##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727571.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1538251 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.65032039634624 34.0 31.0 34.0 31.0 34.0 2 32.82404627073215 34.0 31.0 34.0 31.0 34.0 3 32.917991277106275 34.0 31.0 34.0 31.0 34.0 4 36.35757688439663 37.0 37.0 37.0 35.0 37.0 5 36.218498151472026 37.0 35.0 37.0 35.0 37.0 6 36.23838112245661 37.0 36.0 37.0 35.0 37.0 7 36.21297759598401 37.0 36.0 37.0 35.0 37.0 8 36.202966225928016 37.0 36.0 37.0 35.0 37.0 9 37.934600400064745 39.0 38.0 39.0 35.0 39.0 10 37.90235078670516 39.0 38.0 39.0 35.0 39.0 11 37.983106138074994 39.0 38.0 39.0 35.0 39.0 12 37.956704074952654 39.0 38.0 39.0 35.0 39.0 13 37.99098911686064 39.0 38.0 39.0 35.0 39.0 14 39.351048040924404 40.0 39.0 41.0 37.0 41.0 15 39.37474638404266 40.0 39.0 41.0 37.0 41.0 16 39.3554114380553 40.0 39.0 41.0 36.0 41.0 17 39.37639761001293 40.0 39.0 41.0 37.0 41.0 18 39.34130645778875 40.0 39.0 41.0 36.0 41.0 19 39.388136266448065 40.0 39.0 41.0 37.0 41.0 20 39.35713872443444 40.0 39.0 41.0 37.0 41.0 21 39.34504186897977 40.0 39.0 41.0 36.0 41.0 22 39.31833881466679 40.0 39.0 41.0 36.0 41.0 23 39.28015258888179 40.0 39.0 41.0 36.0 41.0 24 39.240014145935874 40.0 39.0 41.0 36.0 41.0 25 39.18146843395519 40.0 39.0 41.0 36.0 41.0 26 39.09070756333004 40.0 39.0 41.0 36.0 41.0 27 39.05198176370436 40.0 39.0 41.0 36.0 41.0 28 38.96366002687468 40.0 38.0 41.0 36.0 41.0 29 38.89195716433794 40.0 38.0 41.0 35.0 41.0 30 38.850831236254685 40.0 38.0 41.0 35.0 41.0 31 38.78504483338545 40.0 38.0 41.0 35.0 41.0 32 38.69931630143585 40.0 38.0 41.0 35.0 41.0 33 38.660962352697965 40.0 38.0 41.0 35.0 41.0 34 38.62091037158435 40.0 38.0 41.0 35.0 41.0 35 38.622583700579426 40.0 38.0 41.0 35.0 41.0 36 38.54806400255875 40.0 38.0 41.0 35.0 41.0 37 38.55098420218807 40.0 38.0 41.0 35.0 41.0 38 38.52284575144108 40.0 38.0 41.0 35.0 41.0 39 38.47323941281364 40.0 38.0 41.0 35.0 41.0 40 38.4343068848972 40.0 38.0 41.0 34.0 41.0 41 38.37911498188527 40.0 38.0 41.0 34.0 41.0 42 38.35818796802342 40.0 38.0 41.0 34.0 41.0 43 37.27149665431714 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 1.0 13 0.0 14 2.0 15 2.0 16 1.0 17 9.0 18 16.0 19 36.0 20 69.0 21 119.0 22 236.0 23 461.0 24 781.0 25 1302.0 26 2011.0 27 3202.0 28 4631.0 29 6913.0 30 9742.0 31 13881.0 32 19325.0 33 27368.0 34 40275.0 35 60440.0 36 94301.0 37 165242.0 38 402911.0 39 684971.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.20276729870483 16.41357619790268 12.066821344500996 28.316835158891497 2 18.234930450232113 19.11528092619475 35.9385431896355 26.711245433937634 3 19.80372513978538 20.907576201803217 29.602451095432407 29.686247562978995 4 15.547202634680557 14.285444963143206 32.98128848932976 37.18606391284647 5 16.26633104740384 35.185870186335 33.13360433375308 15.414194432508088 6 37.51552900014367 32.44210470202847 14.760399960734627 15.28196633709323 7 30.98089973612889 30.081371635708347 19.89356743470344 19.044161193459324 8 28.029365818712293 35.16344211705372 18.81604497575493 17.99114708847906 9 29.521645037123328 13.816795828509132 16.94274861514798 39.71881051921955 10 16.83359867797908 26.272045329403326 32.233556162160795 24.6607998304568 11 38.481366174961046 20.486838623865676 19.874389810245532 