##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727565.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1011905 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.645783942168485 34.0 31.0 34.0 31.0 34.0 2 32.81926465429067 34.0 31.0 34.0 31.0 34.0 3 32.90949644482436 34.0 31.0 34.0 31.0 34.0 4 36.35694358660151 37.0 37.0 37.0 35.0 37.0 5 36.21704409010727 37.0 35.0 37.0 35.0 37.0 6 36.23580474451653 37.0 36.0 37.0 35.0 37.0 7 36.21300912635079 37.0 36.0 37.0 35.0 37.0 8 36.20344498742471 37.0 36.0 37.0 35.0 37.0 9 37.93727474417065 39.0 38.0 39.0 35.0 39.0 10 37.912300067694105 39.0 38.0 39.0 35.0 39.0 11 37.99634451850717 39.0 38.0 39.0 35.0 39.0 12 37.9651953493658 39.0 38.0 39.0 35.0 39.0 13 38.00119181148428 39.0 38.0 39.0 35.0 39.0 14 39.352912575785275 40.0 39.0 41.0 37.0 41.0 15 39.37947633424086 40.0 39.0 41.0 37.0 41.0 16 39.358761939114835 40.0 39.0 41.0 36.0 41.0 17 39.37429205310775 40.0 39.0 41.0 37.0 41.0 18 39.34629337734273 40.0 39.0 41.0 36.0 41.0 19 39.380099910564724 40.0 39.0 41.0 37.0 41.0 20 39.35569445748366 40.0 39.0 41.0 37.0 41.0 21 39.336647214906534 40.0 39.0 41.0 36.0 41.0 22 39.31031865639561 40.0 39.0 41.0 36.0 41.0 23 39.27294459460127 40.0 39.0 41.0 36.0 41.0 24 39.236448085541625 40.0 39.0 41.0 36.0 41.0 25 39.17533562933279 40.0 39.0 41.0 36.0 41.0 26 39.09105597857506 40.0 39.0 41.0 36.0 41.0 27 39.05290911696256 40.0 39.0 41.0 36.0 41.0 28 38.97735162885844 40.0 38.0 41.0 36.0 41.0 29 38.90611569267866 40.0 38.0 41.0 35.0 41.0 30 38.850916835078394 40.0 38.0 41.0 35.0 41.0 31 38.783155533375165 40.0 38.0 41.0 35.0 41.0 32 38.70057959986362 40.0 38.0 41.0 35.0 41.0 33 38.66519386701321 40.0 38.0 41.0 35.0 41.0 34 38.62061063044456 40.0 38.0 41.0 35.0 41.0 35 38.6151239493826 40.0 38.0 41.0 35.0 41.0 36 38.5429956369422 40.0 38.0 41.0 35.0 41.0 37 38.53872843794625 40.0 38.0 41.0 35.0 41.0 38 38.502035270109346 40.0 38.0 41.0 35.0 41.0 39 38.46123895029672 40.0 38.0 41.0 34.0 41.0 40 38.414585361274035 40.0 38.0 41.0 34.0 41.0 41 38.36267040878343 40.0 38.0 41.0 34.0 41.0 42 38.32981258122057 40.0 38.0 41.0 34.0 41.0 43 37.23069754571822 39.0 36.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 0.0 14 0.0 15 0.0 16 1.0 17 4.0 18 7.0 19 19.0 20 37.0 21 75.0 22 142.0 23 309.0 24 554.0 25 860.0 26 1326.0 27 2066.0 28 3166.0 29 4524.0 30 6225.0 31 9112.0 32 12789.0 33 17945.0 34 26722.0 35 40394.0 36 63106.0 37 109732.0 38 261680.0 39 451106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.793241460413775 16.110998562117985 11.793498401529789 28.302261575938452 2 19.32523309994515 19.221962536008817 34.16714019596701 27.28566416807902 3 20.688009249880178 20.549557517751172 28.94125436676368 29.821178865604974 4 16.261506761998408 14.15310725809241 31.767112525385286 37.81827345452389 5 17.092414801784752 34.327036628932554 32.45779000993176 16.122758559350927 6 38.46546859636033 31.318453807422635 14.238589590920094 15.977488005296939 7 31.394152613140562 29.095814330396628 19.510823644512083 19.999209411950726 8 28.509197997835766 33.475968593889746 18.78447087424215 19.230362534032345 9 29.22873194618072 13.50858035092227 16.861266620878443 40.401421082018565 10 17.54512528349993 25.576215158537607 31.89133367262737 