##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727560.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 846146 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.482746476376416 31.0 31.0 34.0 30.0 34.0 2 31.67605590524567 31.0 31.0 34.0 30.0 34.0 3 31.76629919659255 31.0 31.0 34.0 30.0 34.0 4 35.54836044843325 37.0 35.0 37.0 33.0 37.0 5 34.88554930236626 37.0 35.0 37.0 32.0 37.0 6 34.84513901856181 36.0 35.0 37.0 32.0 37.0 7 34.82228717029921 35.0 35.0 37.0 32.0 37.0 8 34.752517886984045 35.0 35.0 37.0 32.0 37.0 9 36.38497138791651 38.0 35.0 39.0 32.0 39.0 10 36.14183604247967 37.0 35.0 39.0 32.0 39.0 11 36.30230362136085 38.0 35.0 39.0 32.0 39.0 12 36.225440999543814 37.0 35.0 39.0 32.0 39.0 13 36.33111543397948 38.0 35.0 39.0 32.0 39.0 14 37.36590139290382 39.0 36.0 40.0 32.0 41.0 15 37.318003039664546 39.0 36.0 40.0 32.0 41.0 16 37.28481136825087 39.0 36.0 40.0 32.0 41.0 17 37.27560019192905 39.0 36.0 40.0 32.0 41.0 18 37.21883457464787 39.0 36.0 40.0 32.0 41.0 19 37.26898667605827 39.0 36.0 40.0 32.0 41.0 20 37.22913067012076 39.0 36.0 40.0 32.0 41.0 21 37.18027858076502 39.0 36.0 40.0 32.0 41.0 22 37.16710591316392 39.0 36.0 40.0 32.0 41.0 23 37.085117698364115 39.0 36.0 40.0 31.0 41.0 24 37.005450595996436 39.0 36.0 40.0 31.0 41.0 25 36.906355404386474 38.0 36.0 40.0 31.0 41.0 26 36.71760547234165 38.0 36.0 40.0 31.0 41.0 27 36.61945456221503 38.0 36.0 40.0 30.0 41.0 28 36.48971335916024 38.0 35.0 40.0 30.0 41.0 29 36.357079038369264 38.0 35.0 40.0 30.0 41.0 30 36.27167651918227 38.0 35.0 40.0 30.0 41.0 31 36.17181195680178 38.0 35.0 40.0 30.0 41.0 32 36.03148392830552 38.0 35.0 40.0 29.0 41.0 33 35.959116984539314 38.0 35.0 40.0 29.0 41.0 34 35.884339109326284 38.0 35.0 40.0 29.0 41.0 35 35.87892869552063 38.0 35.0 40.0 29.0 41.0 36 35.793308719771765 38.0 34.0 40.0 29.0 41.0 37 35.760289595412615 38.0 34.0 40.0 29.0 41.0 38 35.72176905640398 38.0 34.0 40.0 29.0 41.0 39 35.648285284099906 38.0 34.0 40.0 28.0 41.0 40 35.57530024369317 38.0 34.0 40.0 28.0 41.0 41 35.51534959687808 38.0 34.0 40.0 28.0 41.0 42 35.47170819220324 38.0 34.0 40.0 28.0 41.0 43 34.24946522231388 37.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 5.0 15 9.0 16 18.0 17 27.0 18 70.0 19 144.0 20 285.0 21 548.0 22 871.0 23 1521.0 24 2455.0 25 3708.0 26 5533.0 27 7915.0 28 10958.0 29 14807.0 30 20004.0 31 26386.0 32 34797.0 33 46329.0 34 63910.0 35 88699.0 36 123371.0 37 162433.0 38 170509.0 39 60832.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.93207082465674 16.9572390580349 12.076639256109466 28.034050861198896 2 19.584208871754992 19.743519439907534 33.805631652220775 26.866640036116703 3 20.784947278602036 21.13193231428146 28.844431102906594 29.238689304209913 4 16.55281712612244 14.613080957659788 32.09339759332314 36.74070432289463 5 16.710473133478146 34.650875853576096 32.806749662587784 15.831901350357978 6 38.20309970146996 32.181089315555475 14.210904501114467 15.404906481860102 7 31.484164671345134 29.161161312586714 19.586927078778366 19.767746937289782 8 28.640447393239466 33.99436976597419 18.552117483271207 18.813065357515132 9 29.06094220146405 13.418488062343851 16.766964566398705 40.753605169793396 10 17.234141625676894 25.88808550770198 32.05226993923034 24.82550292739078 11 39.167590463111566 19.931312090348474 19.461416824046914 21.439680622493047 12 23.103341503712123 