455894 26.402926245334935 29 25.865468179421192 24.629604485987393 24.058889009239355 25.44603832535206 30 27.044428137803656 23.77747232490151 23.240980452880503 25.937119084414327 31 26.05235041920102 23.828731453526835 24.139235659267147 25.979682468005 32 25.633683349784054 24.069466289749343 23.959981266008942 26.33686909445766 33 25.577237285524024 23.477494547361044 24.14442259490185 26.800845572213078 34 26.11037290507552 23.646425921659983 24.83377651121624 25.40942466204826 35 25.97119013221092 23.49875081300131 24.26824797010291 26.26181108468486 36 25.68641719540356 23.19531507837104 24.886154390664736 26.232113335560665 37 25.070544867247502 23.122138604073577 25.31056777112799 26.496748757550932 38 25.776578341289174 22.500774226421946 25.10237841339775 26.620269018891126 39 24.662811044511535 22.93668022897778 26.174345111236885 26.226163615273794 40 25.860382948406773 22.071224762634127 26.171395677248523 25.896996611710577 41 24.673490029641812 22.648398482770475 26.376076225578814 26.3020352620089 42 24.348442063200267 22.74100053954301 26.70270061363483 26.207856783621896 43 23.832494524477504 22.230341641075242 26.46186407279203 27.47529976165522 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 34.5 2 40.0 3 97.5 4 155.0 5 155.0 6 196.5 7 238.0 8 220.5 9 203.0 10 285.0 11 367.0 12 367.0 13 622.0 14 877.0 15 1229.5 16 1582.0 17 1683.0 18 1784.0 19 1784.0 20 2309.0 21 2834.0 22 3446.0 23 4058.0 24 5432.0 25 6806.0 26 6806.0 27 8710.0 28 10614.0 29 13406.0 30 16198.0 31 20637.0 32 25076.0 33 25076.0 34 30983.5 35 36891.0 36 44028.0 37 51165.0 38 60322.5 39 69480.0 40 69480.0 41 80025.0 42 90570.0 43 103310.0 44 116050.0 45 133205.5 46 150361.0 47 150361.0 48 165991.0 49 181621.0 50 193199.0 51 204777.0 52 205220.0 53 205663.0 54 205663.0 55 196283.5 56 186904.0 57 174803.0 58 162702.0 59 151893.0 60 141084.0 61 141084.0 62 123194.0 63 105304.0 64 88896.5 65 72489.0 66 60269.0 67 48049.0 68 48049.0 69 39092.0 70 30135.0 71 23979.0 72 17823.0 73 14252.0 74 10681.0 75 10681.0 76 8552.0 77 6423.0 78 5124.5 79 3826.0 80 2915.5 81 2005.0 82 2005.0 83 1458.0 84 911.0 85 690.5 86 470.0 87 320.5 88 171.0 89 171.0 90 107.5 91 44.0 92 28.0 93 12.0 94 8.5 95 5.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1966479.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.20988873327082 #Duplication Level Percentage of deduplicated Percentage of total 1 82.4559990709852 52.944905257386395 2 9.409354954061538 12.083472693042834 3 3.082147853399817 5.937131121788752 4 1.5399155758171745 3.955112311274057 5 0.848535256800471 2.724217721270781 6 0.5968739727254588 2.2995126825892216 7 0.40840867307265666 1.835671281898864 8 0.3023528683731523 1.5531235229140306 9 0.21922796850583323 1.2668943118482494 >10 1.0834422754066173 11.693960626933407 >50 0.037480752322011986 1.58002459541487 >100 0.015468053475420665 