##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727569.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1149569 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47632808469957 34.0 31.0 34.0 31.0 34.0 2 32.65424693950516 34.0 31.0 34.0 31.0 34.0 3 32.75307876256232 34.0 31.0 34.0 31.0 34.0 4 36.24185325108802 37.0 37.0 37.0 35.0 37.0 5 36.08255180854738 37.0 35.0 37.0 35.0 37.0 6 36.09968344657867 37.0 35.0 37.0 35.0 37.0 7 36.07003581342225 37.0 35.0 37.0 35.0 37.0 8 36.05503366914035 37.0 35.0 37.0 35.0 37.0 9 37.759863044323566 39.0 37.0 39.0 35.0 39.0 10 37.71763765376415 39.0 37.0 39.0 35.0 39.0 11 37.80325495903247 39.0 37.0 39.0 35.0 39.0 12 37.76620542133617 39.0 37.0 39.0 35.0 39.0 13 37.803418498585124 39.0 37.0 39.0 35.0 39.0 14 39.13406850741452 40.0 39.0 41.0 36.0 41.0 15 39.149464712427005 40.0 39.0 41.0 36.0 41.0 16 39.12910229833964 40.0 38.0 41.0 36.0 41.0 17 39.13590397792564 40.0 38.0 41.0 36.0 41.0 18 39.10732196153515 40.0 38.0 41.0 36.0 41.0 19 39.14346594245322 40.0 39.0 41.0 36.0 41.0 20 39.12389860895692 40.0 39.0 41.0 36.0 41.0 21 39.101812940328074 40.0 39.0 41.0 36.0 41.0 22 39.069544324873064 40.0 39.0 41.0 36.0 41.0 23 39.02979290499309 40.0 39.0 41.0 36.0 41.0 24 38.983090184234264 40.0 38.0 41.0 36.0 41.0 25 38.92335127339029 40.0 38.0 41.0 35.0 41.0 26 38.816346822156824 40.0 38.0 41.0 35.0 41.0 27 38.77693900931567 40.0 38.0 41.0 35.0 41.0 28 38.709140556156264 40.0 38.0 41.0 35.0 41.0 29 38.63169065971682 40.0 38.0 41.0 35.0 41.0 30 38.566125217364075 40.0 38.0 41.0 35.0 41.0 31 38.50487269576685 40.0 38.0 41.0 34.0 41.0 32 38.41519212852817 40.0 38.0 41.0 34.0 41.0 33 38.368824315895786 40.0 38.0 41.0 34.0 41.0 34 38.327126949317524 40.0 38.0 41.0 34.0 41.0 35 38.313174763759285 40.0 38.0 41.0 34.0 41.0 36 38.263866718744154 40.0 38.0 41.0 34.0 41.0 37 38.2484574653631 40.0 38.0 41.0 34.0 41.0 38 38.20514732043053 40.0 38.0 41.0 34.0 41.0 39 38.166481524814955 40.0 38.0 41.0 34.0 41.0 40 38.114256734480485 40.0 38.0 41.0 33.0 41.0 41 38.07214268999947 40.0 38.0 41.0 33.0 41.0 42 38.03201460721366 40.0 38.0 41.0 33.0 41.0 43 36.92533984475921 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 0.0 14 1.0 15 1.0 16 3.0 17 9.0 18 11.0 19 25.0 20 69.0 21 116.0 22 277.0 23 439.0 24 861.0 25 1374.0 26 2112.0 27 3266.0 28 4728.0 29 6803.0 30 9668.0 31 13310.0 32 18195.0 33 24706.0 34 35750.0 35 51154.0 36 78418.0 37 134758.0 38 317790.0 39 445723.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.357380026775246 16.56151131424038 11.934559821985458 28.146548836998907 2 18.384194424171145 19.140999800794905 35.04635215459011 27.42845362044384 3 19.95147746677233 20.865037244393335 29.0703733312224 30.113111957611938 4 15.42673819492349 14.277002946321621 32.94104138159606 37.35521747715883 5 16.362306220853206 34.76807394771432 33.21949356671936 15.650126264713125 6 37.838529048713035 32.61892065635033 14.447327650623842 15.09522264431278 7 31.531295642105867 29.29767591158077 19.82386442223129 19.34716402408207 8 28.518340351905803 34.26545079068764 18.617673232315763 18.598535625090797 9 28.69031784955927 13.785514397134927 17.035080103934604 40.4890876493712 10 16.99471715051467 25.836204699326444 32.24947784778469 24.919600302374196 11 38.62612857514425 20.204180871265663 19.86675006023997 21.302940493350118 12 23.031762338754785 22.94999256242992 28.979382707780044 25.03886239103525 13 32.46608076592183 18.19412318877771 22.78732290101769 26.552473144282768 14 23.744986164379867 18.30807894089002 23.891127892279627 34.055807002450486 