##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727570.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1606569 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.189528118618 31.0 31.0 34.0 30.0 34.0 2 31.36787464466201 31.0 31.0 34.0 30.0 34.0 3 31.4653208172198 31.0 31.0 34.0 30.0 34.0 4 35.30561214613253 37.0 35.0 37.0 33.0 37.0 5 34.355025523335755 35.0 35.0 37.0 30.0 37.0 6 34.31000722658037 35.0 35.0 37.0 30.0 37.0 7 34.293708517965925 35.0 35.0 37.0 30.0 37.0 8 34.197688365703556 35.0 35.0 37.0 30.0 37.0 9 35.796943050687524 37.0 35.0 39.0 30.0 39.0 10 35.491262435662584 37.0 35.0 39.0 30.0 39.0 11 35.67308220188489 37.0 35.0 39.0 30.0 39.0 12 35.60146311798622 37.0 35.0 39.0 30.0 39.0 13 35.74277108546225 37.0 35.0 39.0 30.0 39.0 14 36.68372102287546 38.0 36.0 40.0 31.0 41.0 15 36.63626772332841 38.0 36.0 40.0 31.0 41.0 16 36.59636467528005 38.0 36.0 40.0 31.0 41.0 17 36.579225044177996 38.0 36.0 40.0 31.0 41.0 18 36.51932721221435 38.0 36.0 40.0 31.0 41.0 19 36.572811998737684 38.0 35.0 40.0 31.0 41.0 20 36.53887508099559 38.0 35.0 40.0 31.0 41.0 21 36.49056903251588 38.0 35.0 40.0 30.0 41.0 22 36.47257229536982 38.0 35.0 40.0 30.0 41.0 23 36.38691273141708 38.0 35.0 40.0 30.0 41.0 24 36.29532064915979 38.0 35.0 40.0 30.0 41.0 25 36.18683542381311 38.0 35.0 40.0 30.0 41.0 26 35.99179369202319 38.0 34.0 40.0 29.0 41.0 27 35.87961861582042 38.0 34.0 40.0 29.0 41.0 28 35.75409023826552 38.0 34.0 40.0 29.0 41.0 29 35.602747220941026 38.0 34.0 40.0 28.0 41.0 30 35.506572080004034 38.0 34.0 40.0 27.0 41.0 31 35.39599295143875 38.0 34.0 40.0 27.0 41.0 32 35.24721814002386 38.0 34.0 40.0 27.0 41.0 33 35.184082351894006 38.0 34.0 40.0 27.0 40.0 34 35.09129330890861 38.0 33.0 40.0 27.0 40.0 35 35.086059173306595 38.0 33.0 40.0 27.0 40.0 36 35.008424785988026 38.0 33.0 40.0 26.0 40.0 37 34.949785536755655 38.0 33.0 40.0 26.0 40.0 38 34.896750777588764 37.0 33.0 40.0 26.0 40.0 39 34.83117874177829 37.0 33.0 39.0 26.0 40.0 40 34.740300603335434 37.0 33.0 39.0 26.0 40.0 41 34.70621616625243 37.0 33.0 39.0 26.0 40.0 42 34.646442200739585 37.0 33.0 39.0 26.0 40.0 43 33.46659620595194 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 3.0 14 10.0 15 22.0 16 58.0 17 88.0 18 217.0 19 411.0 20 859.0 21 1433.0 22 2590.0 23 4107.0 24 6405.0 25 9770.0 26 14315.0 27 20045.0 28 28082.0 29 38313.0 30 51347.0 31 67117.0 32 88526.0 33 115410.0 34 151260.0 35 195261.0 36 240144.0 37 263648.0 38 228460.0 39 78664.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.19383045483885 17.980927056354258 12.376250257536402 27.44899223127049 2 19.274553411649297 20.248679017209966 34.236189046346595 26.240578524794145 3 20.655321993639863 21.840767498937176 28.846566814123765 28.657343693299197 4 16.16158409629465 15.097204041656473 32.912311889498675 35.8288999725502 5 16.24144372261633 34.96009197239584 33.18568950353206 15.612774801455773 6 37.19852679841327 33.21394848276047 14.506255255765549 15.081269463060721 7 30.956715833555858 29.321180727376166 20.165769412953942 19.556334026114037 8 27.916385788596692 34.39254709881742 18.766078518880917 18.92498859370497 9 28.138411733327356 14.01010476362982 17.481539852941268 40.369943650101554 10 16.98588731638666 26.132148697005857 32.51618822471988 24.3657757618876 11 38.24329985204495 20.48576811826943 20.084291430993627 21.186640598691994 12 22.619009827775837 23.443313047867846 29.186608231579225 24.75106889277709 13 32.13189100499263 