##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727562.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3313570 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.722741333365526 34.0 31.0 34.0 31.0 34.0 2 32.8885030344915 34.0 31.0 34.0 31.0 34.0 3 32.97963555923068 34.0 31.0 34.0 31.0 34.0 4 36.39901405432811 37.0 37.0 37.0 35.0 37.0 5 36.277944030154785 37.0 37.0 37.0 35.0 37.0 6 36.29665557087974 37.0 37.0 37.0 35.0 37.0 7 36.27542831447653 37.0 37.0 37.0 35.0 37.0 8 36.26726672440902 37.0 37.0 37.0 35.0 37.0 9 37.98960728157244 39.0 38.0 39.0 35.0 39.0 10 37.99021780134417 39.0 38.0 39.0 35.0 39.0 11 38.05115630573671 39.0 38.0 39.0 35.0 39.0 12 38.03440549015111 39.0 38.0 39.0 35.0 39.0 13 38.05757355359929 39.0 38.0 39.0 35.0 39.0 14 39.46039498184737 40.0 39.0 41.0 37.0 41.0 15 39.480552998729465 40.0 39.0 41.0 37.0 41.0 16 39.47017386082081 40.0 39.0 41.0 37.0 41.0 17 39.48483056039257 40.0 39.0 41.0 37.0 41.0 18 39.463665774376274 40.0 39.0 41.0 37.0 41.0 19 39.50268079443018 41.0 39.0 41.0 37.0 41.0 20 39.478489967014426 41.0 39.0 41.0 37.0 41.0 21 39.461512205868594 41.0 39.0 41.0 37.0 41.0 22 39.429078607061264 40.0 39.0 41.0 37.0 41.0 23 39.392397021943104 40.0 39.0 41.0 37.0 41.0 24 39.35853716686233 41.0 39.0 41.0 36.0 41.0 25 39.30670666380973 40.0 39.0 41.0 36.0 41.0 26 39.21970925617989 40.0 39.0 41.0 36.0 41.0 27 39.18085508982759 40.0 39.0 41.0 36.0 41.0 28 39.12765627404884 40.0 39.0 41.0 36.0 41.0 29 39.057420244630414 40.0 39.0 41.0 36.0 41.0 30 38.99243293487085 40.0 39.0 41.0 35.0 41.0 31 38.92473646248608 40.0 38.0 41.0 35.0 41.0 32 38.84216479506997 40.0 38.0 41.0 35.0 41.0 33 38.79512489550545 40.0 38.0 41.0 35.0 41.0 34 38.75050051756867 40.0 38.0 41.0 35.0 41.0 35 38.72933271365929 40.0 38.0 41.0 35.0 41.0 36 38.67493368179939 40.0 38.0 41.0 35.0 41.0 37 38.64934375914799 40.0 38.0 41.0 35.0 41.0 38 38.600352489912694 40.0 38.0 41.0 35.0 41.0 39 38.56074988607454 40.0 38.0 41.0 35.0 41.0 40 38.501121147282234 40.0 38.0 41.0 35.0 41.0 41 38.453858527207814 40.0 38.0 41.0 35.0 41.0 42 38.404812935896935 40.0 38.0 41.0 34.0 41.0 43 37.387627543706635 39.0 37.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 2.0 10 6.0 11 0.0 12 0.0 13 3.0 14 1.0 15 1.0 16 11.0 17 12.0 18 16.0 19 52.0 20 112.0 21 265.0 22 502.0 23 912.0 24 1562.0 25 2764.0 26 4239.0 27 6573.0 28 9905.0 29 14639.0 30 20687.0 31 29035.0 32 39930.0 33 55081.0 34 80580.0 35 119368.0 36 186056.0 37 329667.0 38 783609.0 39 1627979.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.07761719233334 17.414933138578633 12.362436888310794 27.14501278077723 2 17.982689365246546 19.804863032922196 36.34023123096841 25.872216370862844 3 19.645759709316536 21.92064751914099 29.597714851353672 28.8358779201888 4 14.906641477319024 14.94186028965738 34.036914868253874 36.11458336476972 5 15.674785805038072 35.450978853623134 33.73600074843748 15.138234592901313 6 36.04722399104289 33.713245834553064 15.212323868214645 15.027206306189397 7 30.005039881457158 30.040922630274903 20.973300699849407 18.980736788418533 8 27.02001164906732 35.061670645255724 19.530446014419493 18.387871691257466 9 27.845073440428298 14.506227422387335 18.526061015762455 39.12263812142191 10 16.701412675754547 26.440877965457194 33.155509012937706 23.70220034585055 11 36.6905784395682 21.265764719019064 21.154464821929217 20.88919201948352 12 21.86714027468863 23.878143512887913 30.248432959013993 24.006283253409464 13 31.104397975597315 