22.89333046542795 28.589037825623475 25.41429020523645 13 32.939350892162814 18.198750570232562 22.28374299470777 26.57815554289685 14 23.910767172568328 18.479907722780702 23.47597223174251 34.13335287290845 15 27.52680979405445 25.475508954719402 20.53026309880328 26.467418152422866 16 26.403126647174364 24.3759351223075 22.838729959132348 26.38220827138579 17 26.23057959264713 23.845293838179227 23.271515790419148 26.652610778754493 18 26.250670688037285 24.260352232357064 23.694728805667108 25.794248273938543 19 27.7982759476497 23.527736348100685 23.50575432608557 25.16823337816405 20 26.663601789762048 23.122723501617923 23.597818816138112 26.61585589248191 21 26.46245447003236 23.75039295818925 24.157060365468844 25.630092206309552 22 27.165051894117564 23.010095184518985 22.95041281291881 26.87444010844464 23 26.461154457977702 23.353298366948493 23.741883788376946 26.44366338669686 24 26.065123512963485 23.071904848572235 23.874130469209806 26.988841169254478 25 26.759448133064506 22.65885556393341 23.409789799869056 27.17190650313303 26 26.37830823522182 23.1539237909297 23.803338903688015 26.664429070160466 27 27.217170559217912 23.432480919368526 23.19505144502249 26.155297076391072 28 26.402299366775946 24.357734953542295 22.53239984588948 26.70756583379228 29 26.466590872024447 24.04100474386217 23.55231839422511 25.940085989888267 30 27.45779097224356 23.446190137399455 22.84404819026504 26.25197070009195 31 26.724820539245 23.351761989065718 23.657264821910168 26.266152649779116 32 26.27726184370073 23.494763315078014 23.55196384548293 26.676010995738324 33 26.216988557530264 23.00678606292531 23.639064653144963 27.13716072639946 34 26.587964724763815 23.331079979105258 24.385744304174455 25.69521099195647 35 26.57094638513921 22.879030332826723 23.955203948254795 26.59481933377928 36 26.083323681728686 22.868984785131644 24.442472102923134 26.605219430216536 37 25.59688280745876 22.643019053449404 25.028541173745428 26.731556965346403 38 26.151987954797402 22.150669033476493 24.697274465635953 27.000068546090155 39 24.974295216192004 22.676583001042374 25.86066707164012 26.488454711125502 40 26.258116211623054 21.67699191392502 25.852276084741877 26.212615789710046 41 25.09815091012662 22.052577214806902 26.150215211086504 26.699056663979974 42 24.606864536380247 22.046549886189855 26.546955253585082 26.79963032384482 43 24.26767957302877 21.57440914452116 26.274661819591415 27.883249462858657 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 10.5 2 10.0 3 27.0 4 44.0 5 44.0 6 56.5 7 69.0 8 57.5 9 46.0 10 82.0 11 118.0 12 118.0 13 191.0 14 264.0 15 376.0 16 488.0 17 505.5 18 523.0 19 523.0 20 654.5 21 786.0 22 970.0 23 1154.0 24 1643.5 25 2133.0 26 2133.0 27 2725.0 28 3317.0 29 4239.5 30 5162.0 31 6838.5 32 8515.0 33 8515.0 34 10643.0 35 12771.0 36 15628.5 37 18486.0 38 22252.0 39 26018.0 40 26018.0 41 30659.5 42 35301.0 43 41055.0 44 46809.0 45 54100.5 46 61392.0 47 61392.0 48 69224.5 49 77057.0 50 83169.0 51 89281.0 52 91009.5 53 92738.0 54 92738.0 55 88845.0 56 84952.0 57 79553.0 58 74154.0 59 69316.0 60 64478.0 61 64478.0 62 56802.0 63 49126.0 64 41204.5 65 33283.0 66 27887.5 67 22492.0 68 22492.0 69 18323.5 70 14155.0 71 11467.5 72 8780.0 73 7029.0 74 5278.0 75 5278.0 76 4228.0 77 3178.0 78 2553.0 79 1928.0 80 1475.5 81 1023.0 82 1023.0 83 748.5 84 474.0 85 349.0 86 224.0 87 153.0 88 82.0 89 82.0 90 55.0 91 28.0 92 21.5 93 15.0 94 8.5 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 846146.