24.987325885335085 11 38.70679559840104 19.927463546479167 19.376720146654083 21.989020708465716 12 23.15167925842841 22.639279378993088 28.250873352735685 25.95816800984282 13 33.050533399874496 18.05792045695989 22.110474797535343 26.78107134563027 14 24.09643197731012 18.69691324778512 23.21186277367935 33.99479200122541 15 28.120920442136367 25.266205819716276 20.379185793132752 26.2336879450146 16 26.46572553747634 24.185867250384177 22.871613441973306 26.476793770166175 17 26.26728793710872 23.621980324239924 23.1596839624273 26.95104777622405 18 26.153146787494876 24.168869607324797 23.83099203976658 25.846991565413752 19 27.738967590831155 23.687203838304978 23.438465073302336 25.13536349756153 20 26.575320805806868 22.92873342853331 23.49805564751632 26.997890118143502 21 26.250487941061664 23.91815437219897 24.28459193303719 25.54676575370218 22 27.398718259125115 22.777533464109773 22.640959378597795 27.18278889816732 23 26.442897307553576 23.372352147681845 23.561994456001305 26.62275608876327 24 25.856280974992714 22.944248719000303 23.773773229700417 27.42569707630657 25 26.772770171112903 22.422658253492177 23.096931036016226 27.707640539378698 26 26.224793829460275 23.082305157104667 23.854017916701668 26.83888309673339 27 27.26501005529175 23.48688859132033 23.14950514129291 26.09859621209501 28 26.34071380218499 24.40476131652675 22.21631477263182 27.038210108656447 29 26.31630439616367 24.107006092469156 23.694615601266918 25.882073910100257 30 27.684614662443607 23.16007925645194 22.704404069551984 26.45090201155247 31 26.542906695786662 23.24032394345319 23.748869706148305 26.46789965461185 32 26.076756217233832 23.398836847332507 23.513076820452515 27.011330114981146 33 26.105217387007674 22.813307573339394 23.595396801083105 27.486078238569828 34 26.58144786318874 23.167095725389242 24.428182487486474 25.823273923935545 35 26.54745257706998 22.764192290778283 23.86054026810817 26.82781486404356 36 25.806968045419282 22.543717048537165 24.78078475746241 26.868530148581144 37 25.131114086796686 22.305552398693553 25.423236371003206 27.14009714350655 38 26.029716228302064 21.476126711499596 25.1199470306007 27.37421002959764 39 24.676031840933685 22.11383479674475 26.41473260829821 26.79540075402335 40 26.136149144435493 21.031915051314108 26.44220554301046 26.38973026123994 41 24.82841768743113 21.703816069690337 26.635800791576287 26.83196545130225 42 24.20563195161601 21.761627820793453 27.20176301134988 26.830977216240655 43 23.609923856488503 21.357637327614746 26.703297246283004 28.329141569613746 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 15.0 2 23.0 3 43.0 4 63.0 5 63.0 6 67.0 7 71.0 8 82.5 9 94.0 10 118.0 11 142.0 12 142.0 13 227.5 14 313.0 15 459.0 16 605.0 17 604.5 18 604.0 19 604.0 20 775.0 21 946.0 22 1105.0 23 1264.0 24 1747.5 25 2231.0 26 2231.0 27 2966.5 28 3702.0 29 4716.5 30 5731.0 31 7545.5 32 9360.0 33 9360.0 34 12087.0 35 14814.0 36 17931.0 37 21048.0 38 25261.5 39 29475.0 40 29475.0 41 34598.0 42 39721.0 43 46649.0 44 53577.0 45 62447.5 46 71318.0 47 71318.0 48 81770.5 49 92223.0 50 101079.0 51 109935.0 52 112487.0 53 115039.0 54 115039.0 55 108597.5 56 102156.0 57 95622.5 58 89089.0 59 83220.5 60 77352.0 61 77352.0 62 68444.5 63 59537.0 64 50201.5 65 40866.0 66 34046.0 67 27226.0 68 27226.0 69 22338.5 70 17451.0 71 14072.0 72 10693.0 73 8636.0 74 6579.0 75 6579.0 76 5300.5 77 4022.0 78 3198.0 79 2374.0 80 1843.5 81 1313.0 82 1313.0 83 924.5 84 536.0 85 393.5 86 251.0 87 182.5 88 114.0 89 114.0 90 69.0 91 24.0 92 17.5 93 11.0 94 7.5 95 4.