18.746596006769707 22.933655510594317 26.18785747764335 14 23.556784675914948 18.799566031711056 24.0184517440583 33.6251975483157 15 26.637075656258773 26.10525909562552 20.92060782948009 26.337057418635613 16 26.009278157365166 24.761525959980553 23.14292134355885 26.086274539095427 17 25.61607998162544 24.63821970920639 23.874853803353606 25.870846505814566 18 25.745672921611213 24.549272393529318 24.257159200756394 25.44789548410308 19 26.8256140881593 24.169394529584476 24.08262576957479 24.922365612681435 20 26.12785383011872 23.875165025591805 24.029406766842882 25.967574377446596 21 25.801506191143986 24.343181027394404 24.452855744135483 25.402457037326126 22 26.43341182358181 23.700195883276724 23.73959661863263 26.126795674508845 23 25.935829709150372 23.928135050533157 24.109266393164564 26.02676884715191 24 25.75301776643269 23.81765115597276 24.147795706253515 26.281535371341036 25 26.259936548010078 23.504499339897635 23.88338129268024 26.35218281941205 26 25.93626542028385 23.832029623377522 24.155514017760833 26.076190938577803 27 26.327720751489665 24.171448596356583 23.771465775824133 25.72936487632962 28 26.05079520394082 24.43405792094831 23.41947342442186 26.095673450689016 29 25.969628444218706 24.46630054482565 24.0627075463301 25.50136346462555 30 26.580059742220847 24.176614885510674 23.515765584920413 25.72755978734807 31 26.130530341367226 23.878837448002542 24.080011502773925 25.910620707856307 32 25.60873513680396 24.194416797535617 23.997911076337214 26.198936989323208 33 25.70309771942568 23.825431711927717 24.07341359132412 26.398056977322483 34 26.108495806902788 23.783727932009143 24.672329666512923 25.435446594575144 35 26.005294512716233 23.748933285778577 24.277264157344007 25.968508044161194 36 25.86586695000339 23.53026854122045 24.5818884840925 26.021976024683656 37 25.313758699439614 23.257513371663464 25.145200735231416 26.283527193665506 38 25.66431942854617 22.951644155962178 24.989714105027545 26.3943223104641 39 24.95759597004548 23.258633771720977 25.726314898395273 26.057455359838265 40 25.733846476559673 22.567533669577838 25.87352301706307 25.825096836799418 41 24.901638211617428 22.89020888614183 26.03822182551761 26.16993107672313 42 24.501593146637337 22.964777734414145 26.311848417341555 26.221780701606967 43 24.255291867327205 22.558943935803565 26.16239949855873 27.0233646983105 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 27.5 2 35.0 3 70.5 4 106.0 5 106.0 6 148.5 7 191.0 8 200.0 9 209.0 10 290.5 11 372.0 12 372.0 13 577.0 14 782.0 15 1178.5 16 1575.0 17 1633.0 18 1691.0 19 1691.0 20 2184.5 21 2678.0 22 3104.0 23 3530.0 24 4783.5 25 6037.0 26 6037.0 27 8109.5 28 10182.0 29 12462.0 30 14742.0 31 18670.5 32 22599.0 33 22599.0 34 27768.0 35 32937.0 36 38784.0 37 44631.0 38 52751.0 39 60871.0 40 60871.0 41 69352.5 42 77834.0 43 87946.5 44 98059.0 45 109542.0 46 121025.0 47 121025.0 48 132841.5 49 144658.0 50 152038.0 51 159418.0 52 160636.0 53 161854.0 54 161854.0 55 155842.0 56 149830.0 57 140149.5 58 130469.0 59 121472.5 60 112476.0 61 112476.0 62 98898.0 63 85320.0 64 72328.5 65 59337.0 66 49484.5 67 39632.0 68 39632.0 69 32523.0 70 25414.0 71 20517.5 72 15621.0 73 12623.5 74 9626.0 75 9626.0 76 7790.0 77 5954.0 78 4697.5 79 3441.0 80 2700.0 81 1959.0 82 1959.0 83 1413.0 84 867.0 85 634.0 86 401.0 87 271.5 88 142.0 89 142.0 90 85.5 91 29.0 92 21.0 93 13.0 94 7.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1606569.