19.526764184851988 23.89733731292835 25.471500526622343 14 22.80890399176719 19.65490392537354 25.198773528248985 32.33741855461029 15 25.756963033827564 26.901076482464532 22.053042488916788 25.288917994791117 16 24.947594286524804 25.6513065968125 24.250611877823616 25.150487238839077 17 24.579049182603658 25.420015270539025 24.97671695482516 25.02421859203216 18 24.656126172074227 25.359053830159013 25.52410240314827 24.46071759461849 19 25.761520052390622 24.9352511037944 25.466762434473996 23.836466409340986 20 24.925292056603602 24.57690647851109 25.570366704189134 24.92743476069617 21 24.67055170103544 25.185072293628924 25.99619141892279 24.148184586412842 22 25.398527871751615 24.313776380157957 25.131172723075114 25.156523025015314 23 24.7185965589983 24.790905277389644 25.577820900116794 24.912677263495265 24 24.5377342262273 24.527201779349763 25.686193440911165 25.24887055351177 25 25.011573619992937 24.408870191364603 25.305938911808113 25.273617276834347 26 24.639648475813093 24.734832823812383 25.666456420114862 24.95906228025966 27 25.100390213576297 25.219596990557015 25.07875192013448 24.601260875732216 28 24.782304282088504 25.402571848489696 24.701575641981307 25.113548227440496 29 24.647826966081897 25.393095664192998 25.564511991598188 24.394565378126913 30 25.526033854724663 24.787676131785354 24.909508475752737 24.776781537737243 31 24.82745196268677 24.67308673122946 25.576613742881545 24.92284756320223 32 24.3557552730137 25.05038372510616 25.50825846443564 25.085602537444508 33 24.468654653440247 24.419553532896543 25.62314965430035 25.48864215936286 34 24.82718035230884 24.547904525934264 26.22211089549942 24.40280422625748 35 24.7413816518136 24.33511288429096 25.76212363100825 25.161381832887187 36 24.41879905962451 24.126365219385736 26.312074288456255 25.14276143253349 37 24.00190730843169 23.810452170921394 26.65892074107383 25.528719779573088 38 24.31030580310662 23.47736731078565 26.717920550946562 25.49440633516117 39 23.59382780505618 23.71306476096778 27.563534194237633 25.129573239738406 40 24.3113017078257 23.259777219132236 27.536342977513677 24.892578095528386 41 23.42331684557743 23.596211940595794 27.74409473769982 25.23637647612696 42 23.07149086936446 23.89957055381356 27.806625482485657 25.222313094336318 43 22.686256816666013 23.514940079732735 27.648336990013796 26.150466113587463 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 901.0 1 928.0 2 955.0 3 1654.5 4 2354.0 5 2354.0 6 2720.0 7 3086.0 8 2885.0 9 2684.0 10 3573.0 11 4462.0 12 4462.0 13 6651.0 14 8840.0 15 11182.0 16 13524.0 17 13075.5 18 12627.0 19 12627.0 20 14813.5 21 17000.0 22 17080.5 23 17161.0 24 21175.5 25 25190.0 26 25190.0 27 30493.5 28 35797.0 29 41600.5 30 47404.0 31 55977.0 32 64550.0 33 64550.0 34 75878.5 35 87207.0 36 99345.0 37 111483.0 38 127003.0 39 142523.0 40 142523.0 41 158757.5 42 174992.0 43 193318.0 44 211644.0 45 233623.0 46 255602.0 47 255602.0 48 274883.0 49 294164.0 50 304726.0 51 315288.0 52 311934.5 53 308581.0 54 308581.0 55 293766.5 56 278952.0 57 259186.5 58 239421.0 59 221239.0 60 203057.0 61 203057.0 62 177825.0 63 152593.0 64 128328.5 65 104064.0 66 86716.0 67 69368.0 68 69368.0 69 56540.0 70 43712.0 71 35161.0 72 26610.0 73 21528.0 74 16446.0 75 16446.0 76 13213.0 77 9980.0 78 7838.0 79 5696.0 80 4460.5 81 3225.0 82 3225.0 83 2317.0 84 1409.0 85 1031.5 86 654.0 87 444.5 88 235.0 89 235.0 90 158.0 91 81.0 92 54.0 93 27.0 94 19.0 95 11.0 96 11.0 97 9.0 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3313570.