##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727556.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1751905 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.65253252887571 34.0 31.0 34.0 31.0 34.0 2 32.82611385891358 34.0 31.0 34.0 31.0 34.0 3 32.91841224267298 34.0 31.0 34.0 31.0 34.0 4 36.35637605920412 37.0 37.0 37.0 35.0 37.0 5 36.22437803419706 37.0 35.0 37.0 35.0 37.0 6 36.24164552301637 37.0 37.0 37.0 35.0 37.0 7 36.222567433736415 37.0 36.0 37.0 35.0 37.0 8 36.21137904167178 37.0 36.0 37.0 35.0 37.0 9 37.93368761433982 39.0 38.0 39.0 35.0 39.0 10 37.90794877576124 39.0 38.0 39.0 35.0 39.0 11 37.98493354377092 39.0 38.0 39.0 35.0 39.0 12 37.96509571009844 39.0 38.0 39.0 35.0 39.0 13 37.99375651076971 39.0 38.0 39.0 35.0 39.0 14 39.36656725107811 40.0 39.0 41.0 37.0 41.0 15 39.39233291759542 40.0 39.0 41.0 37.0 41.0 16 39.37295458372457 40.0 39.0 41.0 37.0 41.0 17 39.391940202236995 40.0 39.0 41.0 37.0 41.0 18 39.3655243863109 40.0 39.0 41.0 36.0 41.0 19 39.40670470145356 40.0 39.0 41.0 37.0 41.0 20 39.380538328276934 40.0 39.0 41.0 37.0 41.0 21 39.365894840188254 40.0 39.0 41.0 37.0 41.0 22 39.33856744515256 40.0 39.0 41.0 36.0 41.0 23 39.29999286490991 40.0 39.0 41.0 36.0 41.0 24 39.26641570176465 40.0 39.0 41.0 36.0 41.0 25 39.20608023836909 40.0 39.0 41.0 36.0 41.0 26 39.11854923640266 40.0 39.0 41.0 36.0 41.0 27 39.080814313561525 40.0 39.0 41.0 36.0 41.0 28 39.01543805172084 40.0 39.0 41.0 36.0 41.0 29 38.94742979784863 40.0 38.0 41.0 35.0 41.0 30 38.899829614048706 40.0 38.0 41.0 35.0 41.0 31 38.833979582226206 40.0 38.0 41.0 35.0 41.0 32 38.75536401802609 40.0 38.0 41.0 35.0 41.0 33 38.713929122869104 40.0 38.0 41.0 35.0 41.0 34 38.68038963299951 40.0 38.0 41.0 35.0 41.0 35 38.677624072081535 40.0 38.0 41.0 35.0 41.0 36 38.61930869539159 40.0 38.0 41.0 35.0 41.0 37 38.61030820735142 40.0 38.0 41.0 35.0 41.0 38 38.5778412642238 40.0 38.0 41.0 35.0 41.0 39 38.53466026982057 40.0 38.0 41.0 35.0 41.0 40 38.48911442115868 40.0 38.0 41.0 35.0 41.0 41 38.445532149288915 40.0 38.0 41.0 34.0 41.0 42 38.418161943712704 40.0 38.0 41.0 34.0 41.0 43 37.36656097219883 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 0.0 16 2.0 17 7.0 18 12.0 19 27.0 20 47.0 21 123.0 22 274.0 23 494.0 24 883.0 25 1459.0 26 2296.0 27 3573.0 28 5352.0 29 7868.0 30 11167.0 31 15858.0 32 22127.0 33 30800.0 34 44960.0 35 66958.0 36 104024.0 37 181590.0 38 444060.0 39 807942.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.908491042607906 16.82596944469021 12.291933637954113 27.973605874747776 2 18.128836894694633 19.360924251029594 36.23113125426322 26.27910760001256 3 19.72230229378876 21.19806724679706 29.751955728193025 29.327674731221155 4 15.312188731694926 14.586464448700129 33.405635579554826 36.695711240050116 5 15.895154132216074 35.362362685191265 33.45586661377187 15.286616568820799 6 36.78926654127935 33.013947674103335 14.978437757755128 15.218348026862188 7 30.54286619422857 30.20894397812667 20.199725441733428 19.048464385911338 8 27.6749595440392 35.24146571874616 19.010163222320845 18.073411514893785 9 29.015100704661496 14.105159811747784 17.475776369152438 39.403963114438284 10 16.774425553897043 26.497213033811768 32.42270556908052 24.305655843210676 11 37.851652914969705 20.990921311372475 20.16553409003342 20.9918916836244 12 22.332147005688093 