##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727566.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3204145 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69278793562713 34.0 31.0 34.0 31.0 34.0 2 32.86397213609247 34.0 31.0 34.0 31.0 34.0 3 32.95443339798917 34.0 31.0 34.0 31.0 34.0 4 36.381923102730994 37.0 37.0 37.0 35.0 37.0 5 36.25451532312052 37.0 37.0 37.0 35.0 37.0 6 36.274566850126945 37.0 37.0 37.0 35.0 37.0 7 36.252133720540115 37.0 37.0 37.0 35.0 37.0 8 36.24028500582839 37.0 37.0 37.0 35.0 37.0 9 37.966622609151585 39.0 38.0 39.0 35.0 39.0 10 37.95489093034179 39.0 38.0 39.0 35.0 39.0 11 38.02247432622431 39.0 38.0 39.0 35.0 39.0 12 38.00265187748994 39.0 38.0 39.0 35.0 39.0 13 38.02783769149024 39.0 38.0 39.0 35.0 39.0 14 39.41824074753171 40.0 39.0 41.0 37.0 41.0 15 39.440825867743186 40.0 39.0 41.0 37.0 41.0 16 39.42719571055617 40.0 39.0 41.0 37.0 41.0 17 39.4431734518881 40.0 39.0 41.0 37.0 41.0 18 39.42140976766033 40.0 39.0 41.0 37.0 41.0 19 39.45791872714874 40.0 39.0 41.0 37.0 41.0 20 39.43627488768455 40.0 39.0 41.0 37.0 41.0 21 39.42032148982022 40.0 39.0 41.0 37.0 41.0 22 39.39300936755359 40.0 39.0 41.0 37.0 41.0 23 39.356887406780906 40.0 39.0 41.0 36.0 41.0 24 39.32647461335239 40.0 39.0 41.0 36.0 41.0 25 39.27117031220497 40.0 39.0 41.0 36.0 41.0 26 39.184295030343506 40.0 39.0 41.0 36.0 41.0 27 39.14639131499979 40.0 39.0 41.0 36.0 41.0 28 39.08963358399823 40.0 39.0 41.0 36.0 41.0 29 39.01949724497487 40.0 39.0 41.0 36.0 41.0 30 38.96599623300444 40.0 38.0 41.0 35.0 41.0 31 38.90132625084071 40.0 38.0 41.0 35.0 41.0 32 38.820662610462385 40.0 38.0 41.0 35.0 41.0 33 38.777418937033126 40.0 38.0 41.0 35.0 41.0 34 38.73799999687904 40.0 38.0 41.0 35.0 41.0 35 38.72746520522635 40.0 38.0 41.0 35.0 41.0 36 38.66645080044754 40.0 38.0 41.0 35.0 41.0 37 38.646367751771535 40.0 38.0 41.0 35.0 41.0 38 38.607239060654244 40.0 38.0 41.0 35.0 41.0 39 38.56718406938513 40.0 38.0 41.0 35.0 41.0 40 38.51547042970902 40.0 38.0 41.0 35.0 41.0 41 38.47252137465689 40.0 38.0 41.0 35.0 41.0 42 38.426476017783216 40.0 38.0 41.0 34.0 41.0 43 37.390016681517224 39.0 37.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 3.0 13 1.0 14 4.0 15 1.0 16 5.0 17 10.0 18 36.0 19 58.0 20 116.0 21 265.0 22 486.0 23 888.0 24 1540.0 25 2685.0 26 4213.0 27 6631.0 28 9795.0 29 14264.0 30 20320.0 31 28452.0 32 39457.0 33 54440.0 34 79508.0 35 117714.0 36 183245.0 37 319792.0 38 772356.0 39 1547859.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.239709813382355 17.014429746469027 12.14632920794783 27.599531232200793 2 18.330069332068305 19.65800548976404 35.92434175107556 26.087583427092092 3 19.98139909398607 21.521029791098716 29.43393635431605 29.06363476059916 4 15.329175177777534 14.668093984510689 33.427887938904135 36.57484289880764 5 16.06431668978776 35.29125554555115 33.27464893130617 15.36977883335492 6 36.75333045164935 32.93752311459063 14.962868409513302 15.346278024246718 7 30.38451755460505 29.849741506704596 20.497917541184936 19.267823397505417 8 27.40303575524828 34.74739751166068 19.279214891960258 18.570351841130787 9 28.456327663073928 14.22460594011819 17.959330804317535 39.35973559249035 10 16.941742648975 26.279834402001157 32.69730302467585 24.081119924347995 11 37.34259841548994 20.952734660884573 20.46124629191251 21.243420631712983 12 22.169814412269105 23.50146450925286 29.62075686337541 24.707964215102624 13 31.68399058095061 19.148758873271966 23.254596780108265 25.91265376566916 14 23.178476629490863 19.445281034410115 24.437439628980588 32.938802707118434 15 26.565183535701415 26.47155481415479 21.412170797513845 25.551090852629954 16 25.35902713516398 