15 27.03621966145573 25.517476549906963 20.778483066262226 26.66782072237508 16 26.403721742670516 24.285014644618983 22.963562865734897 26.347700746975605 17 25.897792998941345 24.203766803036615 23.59919239297511 26.29924780504693 18 26.103870233104754 24.23864944166031 24.114168005574264 25.54331231966067 19 27.24777721041538 23.86677093762967 23.7270664048874 25.158385447067555 20 26.431819229641718 23.495849313960278 23.79143835646229 26.280893099935714 21 26.065073083912317 24.187151880400393 24.028309740433155 25.719465295254135 22 26.816485134863587 23.336311261003036 23.2357518339482 26.611451770185173 23 26.19138129159711 23.58979756761012 23.734460480406135 26.48436066038663 24 25.94346228891002 23.255237397668168 23.887735316453384 26.913564996968432 25 26.488623127450374 22.895972316581258 23.594494980292612 27.020909575675756 26 26.139622762965946 23.381893561847964 24.068672693853088 26.409810981333003 27 26.670256417840076 23.723934796432403 23.448353252392852 26.157455533334666 28 26.291853729528196 24.23769256129906 22.99896743910109 26.471486270071654 29 26.2293955386758 24.101728560878033 23.87686167598465 25.792014224461518 30 26.965497503847097 23.670001539707492 23.197824575993266 26.166676380452152 31 26.244009711465775 23.56022126553517 23.84189204823721 26.353876974761846 32 25.802800875806497 23.752554218146106 23.709929547508676 26.734715358538725 33 25.846295437681427 23.41303566815041 23.903915293470856 26.836753600697307 34 26.384062200703045 23.372933682101728 24.572513698612262 25.670490418582965 35 26.150322425187177 23.18790781588578 24.16444771910168 26.49732203982536 36 25.78218445347778 23.101701594249672 24.67055044107835 26.445563511194198 37 25.335147346527265 22.61899894656171 25.08783726770642 26.958016439204606 38 25.667358810127972 22.361424151138383 24.992236220705326 26.97898081802832 39 24.870016501836776 22.57733115628553 25.91606071492881 26.63659162694888 40 25.756261694600326 21.84427381044548 26.19407795443336 26.205386540520838 41 24.89994076040673 22.19301320755866 26.33091184609188 26.576134185942728 42 24.25074092986154 22.269215679963533 26.89033890092722 26.589704489247712 43 23.87773156722215 21.769028218401854 26.720536131367496 27.632704083008502 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 14.5 2 15.0 3 34.0 4 53.0 5 53.0 6 72.0 7 91.0 8 92.5 9 94.0 10 120.5 11 147.0 12 147.0 13 267.5 14 388.0 15 596.5 16 805.0 17 760.5 18 716.0 19 716.0 20 1002.5 21 1289.0 22 1478.0 23 1667.0 24 2374.5 25 3082.0 26 3082.0 27 4116.5 28 5151.0 29 6567.5 30 7984.0 31 10549.0 32 13114.0 33 13114.0 34 16726.5 35 20339.0 36 24469.0 37 28599.0 38 34083.5 39 39568.0 40 39568.0 41 45560.5 42 51553.0 43 59150.5 44 66748.0 45 75979.0 46 85210.0 47 85210.0 48 94336.5 49 103463.0 50 110614.0 51 117765.0 52 120368.0 53 122971.0 54 122971.0 55 117594.5 56 112218.0 57 104911.0 58 97604.0 59 91028.0 60 84452.0 61 84452.0 62 74319.5 63 64187.0 64 54250.5 65 44314.0 66 37001.0 67 29688.0 68 29688.0 69 24190.5 70 18693.0 71 15066.5 72 11440.0 73 9198.0 74 6956.0 75 6956.0 76 5580.0 77 4204.0 78 3383.5 79 2563.0 80 1989.0 81 1415.0 82 1415.0 83 1006.0 84 597.0 85 430.5 86 264.0 87 181.0 88 98.0 89 98.0 90 67.5 91 37.0 92 23.5 93 10.0 94 6.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1149569.