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.03400278832858 #Duplication Level Percentage of deduplicated Percentage of total 1 85.44153638689309 60.69254333945642 2 8.034039096373464 11.413799111466668 3 2.621427862582013 5.586315423001588 4 1.2263633000306842 3.4845397629553387 5 0.7376240380892356 2.6198193989184473 6 0.4532411342862734 1.931731919800581 7 0.31517390888257335 1.567164502566119 8 0.23322220212273087 1.3253365244708957 9 0.16219264319154353 1.0369073401843036 >10 0.7505315853548594 8.573382816698322 >50 0.018503405471034143 0.873942110887275 >100 0.005793366981723382 0.7515613011929881 >500 3.5106974083207697E-4 0.14295644840108004 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.224444763965943E-5 2 0.0 0.0 0.0 0.0 6.224444763965943E-5 3 0.0 0.0 0.0 0.0 6.224444763965943E-5 4 0.0 0.0 0.0 6.224444763965943E-5 1.2448889527931885E-4 5 0.0 0.0 0.0 6.224444763965943E-5 1.2448889527931885E-4 6 0.0 0.0 0.0 6.224444763965943E-5 1.2448889527931885E-4 7 0.0 0.0 0.0 6.224444763965943E-5 1.2448889527931885E-4 8 0.0 0.0 0.0 6.224444763965943E-5 1.8673334291897828E-4 9 0.0 0.0 0.0 1.2448889527931885E-4 1.8673334291897828E-4 10 0.0 0.0 0.0 1.2448889527931885E-4 1.8673334291897828E-4 11 0.0 0.0 0.0 1.2448889527931885E-4 1.8673334291897828E-4 12 0.0 0.0 0.0 1.2448889527931885E-4 1.8673334291897828E-4 13 0.0 0.0 0.0 1.2448889527931885E-4 1.8673334291897828E-4 14 0.0 0.0 0.0 1.2448889527931885E-4 3.1122223819829713E-4 15 0.0 0.0 0.0 1.2448889527931885E-4 3.7346668583795655E-4 16 0.0 0.0 0.0 2.489777905586377E-4 3.7346668583795655E-4 17 0.0 0.0 0.0 3.1122223819829713E-4 3.7346668583795655E-4 18 0.0 0.0 0.0 3.1122223819829713E-4 3.7346668583795655E-4 19 0.0 0.0 0.0 4.35711133477616E-4 3.7346668583795655E-4 20 0.0 0.0 0.0 4.35711133477616E-4 3.7346668583795655E-4 21 6.224444763965943E-5 0.0 0.0 4.979555811172754E-4 4.35711133477616E-4 22 6.224444763965943E-5 0.0 0.0 7.469333716759131E-4 4.35711133477616E-4 23 6.224444763965943E-5 0.0 0.0 9.336667145948914E-4 4.979555811172754E-4 24 6.224444763965943E-5 0.0 0.0 0.001307133400432848 4.979555811172754E-4 25 6.224444763965943E-5 6.224444763965943E-5 0.0 0.0015561111909914856 4.979555811172754E-4 26 6.224444763965943E-5 6.224444763965943E-5 0.0 0.0021785556673880797 5.602000287569348E-4 27 6.224444763965943E-5 6.224444763965943E-5 0.0 0.008216267088435043 5.602000287569348E-4 28 6.224444763965943E-5 6.224444763965943E-5 0.0 0.032055890534424605 5.602000287569348E-4 29 6.224444763965943E-5 6.224444763965943E-5 0.0 0.06772195903194946 5.602000287569348E-4 30 6.224444763965943E-5 6.224444763965943E-5 0.0 0.11639711708616313 5.602000287569348E-4 31 6.224444763965943E-5 6.224444763965943E-5 0.0 0.3493158401537687 5.602000287569348E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTATA 1100 0.0 17.49091 37 CTTATAC 600 0.0 17.266666 37 ATTAGAC 65 0.001580304 17.076923 3 TACTTAC 315 0.0 15.857143 31 GTATTAT 95 7.062471E-5 15.578948 1 TATTCCG 85 5.3658016E-4 15.235293 5 TATACCG 100 1.0937943E-4 14.799999 5 ATAGACC 90 8.27654E-4 14.388888 4 GAGTAAT 105 1.6562776E-4 14.095239 1 ATACCGG 105 1.6562776E-4 14.095239 6 GTACTTA 345 0.0 13.942028 30 GTATATA 120 3.301964E-5 13.875001 1 ATTATAC 120 3.301964E-5 13.875001 3 TATACTG 200 9.840733E-10 13.874999 5 CGTGTAA 95 0.001245451 13.631579 1 CTCTTAT 1840 0.0 13.472825 37 AGGGCGT 400 0.0 13.412499 10 TAGACAG 305 0.0 13.344261 5 TTATACT 195 1.0264557E-8 13.28205 4 TAGACCG 85 0.00940686 13.058823 5 >>END_MODULE