25.314928007315523 23.815214355155586 25.510830502364907 17 25.11069255604849 24.924621076761508 24.300866533817914 25.663819833372088 18 25.045589384999744 25.179540875959113 24.92290455019982 24.85196518884133 19 26.413661054665127 24.629971490054288 24.685493321931435 24.270874133349146 20 25.435958734701458 24.13692264238978 24.755621234369855 25.67149738853891 21 25.092965518102332 24.939632881782817 25.36439518186599 24.603006418248864 22 25.9432703576149 23.92897325183473 24.189479564751284 25.938276825799083 23 25.18444077905338 24.425236685605675 24.89934132194392 25.490981213397024 24 24.88320597226405 24.124251555407135 25.001490257151282 25.99105221517753 25 25.515824034180724 23.8564734117838 24.502043446847754 26.125659107187722 26 25.11755866229525 24.292034224418682 25.018031331291184 25.572375781994882 27 25.788033937290606 24.709368645925824 24.338723746896598 25.16387366988698 28 25.23378311530845 25.256690942513526 23.728482949429566 25.781042992748453 29 25.1646539092332 25.104388222131018 24.8195696511862 24.911388217449584 30 26.29915312821361 24.362380603874044 24.046508506949593 25.291957760962752 31 25.480900521043836 24.28594835751815 24.877650668118953 25.355500453319056 32 24.972683820488772 24.678315119946195 24.677191575287637 25.671809484277397 33 24.961042649443144 24.003095989725807 24.788953059240455 26.246908301590594 34 25.469540236162846 24.23089466924874 25.52877600732801 24.770789087260408 35 25.376722963536295 23.94869770250722 24.94172392323069 25.732855410725797 36 24.90508388353211 23.79605167681238 25.646248843295172 25.65261559636034 37 24.40847714444883 23.56185503465043 26.148566934392793 25.881100886507944 38 25.083945951260006 23.03160437495806 25.899264858487992 25.985184815293938 39 23.95281736625527 23.508673920811948 26.916540918092036 25.621967794840746 40 25.087628680974177 22.659242949367147 26.942569702681997 25.31055866697668 41 24.0089009704617 23.301411140881577 26.993659775072604 25.696028113584124 42 23.665595658124086 23.368636562952048 27.337995003347228 25.627772775576634 43 23.19386294939836 23.01471999550582 26.94356840904516 26.847848646050664 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 165.0 1 226.0 2 287.0 3 522.5 4 758.0 5 758.0 6 958.0 7 1158.0 8 1108.0 9 1058.0 10 1434.0 11 1810.0 12 1810.0 13 2940.0 14 4070.0 15 5332.0 16 6594.0 17 6561.5 18 6529.0 19 6529.0 20 8210.0 21 9891.0 22 10658.0 23 11425.0 24 14742.0 25 18059.0 26 18059.0 27 22444.0 28 26829.0 29 31969.5 30 37110.0 31 45321.0 32 53532.0 33 53532.0 34 64712.5 35 75893.0 36 87608.0 37 99323.0 38 113897.5 39 128472.0 40 128472.0 41 144441.5 42 160411.0 43 179077.5 44 197744.0 45 221613.0 46 245482.0 47 245482.0 48 269304.0 49 293126.0 50 308109.0 51 323092.0 52 321957.0 53 320822.0 54 320822.0 55 303036.5 56 285251.0 57 263771.5 58 242292.0 59 225076.5 60 207861.0 61 207861.0 62 181922.5 63 155984.0 64 131254.0 65 106524.0 66 88619.0 67 70714.0 68 70714.0 69 57766.5 70 44819.0 71 36401.5 72 27984.0 73 22621.5 74 17259.0 75 17259.0 76 13782.0 77 10305.0 78 8136.5 79 5968.0 80 4524.5 81 3081.0 82 3081.0 83 2277.0 84 1473.0 85 1061.5 86 650.0 87 437.0 88 224.0 89 224.0 90 149.5 91 75.0 92 48.5 93 22.0 94 16.0 95 10.0 96 10.0 97 7.5 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3204145.