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 76.54567101473636 #Duplication Level Percentage of deduplicated Percentage of total 1 87.92002822055915 67.29897555777258 2 7.118555050209119 10.897891459471948 3 2.1362886445086335 4.905709433252248 4 0.98524192905381 3.0166401828510865 5 0.5540722659857891 2.120591669526886 6 0.33145499660303085 1.5222867075699695 7 0.23028772776356476 1.23392700536847 8 0.14522008447364193 0.8892775048681295 9 0.10857566829561881 0.747989764700542 >10 0.4450658062232598 5.428986180909998 >50 0.01747777977473239 0.9185797841744501 >100 0.007731826549616057 1.0191447495337491 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.1818291405974856E-4 0.0 4 0.0 0.0 0.0 1.1818291405974856E-4 1.1818291405974856E-4 5 0.0 0.0 0.0 1.1818291405974856E-4 1.1818291405974856E-4 6 0.0 0.0 0.0 1.1818291405974856E-4 1.1818291405974856E-4 7 0.0 0.0 0.0 1.1818291405974856E-4 1.1818291405974856E-4 8 0.0 0.0 0.0 1.1818291405974856E-4 1.1818291405974856E-4 9 0.0 0.0 0.0 1.1818291405974856E-4 2.3636582811949712E-4 10 0.0 0.0 0.0 1.1818291405974856E-4 2.3636582811949712E-4 11 0.0 0.0 0.0 1.1818291405974856E-4 2.3636582811949712E-4 12 0.0 0.0 0.0 1.1818291405974856E-4 2.3636582811949712E-4 13 0.0 0.0 0.0 1.1818291405974856E-4 2.3636582811949712E-4 14 0.0 0.0 0.0 1.1818291405974856E-4 2.3636582811949712E-4 15 0.0 0.0 0.0 1.1818291405974856E-4 3.545487421792457E-4 16 0.0 0.0 0.0 1.1818291405974856E-4 3.545487421792457E-4 17 0.0 0.0 0.0 2.3636582811949712E-4 3.545487421792457E-4 18 0.0 0.0 0.0 2.3636582811949712E-4 3.545487421792457E-4 19 0.0 0.0 0.0 2.3636582811949712E-4 3.545487421792457E-4 20 0.0 0.0 0.0 3.545487421792457E-4 3.545487421792457E-4 21 0.0 0.0 0.0 5.909145702987428E-4 4.7273165623899424E-4 22 1.1818291405974856E-4 0.0 0.0 0.001063646226537737 5.909145702987428E-4 23 1.1818291405974856E-4 0.0 0.0 0.0015363778827767313 8.272803984182399E-4 24 1.1818291405974856E-4 0.0 0.0 0.002363658281194971 8.272803984182399E-4 25 1.1818291405974856E-4 0.0 0.0 0.002718207023374217 8.272803984182399E-4 26 1.1818291405974856E-4 0.0 0.0 0.0034273045077327082 8.272803984182399E-4 27 1.1818291405974856E-4 0.0 0.0 0.011345559749735862 8.272803984182399E-4 28 1.1818291405974856E-4 0.0 0.0 0.04242766614744973 8.272803984182399E-4 29 1.1818291405974856E-4 0.0 0.0 0.09017356342758814 9.454633124779885E-4 30 1.1818291405974856E-4 0.0 0.0 0.1538741541057926 9.454633124779885E-4 31 1.1818291405974856E-4 0.0 0.0 0.4125765529825822 9.454633124779885E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGGT 45 1.3228091E-4 24.666666 3 GTCTTAC 70 1.9216714E-7 23.785713 1 TAATATA 50 2.7012863E-4 22.199999 4 CTTATAC 425 0.0 19.15294 37 ACTAGAC 60 9.234068E-4 18.5 3 AATATAG 50 0.0070333867 18.499998 5 CGTAGTC 50 0.0070333867 18.499998 14 TAATCAG 65 0.0015794686 17.076923 5 CTAGAAC 65 0.0015794686 17.076923 3 GTATTAT 65 0.0015794686 17.076923 1 GTATTAG 65 0.0015794686 17.076923 1 TACTTAC 165 5.4569682E-11 16.818182 31 GTTCTAG 100 5.8741043E-6 16.65 1 TCGTTAC 260 0.0 15.653846 23 ATAGGAC 120 1.9339332E-6 15.416667 3 ACTAATG 75 0.0041032154 14.8 3 CTACACT 225 1.8189894E-12 14.8 4 AGCCTAC 75 0.0041032154 14.8 1 ATTATGC 75 0.0041032154 14.8 3 CGTTACG 240 0.0 14.645834 24 >>END_MODULE