23.187330363233166 29.57877282158565 24.901749809493097 13 31.7637086485854 19.076890584820525 23.08292972507071 26.07647104152337 14 23.112782941997427 19.002856890071094 24.57673218582058 33.3076279821109 15 26.672679169247193 26.279050519291857 21.24156275597136 25.806707555489595 16 25.326658694392673 25.4585722399331 23.603391736424065 25.611377329250157 17 25.249085994959774 24.749972173148656 24.057811353926155 25.943130477965415 18 25.3763760021234 25.26660977621503 24.58900454077133 24.76800968089023 19 26.859789771705657 24.52279090475796 24.359825447156098 24.257593876380284 20 25.6278165768121 23.940282150002425 24.503155136836757 25.928746136348717 21 25.26381282090068 24.87263864193549 25.29691963890736 24.56662889825647 22 26.295375605412396 23.625082410290513 23.840562130937464 26.238979853359627 23 25.397552949503538 24.276715917815178 24.865046906082235 25.460684226599046 24 24.957917238663054 23.667493385771486 25.06323116835673 26.311358207208723 25 25.650363461489068 23.531812512664786 24.414851261912034 26.40297276393412 26 25.269178408646585 24.02858602492715 24.951124632899617 25.751110933526643 27 25.942160105713498 24.481921108735918 24.229224758191798 25.34669402735879 28 25.28156492503874 25.411708968237434 23.29898025292467 26.007745853799154 29 25.31392969367631 25.105356740234203 24.647341037327937 24.93337252876155 30 26.85859107657093 24.096626244002955 23.517827736092997 25.526954943333113 31 25.566112317734124 24.271578652952073 24.78387812124516 25.378430908068644 32 25.16472068976343 24.57593305573076 24.44282081505561 25.8165254394502 33 24.991594863876752 23.751915771688534 24.668517984708075 26.58797137972664 34 25.57090709827302 24.035207388528487 25.55749312890824 24.836392384290242 35 25.484886452176347 23.63986631695212 24.844212443026308 26.03103478784523 36 25.17094248831986 23.428838892519856 25.682671149405934 25.717547469754354 37 24.326090741221698 23.335797317776937 26.21717501805178 26.12093692294959 38 25.37283699743993 22.56183982578964 25.78079290829126 26.284530268479166 39 23.953924442250006 23.208735633496108 27.135033006926747 25.70230691732714 40 25.404802201032588 22.11078797080892 26.941072717984138 25.543337110174352 41 24.078132090495775 22.968597041506246 27.087427685861957 25.865843182136018 42 23.620401791193014 22.93880090530023 27.53157277363784 25.90922452986891 43 23.07436761696553 22.683992568090165 27.01476392840936 27.226875886534945 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 73.5 2 103.0 3 183.0 4 263.0 5 263.0 6 327.5 7 392.0 8 380.0 9 368.0 10 512.0 11 656.0 12 656.0 13 1131.5 14 1607.0 15 2244.0 16 2881.0 17 2792.5 18 2704.0 19 2704.0 20 3323.0 21 3942.0 22 4316.0 23 4690.0 24 6222.0 25 7754.0 26 7754.0 27 10004.5 28 12255.0 29 14901.5 30 17548.0 31 22541.0 32 27534.0 33 27534.0 34 33940.5 35 40347.0 36 46583.5 37 52820.0 38 60449.0 39 68078.0 40 68078.0 41 77229.5 42 86381.0 43 97693.0 44 109005.0 45 122940.0 46 136875.0 47 136875.0 48 150438.5 49 164002.0 50 173355.5 51 182709.0 52 180691.5 53 178674.0 54 178674.0 55 168765.0 56 158856.0 57 147449.5 58 136043.0 59 125698.5 60 115354.0 61 115354.0 62 100444.0 63 85534.0 64 71969.5 65 58405.0 66 48181.5 67 37958.0 68 37958.0 69 30956.0 70 23954.0 71 19247.0 72 14540.0 73 11700.0 74 8860.0 75 8860.0 76 7041.5 77 5223.0 78 4091.5 79 2960.0 80 2230.0 81 1500.0 82 1500.0 83 1073.0 84 646.0 85 465.0 86 284.0 87 194.0 88 104.0 89 104.0 90 72.5 91 41.0 92 25.0 93 9.0 94 5.