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1011905.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.63618816308639 #Duplication Level Percentage of deduplicated Percentage of total 1 86.45023630520855 62.794156310084105 2 7.826350011814977 11.369524641767319 3 2.394776718977388 5.218423571046606 4 1.1186939816004104 3.2503066617775884 5 0.6423610215113237 2.3329328013564443 6 0.40120798205195257 1.7485331086114688 7 0.26207435896239273 1.3325257715218823 8 0.18237875544254004 1.0597838077819084 9 0.13657337412300866 0.8928152370779805 >10 0.5432590816571196 6.4472557567642585 >50 0.02520644244657213 1.2655171805769871 >100 0.01647353201837943 2.0872799784302862 >500 4.0843418540071155E-4 0.20094517320327362 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.882350615917502E-5 9.882350615917502E-5 10 0.0 0.0 0.0 9.882350615917502E-5 9.882350615917502E-5 11 0.0 0.0 0.0 9.882350615917502E-5 9.882350615917502E-5 12 0.0 0.0 0.0 9.882350615917502E-5 9.882350615917502E-5 13 0.0 0.0 0.0 1.9764701231835005E-4 9.882350615917502E-5 14 0.0 0.0 0.0 1.9764701231835005E-4 2.964705184775251E-4 15 0.0 0.0 0.0 1.9764701231835005E-4 2.964705184775251E-4 16 0.0 0.0 0.0 1.9764701231835005E-4 2.964705184775251E-4 17 0.0 0.0 0.0 4.941175307958751E-4 2.964705184775251E-4 18 0.0 0.0 0.0 4.941175307958751E-4 2.964705184775251E-4 19 0.0 0.0 0.0 7.905880492734002E-4 2.964705184775251E-4 20 0.0 0.0 0.0 8.894115554325751E-4 2.964705184775251E-4 21 0.0 0.0 0.0 0.0012847055800692753 2.964705184775251E-4 22 0.0 0.0 0.0 0.0019764701231835004 2.964705184775251E-4 23 0.0 0.0 0.0 0.0027670581724569005 2.964705184775251E-4 24 0.0 0.0 9.882350615917502E-5 0.0033599992094119507 2.964705184775251E-4 25 0.0 0.0 9.882350615917502E-5 0.004348234271003701 2.964705184775251E-4 26 0.0 0.0 9.882350615917502E-5 0.006621174912664726 2.964705184775251E-4 27 0.0 0.0 9.882350615917502E-5 0.020159995256471705 2.964705184775251E-4 28 0.0 0.0 9.882350615917502E-5 0.06640939613896561 2.964705184775251E-4 29 0.0 0.0 9.882350615917502E-5 0.1381552616105267 2.964705184775251E-4 30 0.0 0.0 9.882350615917502E-5 0.22541641754907824 2.964705184775251E-4 31 0.0 0.0 9.882350615917502E-5 0.5920516253996175 2.964705184775251E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 640 0.0 20.523438 37 GTATATA 70 1.2190145E-4 18.5 1 TACTTAC 340 0.0 16.867645 31 TAATAGT 100 5.876391E-6 16.650002 4 TTACATA 170 8.54925E-11 16.323528 34 GCGCTAT 80 3.3820653E-4 16.1875 1 GTACTAG 70 0.0025922065 15.857142 1 GTACTTA 375 0.0 15.293332 30 TTTATAC 85 5.363365E-4 15.235293 3 TATGACT 110 1.4514475E-5 15.136364 4 TCTTATA 1080 0.0 15.074073 37 CTTACAT 185 3.0377123E-10 15.0 33 GTTCTAA 75 0.004103954 14.8 1 GATAAAG 100 1.0931583E-4 14.8 2 TATTAGG 75 0.004103954 14.8 2 CGTACAC 75 0.004103954 14.8 3 CGTAACA 165 1.6438207E-8 14.575757 14 TTATTGT 165 1.6438207E-8 14.575757 4 GGATAGA 115 2.209216E-5 14.478261 1 ACTTACA 320 0.0 14.453125 32 >>END_MODULE