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.2384002315717 #Duplication Level Percentage of deduplicated Percentage of total 1 85.53361441119225 61.78811471088635 2 8.281662361045521 11.965080804398989 3 2.608284364851772 5.652548695977393 4 1.170194378522881 3.381318794578848 5 0.6760809344442625 2.4419502565659816 6 0.4167604819861027 1.8063666299048888 7 0.29834626311374135 1.508643973368297 8 0.20639393298252587 1.1927654028927914 9 0.15263454759067924 0.9923467984218328 >10 0.630904143892324 7.256160154397567 >50 0.01728375194555804 0.8581580679500079 >100 0.007478564025718647 1.0149513040320695 >500 3.6186440666807014E-4 0.14159440662492817 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.698912374985756E-5 8.698912374985756E-5 5 0.0 8.698912374985756E-5 0.0 1.7397824749971512E-4 8.698912374985756E-5 6 0.0 8.698912374985756E-5 0.0 1.7397824749971512E-4 8.698912374985756E-5 7 0.0 8.698912374985756E-5 0.0 1.7397824749971512E-4 8.698912374985756E-5 8 0.0 8.698912374985756E-5 0.0 1.7397824749971512E-4 1.7397824749971512E-4 9 0.0 8.698912374985756E-5 0.0 1.7397824749971512E-4 1.7397824749971512E-4 10 0.0 8.698912374985756E-5 0.0 3.4795649499943024E-4 1.7397824749971512E-4 11 0.0 8.698912374985756E-5 0.0 3.4795649499943024E-4 1.7397824749971512E-4 12 0.0 8.698912374985756E-5 0.0 3.4795649499943024E-4 1.7397824749971512E-4 13 0.0 8.698912374985756E-5 0.0 3.4795649499943024E-4 1.7397824749971512E-4 14 8.698912374985756E-5 8.698912374985756E-5 0.0 3.4795649499943024E-4 2.6096737124957267E-4 15 8.698912374985756E-5 8.698912374985756E-5 0.0 3.4795649499943024E-4 3.4795649499943024E-4 16 8.698912374985756E-5 8.698912374985756E-5 0.0 4.3494561874928776E-4 3.4795649499943024E-4 17 8.698912374985756E-5 8.698912374985756E-5 0.0 5.219347424991453E-4 3.4795649499943024E-4 18 8.698912374985756E-5 8.698912374985756E-5 0.0 6.959129899988605E-4 4.3494561874928776E-4 19 8.698912374985756E-5 8.698912374985756E-5 0.0 6.959129899988605E-4 5.219347424991453E-4 20 8.698912374985756E-5 8.698912374985756E-5 0.0 7.829021137487179E-4 5.219347424991453E-4 21 8.698912374985756E-5 8.698912374985756E-5 0.0 9.568803612484331E-4 5.219347424991453E-4 22 8.698912374985756E-5 8.698912374985756E-5 0.0 0.001391825979997721 5.219347424991453E-4 23 8.698912374985756E-5 8.698912374985756E-5 0.0 0.0015658042274974359 6.089238662490029E-4 24 8.698912374985756E-5 8.698912374985756E-5 0.0 0.0018267715987470086 6.089238662490029E-4 25 8.698912374985756E-5 8.698912374985756E-5 0.0 0.0022617172174962965 6.959129899988605E-4 26 8.698912374985756E-5 8.698912374985756E-5 0.0 0.003653543197494017 6.959129899988605E-4 27 8.698912374985756E-5 8.698912374985756E-5 0.0 0.011917509953730485 6.959129899988605E-4 28 8.698912374985756E-5 8.698912374985756E-5 0.0 0.04593025733992479 6.959129899988605E-4 29 8.698912374985756E-5 8.698912374985756E-5 0.0 0.0977757750948399 6.959129899988605E-4 30 8.698912374985756E-5 8.698912374985756E-5 0.0 0.16962879131222222 6.959129899988605E-4 31 8.698912374985756E-5 8.698912374985756E-5 0.0 0.5217607642516456 6.959129899988605E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATACG 50 2.7207898E-7 29.6 1 TTAGTAC 40 0.0019311877 23.125 3 TACATAT 95 7.1449904E-9 21.421053 35 CTTATAC 810 0.0 20.78395 37 TTACATA 105 2.2593667E-8 19.38095 34 TCGTTAC 185 0.0 18.0 23 TCTATAC 105 4.797257E-7 17.619047 3 CCTTATA 95 3.6063884E-6 17.526316 2 CTCGTTA 255 0.0 16.686274 22 GTATATA 90 4.445959E-5 16.444445 1 CGTTACG 215 0.0 16.348837 24 TCTTATA 1335 0.0 16.213484 37 TAGACCG 70 0.0025924942 15.857142 5 GCTTATA 140 3.4726327E-8 15.857142 1 GTGCGAT 70 0.0025924942 15.857142 11 ATAGACT 130 2.5887675E-7 15.653848 4 TACTTAC 225 0.0 15.622222 31 ATCTCGT 320 0.0 15.609375 20 TATACTG 145 5.3445547E-8 15.310345 5 TCTCGTT 285 0.0 14.929824 21 >>END_MODULE