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1751905.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.12483290417819 #Duplication Level Percentage of deduplicated Percentage of total 1 84.11704374241125 57.30459549345214 2 8.994373408233464 12.254803710273766 3 2.815955099000008 5.755094117551323 4 1.3257909849416094 3.6127715726005185 5 0.7525939528739706 2.56351686421171 6 0.4560900703026686 1.8642635897174507 7 0.31647827381355065 1.5092020664945622 8 0.2273714666843747 1.2391714540040755 9 0.17304925878394983 1.0610056654963622 >10 0.7752977143641682 8.664600209242888 >50 0.028576424080627064 1.3325652044416354 >100 0.016036514441260877 2.1116316968540145 >500 0.0010073175518345993 0.4668674557875438 >1k 3.357725172781996E-4 0.2599108998719238 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.708072070117957E-5 0.0 2 0.0 0.0 0.0 1.1416144140235914E-4 0.0 3 0.0 0.0 0.0 1.1416144140235914E-4 0.0 4 0.0 0.0 0.0 1.1416144140235914E-4 1.1416144140235914E-4 5 0.0 0.0 0.0 1.712421621035387E-4 1.1416144140235914E-4 6 0.0 0.0 0.0 1.712421621035387E-4 2.2832288280471828E-4 7 0.0 0.0 0.0 1.712421621035387E-4 2.2832288280471828E-4 8 0.0 0.0 0.0 2.2832288280471828E-4 2.2832288280471828E-4 9 0.0 0.0 0.0 2.2832288280471828E-4 2.8540360350589786E-4 10 0.0 0.0 0.0 2.8540360350589786E-4 2.8540360350589786E-4 11 0.0 0.0 0.0 3.424843242070774E-4 2.8540360350589786E-4 12 0.0 0.0 0.0 3.424843242070774E-4 2.8540360350589786E-4 13 0.0 0.0 0.0 3.424843242070774E-4 2.8540360350589786E-4 14 0.0 0.0 0.0 3.424843242070774E-4 3.424843242070774E-4 15 0.0 0.0 0.0 3.424843242070774E-4 5.137264863106162E-4 16 0.0 0.0 0.0 4.5664576560943657E-4 5.137264863106162E-4 17 0.0 0.0 0.0 6.849686484141548E-4 5.137264863106162E-4 18 0.0 0.0 0.0 6.849686484141548E-4 5.137264863106162E-4 19 0.0 0.0 0.0 7.420493691153345E-4 5.137264863106162E-4 20 0.0 0.0 0.0 0.0011416144140235914 5.137264863106162E-4 21 0.0 0.0 0.0 0.001484098738230669 5.137264863106162E-4 22 0.0 0.0 0.0 0.0019407445038401054 5.137264863106162E-4 23 0.0 0.0 0.0 0.0022261481073460035 5.708072070117957E-4 24 0.0 0.0 0.0 0.002511551710851901 5.708072070117957E-4 25 0.0 0.0 0.0 0.0030252781971625174 5.708072070117957E-4 26 0.0 0.0 0.0 0.004851861259600264 5.708072070117957E-4 27 0.0 0.0 0.0 0.015411794589318484 6.278879277129753E-4 28 0.0 0.0 0.0 0.054397926828224134 6.278879277129753E-4 29 0.0 0.0 0.0 0.11490349077147448 6.278879277129753E-4 30 0.0 0.0 0.0 0.1933894817355964 6.278879277129753E-4 31 0.0 0.0 0.0 0.6063684960086306 6.278879277129753E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1295 0.0 21.571428 37 GGTATCA 1080 0.0 20.555555 1 TACTTAC 715 0.0 18.111889 31 TAGACTA 65 0.0015803812 17.076923 5 CGTTACG 600 0.0 16.958332 24 GTACTTA 790 0.0 16.626581 30 TCTTATA 2295 0.0 16.122005 37 TCGTTAC 700 0.0 16.121428 23 CTCGTTA 735 0.0 15.857143 22 GCTTATA 385 0.0 15.857142 1 AGTGTAC 965 0.0 15.528497 27 ACTTACA 605 0.0 15.289256 32 ATCTCGT 875 0.0 15.011429 20 GTGTACT 985 0.0 14.8375635 28 ATTATAC 165 1.6465492E-8 14.575757 3 GTAGTAA 90 8.277066E-4 14.388889 1 CTTATAG 425 0.0 14.364706 2 TACGGAT 1170 0.0 14.230768 27 GATCTCG 925 0.0 14.2 19 TGTACCG 185 4.9021764E-9 14.0 5 >>END_MODULE