1.7651381906380146 >500 7.134525492284499E-4 0.30270698360892523 >1k 7.927250546982552E-5 0.058128699391522626 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.0852310144171386E-5 2 0.0 0.0 0.0 0.0 5.0852310144171386E-5 3 0.0 0.0 0.0 0.0 5.0852310144171386E-5 4 0.0 0.0 0.0 0.0 5.0852310144171386E-5 5 0.0 5.0852310144171386E-5 0.0 0.0 5.0852310144171386E-5 6 0.0 5.0852310144171386E-5 0.0 0.0 1.5255693043251416E-4 7 0.0 5.0852310144171386E-5 0.0 0.0 1.5255693043251416E-4 8 0.0 5.0852310144171386E-5 0.0 0.0 2.0340924057668554E-4 9 0.0 5.0852310144171386E-5 0.0 0.0 2.0340924057668554E-4 10 0.0 5.0852310144171386E-5 0.0 0.0 2.0340924057668554E-4 11 0.0 5.0852310144171386E-5 0.0 0.0 2.0340924057668554E-4 12 0.0 5.0852310144171386E-5 0.0 0.0 2.0340924057668554E-4 13 0.0 5.0852310144171386E-5 0.0 0.0 2.0340924057668554E-4 14 0.0 5.0852310144171386E-5 0.0 0.0 3.0511386086502833E-4 15 0.0 5.0852310144171386E-5 0.0 5.0852310144171386E-5 4.068184811533711E-4 16 0.0 5.0852310144171386E-5 0.0 1.0170462028834277E-4 6.61080031874228E-4 17 0.0 5.0852310144171386E-5 0.0 2.0340924057668554E-4 6.61080031874228E-4 18 0.0 5.0852310144171386E-5 0.0 2.542615507208569E-4 6.61080031874228E-4 19 0.0 5.0852310144171386E-5 0.0 3.0511386086502833E-4 6.61080031874228E-4 20 0.0 5.0852310144171386E-5 0.0 4.5767079129754244E-4 6.61080031874228E-4 21 0.0 5.0852310144171386E-5 0.0 7.119323420183994E-4 7.119323420183994E-4 22 0.0 5.0852310144171386E-5 0.0 0.0012204554434601133 7.119323420183994E-4 23 0.0 5.0852310144171386E-5 0.0 0.0015255693043251415 8.136369623067422E-4 24 0.0 5.0852310144171386E-5 0.0 0.0020340924057668554 8.136369623067422E-4 25 0.0 5.0852310144171386E-5 0.0 0.0025934678173527405 8.136369623067422E-4 26 0.0 5.0852310144171386E-5 0.0 0.003966480191245368 8.136369623067422E-4 27 0.0 5.0852310144171386E-5 0.0 0.009356825066527534 8.644892724509136E-4 28 0.0 5.0852310144171386E-5 0.0 0.03788497105740768 8.644892724509136E-4 29 0.0 5.0852310144171386E-5 0.0 0.08283841322485519 8.644892724509136E-4 30 0.0 5.0852310144171386E-5 0.0 0.1476751086586737 8.644892724509136E-4 31 0.0 5.0852310144171386E-5 0.0 0.47958813696968033 9.153415825950849E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1170 0.0 20.081198 37 TACTTAC 485 0.0 17.927834 31 TCTTATA 2105 0.0 16.87411 37 TTAGAAC 220 1.8189894E-12 15.136364 3 TAACCGT 75 0.0041057863 14.8 6 GTACTTA 620 0.0 14.620968 30 TTTATAC 165 1.646913E-8 14.575757 3 GTACCGT 140 6.0005914E-7 14.535714 6 GTGTAAG 280 0.0 14.535714 1 GTGTAGG 320 0.0 14.453125 1 ACTTACA 500 0.0 14.429999 32 TATACTG 220 1.8189894E-11 14.295454 5 GTACTAG 80 0.006300721 13.875 1 TAGACAG 270 0.0 13.703704 5 TTATACT 235 5.638867E-11 13.382979 4 GGTATCA 1340 0.0 13.115672 1 ATAGCGT 85 0.009407837 13.058824 6 TAAGACT 255 1.6370905E-11 13.058824 4 ATAATAG 200 1.4639227E-8 12.950001 3 TTAGACA 300 0.0 12.95 4 >>END_MODULE