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.28912229745649 #Duplication Level Percentage of deduplicated Percentage of total 1 82.00418863727566 50.25964746293678 2 9.491070422113651 11.63398751669391 3 3.1810350868653656 5.848885454141745 4 1.5545948021545 3.8111900380894923 5 0.8956622353986563 2.7447176141280756 6 0.5762794159485523 2.1191795760946572 7 0.4124623672387695 1.7695619528156747 8 0.30368371857149745 1.4890006853819893 9 0.23983585875129335 1.3229396350491167 >10 1.2691945708267396 13.625885065255183 >50 0.049136940873778144 2.026865604660456 >100 0.021073468244065106 2.3373295216984427 >500 0.001324124834335702 0.5504144428193901 >1k 4.5835090312400234E-4 0.4603954302350778 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.120957384887388E-5 2 0.0 0.0 0.0 0.0 3.120957384887388E-5 3 0.0 0.0 0.0 3.120957384887388E-5 3.120957384887388E-5 4 0.0 0.0 0.0 3.120957384887388E-5 3.120957384887388E-5 5 3.120957384887388E-5 3.120957384887388E-5 0.0 3.120957384887388E-5 3.120957384887388E-5 6 3.120957384887388E-5 3.120957384887388E-5 0.0 3.120957384887388E-5 6.241914769774776E-5 7 3.120957384887388E-5 3.120957384887388E-5 0.0 3.120957384887388E-5 6.241914769774776E-5 8 3.120957384887388E-5 3.120957384887388E-5 0.0 6.241914769774776E-5 6.241914769774776E-5 9 3.120957384887388E-5 3.120957384887388E-5 0.0 1.8725744309324328E-4 9.362872154662164E-5 10 3.120957384887388E-5 3.120957384887388E-5 0.0 2.1846701694211716E-4 9.362872154662164E-5 11 3.120957384887388E-5 3.120957384887388E-5 0.0 2.1846701694211716E-4 9.362872154662164E-5 12 3.120957384887388E-5 3.120957384887388E-5 0.0 2.1846701694211716E-4 1.2483829539549553E-4 13 3.120957384887388E-5 3.120957384887388E-5 0.0 2.4967659079099105E-4 1.2483829539549553E-4 14 3.120957384887388E-5 3.120957384887388E-5 0.0 3.1209573848873883E-4 2.1846701694211716E-4 15 3.120957384887388E-5 3.120957384887388E-5 0.0 4.0572446003536044E-4 2.8088616463986494E-4 16 3.120957384887388E-5 3.120957384887388E-5 0.0 5.305627554308559E-4 2.8088616463986494E-4 17 3.120957384887388E-5 3.120957384887388E-5 0.0 6.866106246752253E-4 2.8088616463986494E-4 18 3.120957384887388E-5 3.120957384887388E-5 0.0 8.426584939195948E-4 3.4330531233761266E-4 19 3.120957384887388E-5 3.120957384887388E-5 0.0 9.674967893150903E-4 3.4330531233761266E-4 20 3.120957384887388E-5 3.120957384887388E-5 0.0 9.987063631639642E-4 3.7451488618648655E-4 21 3.120957384887388E-5 3.120957384887388E-5 0.0 0.0013732212493504507 3.7451488618648655E-4 22 3.120957384887388E-5 3.120957384887388E-5 0.0 0.0017165265616880634 3.7451488618648655E-4 23 3.120957384887388E-5 3.120957384887388E-5 0.0 0.002309508464816667 4.993531815819821E-4 24 6.241914769774776E-5 3.120957384887388E-5 0.0 0.0035891009926204962 4.993531815819821E-4 25 6.241914769774776E-5 3.120957384887388E-5 0.0 0.004494178634237839 5.305627554308559E-4 26 6.241914769774776E-5 3.120957384887388E-5 0.0 0.006928525394450002 5.617723292797299E-4 27 6.241914769774776E-5 3.120957384887388E-5 0.0 0.019443564507848426 5.617723292797299E-4 28 6.241914769774776E-5 3.120957384887388E-5 0.0 0.059329399886709246 5.617723292797299E-4 29 6.241914769774776E-5 3.120957384887388E-5 0.0 0.1151945370761935 5.617723292797299E-4 30 6.241914769774776E-5 6.241914769774776E-5 0.0 0.194997417407764 5.617723292797299E-4 31 6.241914769774776E-5 6.241914769774776E-5 0.0 0.5539699358175114 5.617723292797299E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2130 0.0 20.758215 37 TACTTAC 905 0.0 17.78453 31 GTACTTA 1065 0.0 15.98122 30 TATTCCG 115 2.212173E-5 14.47826 5 TAAGACT 410 0.0 14.439025 4 TCTTATA 3400 0.0 14.419118 37 TATACTG 445 0.0 14.13483 5 ACTTACA 925 0.0 13.6 32 CTCGTTA 1200 0.0 13.4125 22 ATCTCGT 1315 0.0 13.365019 20 ACGGATG 1935 0.0 13.289406 28 TTTATAC 335 0.0 13.253732 3 TACGGAT 1885 0.0 13.249337 27 GGTATCA 3100 0.0 13.188709 1 AGTGTAC 1425 0.0 13.11228 27 GTTACGG 1510 0.0 13.109272 25 GTATACG 85 0.009409529 13.058824 1 TCGTTAC 1110 0.0 13.0 23 GTATTAT 315 0.0 12.920635 1 GTATAGG 375 0.0 12.826668 1 >>END_MODULE