21.157405390927746 12 22.642858675209702 22.89873369170571 29.150509247190477 25.307898385894113 13 32.25715439157849 18.52252980820425 22.783212882682996 26.437102917534265 14 23.470551945033677 18.67484565262756 24.027613178863525 33.82698922347524 15 27.246463678554413 25.78798908630646 20.95087212685056 26.01467510828857 16 25.713878944333533 25.05676901884023 23.426930975504 25.80242106132224 17 25.807231719660834 24.132992600037316 23.559354097608256 26.50042158269359 18 25.521972681961525 25.229562665650796 24.1532103668387 25.09525428554898 19 27.48394117735012 24.083065767550288 23.815294123000733 24.617698932098858 20 25.886477564454697 23.49525532569132 23.975411035000143 26.642856074853842 21 25.56474853583713 24.50952412837697 25.02159920585132 24.904128129934584 22 26.83073178564487 23.056900336811093 23.161239615641403 26.95112826190264 23 25.708613223719667 23.891679576350022 24.45394152189727 25.94576567803304 24 25.082642559634287 23.2781906203864 24.70416076440061 26.935006055578707 25 26.094896086529438 22.913620728996765 23.88400852656686 27.107474657906934 26 25.58821674746189 23.476012692336944 24.653063771777166 26.282706788423997 27 26.734453609976526 23.997709086488488 23.649521437008655 25.618315866526338 28 25.57235457672383 25.151942043268622 22.646889226790687 26.62881415321687 29 25.733121577687907 24.737315301599025 24.18194429907733 25.34761882163574 30 27.5299674760491 23.53244041447072 23.006713468738198 25.930878640741984 31 26.091580632809602 23.9135225655631 24.21314856938172 25.781748232245583 32 25.732796533205573 24.04224018056871 23.863530724179604 26.361432562046115 33 25.524182984441417 23.24490606539505 24.05543698655161 27.175473963611918 34 26.08611988550633 23.659662824857584 25.173785032481693 25.08043225715439 35 26.10887299926995 23.234049579684978 24.232326193839626 26.424751227205444 36 25.3599055030681 23.03421223194394 25.33617725585746 26.2697050091305 37 24.775475523825435 23.04643390447983 25.858523738973677 26.31956683272106 38 25.909620731597123 22.107705439489393 25.22826248772144 26.754411341192043 39 24.190070411135764 22.98135999911588 26.76864828951842 26.059921300229938 40 26.042238880390784 21.64367193650451 26.47539315755361 25.838696025551094 41 24.60944280224749 22.645589048861336 26.579797445280384 26.16517070361079 42 24.146124397123746 22.591111593621587 27.133023154218655 26.12974085503601 43 23.390656011275144 22.07786635601082 26.608661395311948 27.92281623740209 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 24.0 2 33.0 3 64.0 4 95.0 5 95.0 6 130.5 7 166.0 8 163.0 9 160.0 10 214.0 11 268.0 12 268.0 13 438.5 14 609.0 15 943.0 16 1277.0 17 1324.5 18 1372.0 19 1372.0 20 1665.5 21 1959.0 22 2464.0 23 2969.0 24 3962.5 25 4956.0 26 4956.0 27 6493.0 28 8030.0 29 9931.5 30 11833.0 31 15395.5 32 18958.0 33 18958.0 34 23681.0 35 28404.0 36 34028.0 37 39652.0 38 46790.5 39 53929.0 40 53929.0 41 61908.5 42 69888.0 43 80017.5 44 90147.0 45 104018.5 46 117890.0 47 117890.0 48 132376.0 49 146862.0 50 157667.5 51 168473.0 52 168445.0 53 168417.0 54 168417.0 55 157228.0 56 146039.0 57 135475.0 58 124911.0 59 116236.0 60 107561.0 61 107561.0 62 93769.0 63 79977.0 64 66776.0 65 53575.0 66 44339.5 67 35104.0 68 35104.0 69 28658.0 70 22212.0 71 17905.5 72 13599.0 73 11007.5 74 8416.0 75 8416.0 76 6671.0 77 4926.0 78 3911.5 79 2897.0 80 2214.5 81 1532.0 82 1532.0 83 1093.0 84 654.0 85 477.0 86 300.0 87 208.5 88 117.0 89 117.0 90 80.5 91 44.0 92 28.0 93 12.0 94 10.0 95 8.0 96 8.0 97 5.