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.7577672985844 #Duplication Level Percentage of deduplicated Percentage of total 1 81.17459146905371 49.31986939034419 2 9.874643776588004 11.99922617468697 3 3.359724616867417 6.123880993768684 4 1.6321376707331012 3.966601631906213 5 0.9322974134781281 2.8322154650588116 6 0.6119149534152772 2.230715180767772 7 0.4346492584605993 1.848582295143595 8 0.30910518715563434 1.5024432825589926 9 0.25824183513945104 1.4121177593545944 >10 1.346033748213349 14.239361704134845 >50 0.05165936511876036 2.129049684629811 >100 0.014056712238659026 1.505606653922164 >500 6.458903161618929E-4 0.2826692923923434 >1k 1.9873548118548709E-4 0.2768432372576321 >5k 9.936774059274354E-5 0.33081725407331697 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5707 0.1722311585389776 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5252 0.15849974498803404 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4481 0.13523178927863302 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.03578617623892E-5 7 0.0 0.0 0.0 3.01789308811946E-5 9.053679264358381E-5 8 0.0 0.0 0.0 3.01789308811946E-5 1.207157235247784E-4 9 0.0 0.0 0.0 9.053679264358381E-5 1.50894654405973E-4 10 0.0 0.0 0.0 1.207157235247784E-4 1.50894654405973E-4 11 0.0 0.0 0.0 1.50894654405973E-4 1.50894654405973E-4 12 0.0 0.0 0.0 1.50894654405973E-4 1.50894654405973E-4 13 0.0 0.0 0.0 1.8107358528716763E-4 1.50894654405973E-4 14 0.0 0.0 0.0 1.8107358528716763E-4 1.50894654405973E-4 15 0.0 3.01789308811946E-5 0.0 1.8107358528716763E-4 1.50894654405973E-4 16 0.0 3.01789308811946E-5 0.0 2.1125251616836222E-4 2.1125251616836222E-4 17 0.0 3.01789308811946E-5 0.0 3.3196823969314064E-4 2.1125251616836222E-4 18 0.0 3.01789308811946E-5 0.0 5.130418249803082E-4 2.1125251616836222E-4 19 0.0 3.01789308811946E-5 0.0 6.639364793862813E-4 2.1125251616836222E-4 20 0.0 3.01789308811946E-5 0.0 8.450100646734489E-4 2.1125251616836222E-4 21 0.0 3.01789308811946E-5 0.0 0.0012373361661289788 2.1125251616836222E-4 22 0.0 3.01789308811946E-5 0.0 0.0018710937146340654 2.1125251616836222E-4 23 0.0 3.01789308811946E-5 0.0 0.002655745917545125 2.716103779307514E-4 24 0.0 3.01789308811946E-5 0.0 0.003923261014555299 3.01789308811946E-4 25 0.0 3.01789308811946E-5 0.0 0.0053718496968526395 3.01789308811946E-4 26 0.0 3.01789308811946E-5 0.0 0.008993321402595992 3.01789308811946E-4 27 0.0 3.01789308811946E-5 0.0 0.02713085886219395 3.01789308811946E-4 28 0.0 3.01789308811946E-5 0.0 0.08311277564680994 3.01789308811946E-4 29 0.0 3.01789308811946E-5 0.0 0.16206085883201501 3.01789308811946E-4 30 0.0 3.01789308811946E-5 0.0 0.26569530747803727 3.01789308811946E-4 31 0.0 3.01789308811946E-5 0.0 0.703289805255359 3.01789308811946E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2260 0.0 19.809734 1 CTTATAC 2675 0.0 18.188786 37 TACTTAC 1075 0.0 16.348839 31 GTACTTA 1170 0.0 15.495727 30 TCTTATA 4470 0.0 14.899328 37 TATACCG 155 1.2122473E-7 14.322581 5 AGTGTAC 1375 0.0 13.992727 27 GTATCAA 3200 0.0 13.875001 2 GTACTAT 300 0.0 13.566667 1 TACACCG 195 1.0279109E-8 13.28205 5 TACGCGT 85 0.009409617 13.058824 5 TCGTTAC 660 0.0 12.893939 23 TAGTACT 275 3.6379788E-12 12.781817 4 GTATAGG 430 0.0 12.476744 1 ACGGATG 1440 0.0 12.461805 28 TACGGAT 1340 0.0 12.425373 27 GTATTAG 315 0.0 12.333333 1 TATACTG 420 0.0 12.333333 5 ACTTACA 1160 0.0 12.280172 32 CTCTTAT 6755 0.0 12.214657 37 >>END_MODULE