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1538251.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.93272449336735 #Duplication Level Percentage of deduplicated Percentage of total 1 84.66860313031233 57.51768889689768 2 8.565143660726322 11.637070891004662 3 2.6803032543228444 5.462409076037691 4 1.3074690614452231 3.552797421390397 5 0.7214117059074253 2.4503731331849634 6 0.4752896066993784 1.9372630743881878 7 0.339844666376179 1.6160601864031319 8 0.2267870833685847 1.2325011562505916 9 0.16936837752514777 1.0355089795474044 >10 0.7940620588999395 8.923967784957332 >50 0.030867461159560072 1.4304261928612734 >100 0.01951103208281502 2.555877374361698 >500 0.001147629577895743 0.4983045851552413 >1k 1.9127159631595716E-4 0.14975124755969116 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 6.500889646748157E-5 4 0.0 0.0 0.0 6.500889646748157E-5 6.500889646748157E-5 5 0.0 0.0 0.0 6.500889646748157E-5 6.500889646748157E-5 6 0.0 0.0 0.0 6.500889646748157E-5 6.500889646748157E-5 7 0.0 0.0 0.0 6.500889646748157E-5 6.500889646748157E-5 8 0.0 0.0 0.0 6.500889646748157E-5 6.500889646748157E-5 9 0.0 0.0 0.0 1.3001779293496314E-4 6.500889646748157E-5 10 0.0 0.0 0.0 1.9502668940244472E-4 6.500889646748157E-5 11 0.0 0.0 0.0 2.600355858699263E-4 6.500889646748157E-5 12 0.0 0.0 0.0 2.600355858699263E-4 6.500889646748157E-5 13 0.0 0.0 0.0 2.600355858699263E-4 6.500889646748157E-5 14 0.0 0.0 0.0 3.250444823374079E-4 1.3001779293496314E-4 15 0.0 0.0 0.0 3.9005337880488943E-4 1.3001779293496314E-4 16 0.0 0.0 0.0 5.200711717398526E-4 1.9502668940244472E-4 17 0.0 0.0 0.0 6.500889646748158E-4 1.9502668940244472E-4 18 0.0 0.0 0.0 6.500889646748158E-4 1.9502668940244472E-4 19 0.0 0.0 0.0 7.150978611422974E-4 1.9502668940244472E-4 20 0.0 0.0 0.0 7.150978611422974E-4 1.9502668940244472E-4 21 0.0 0.0 0.0 9.101245505447421E-4 2.600355858699263E-4 22 0.0 0.0 0.0 0.0011701601364146684 2.600355858699263E-4 23 0.0 0.0 0.0 0.0016252224116870394 3.250444823374079E-4 24 0.0 0.0 0.0 0.002145293583426892 3.250444823374079E-4 25 0.0 0.0 0.0 0.002600355858699263 3.250444823374079E-4 26 0.0 0.0 0.0 0.003965542684516376 3.250444823374079E-4 27 0.0 0.0 0.0 0.011311547985341794 3.250444823374079E-4 28 0.0 0.0 0.0 0.04466111187315984 3.250444823374079E-4 29 0.0 0.0 0.0 0.09855348704470207 3.250444823374079E-4 30 0.0 0.0 0.0 0.17558902935866774 3.250444823374079E-4 31 0.0 0.0 0.0 0.5688278440904638 3.250444823374079E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1155 0.0 20.341991 37 TACTTAC 570 0.0 18.82456 31 CGACTTA 150 2.5102054E-10 17.266666 19 TACCGTC 110 7.811832E-7 16.818182 7 GTATTAT 100 5.8803944E-6 16.65 1 ATACCGT 100 5.8803944E-6 16.65 6 GCTTATA 245 0.0 15.857142 1 GTATAAA 95 7.062161E-5 15.578946 1 GTACTTA 680 0.0 15.507353 30 GTTATAC 120 1.9364397E-6 15.416666 3 CTCGTTA 675 0.0 15.348147 22 AGTGTAC 760 0.0 15.335525 27 ACTTACA 490 0.0 15.10204 32 TCGTTAC 595 0.0 14.924369 23 GGTATCA 1250 0.0 14.8 1 GTACCGT 125 2.9601379E-6 14.799999 6 GTGTACT 755 0.0 14.701985 28 TCTTATA 1845 0.0 14.539295 37 ATCTCGT 765 0.0 14.509804 20 CGTTACG 485 0.0 14.494845 24 >>END_MODULE