##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727553.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1501302 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57880293238802 34.0 31.0 34.0 31.0 34.0 2 32.76473620897061 34.0 31.0 34.0 31.0 34.0 3 32.86145425770431 34.0 31.0 34.0 31.0 34.0 4 36.31898112438404 37.0 37.0 37.0 35.0 37.0 5 36.16906791571583 37.0 35.0 37.0 35.0 37.0 6 36.186334927949204 37.0 36.0 37.0 35.0 37.0 7 36.163913056800034 37.0 36.0 37.0 35.0 37.0 8 36.15125537699943 37.0 35.0 37.0 35.0 37.0 9 37.86671835513441 39.0 38.0 39.0 35.0 39.0 10 37.84503051351427 39.0 38.0 39.0 35.0 39.0 11 37.91752358952429 39.0 38.0 39.0 35.0 39.0 12 37.89759488763753 39.0 38.0 39.0 35.0 39.0 13 37.928356852918334 39.0 38.0 39.0 35.0 39.0 14 39.28648799508693 40.0 39.0 41.0 36.0 41.0 15 39.29751908676602 40.0 39.0 41.0 36.0 41.0 16 39.280715006041426 40.0 39.0 41.0 36.0 41.0 17 39.29093147148275 40.0 39.0 41.0 36.0 41.0 18 39.27195327788812 40.0 39.0 41.0 36.0 41.0 19 39.30189262386915 40.0 39.0 41.0 36.0 41.0 20 39.28574464031887 40.0 39.0 41.0 36.0 41.0 21 39.26081094942923 40.0 39.0 41.0 36.0 41.0 22 39.23219778565539 40.0 39.0 41.0 36.0 41.0 23 39.19423273931561 40.0 39.0 41.0 36.0 41.0 24 39.15615645619602 40.0 39.0 41.0 36.0 41.0 25 39.10167707762995 40.0 39.0 41.0 36.0 41.0 26 39.010337693548664 40.0 39.0 41.0 36.0 41.0 27 38.96829818384309 40.0 38.0 41.0 36.0 41.0 28 38.908790503176576 40.0 38.0 41.0 35.0 41.0 29 38.828191796187575 40.0 38.0 41.0 35.0 41.0 30 38.768429669713356 40.0 38.0 41.0 35.0 41.0 31 38.71749854459662 40.0 38.0 41.0 35.0 41.0 32 38.63700974221043 40.0 38.0 41.0 35.0 41.0 33 38.597553989803515 40.0 38.0 41.0 35.0 41.0 34 38.55682600835808 40.0 38.0 41.0 35.0 41.0 35 38.54894684746973 40.0 38.0 41.0 35.0 41.0 36 38.49977885861739 40.0 38.0 41.0 35.0 41.0 37 38.47998071007699 40.0 38.0 41.0 34.0 41.0 38 38.44618937428978 40.0 38.0 41.0 34.0 41.0 39 38.408087779807126 40.0 38.0 41.0 34.0 41.0 40 38.35104795703995 40.0 38.0 41.0 34.0 41.0 41 38.310718962607126 40.0 38.0 41.0 34.0 41.0 42 38.2669309705842 40.0 38.0 41.0 34.0 41.0 43 37.20215852639909 39.0 36.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 2.0 13 0.0 14 1.0 15 3.0 16 2.0 17 9.0 18 8.0 19 34.0 20 54.0 21 117.0 22 300.0 23 528.0 24 872.0 25 1424.0 26 2199.0 27 3440.0 28 4989.0 29 7367.0 30 10429.0 31 14640.0 32 20281.0 33 28201.0 34 40950.0 35 60588.0 36 94650.0 37 167440.0 38 401367.0 39 641404.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.504971018489286 16.573947147209555 12.009642297152737 27.911439537148418 2 18.45085132771421 19.325825183740513 35.09280611096235 27.130517377582926 3 20.20279730527236 21.00643308275084 28.952535865535385 29.83823374644142 4 15.575014220989514 14.139660108359278 32.72739262320306 37.55793304744815 5 16.61944099188571 34.47047962368664 32.92002541793723 15.99005396649042 6 37.79546020720681 32.140235608824874 14.459449198096053 15.604854985872263 7 31.264262620045802 29.097343505836932 20.06911334295165 19.569280531165614 8 28.25580729260335 33.998689137828364 18.916380581655122 18.82912298791316 9 28.483010080583387 14.001779788476934 17.31730191527088 40.1979082156688 10 17.303247447881905 25.691832822443452 32.13850377872007 24.866415950954572 11 38.12177696426169 20.321294449750948 19.906121486549676 21.65080709943769 12 22.919439260055604 22.94355166382247 28.963592934666043 25.173416141455885 13 32.57059538986826 18.265212462249433 22.819392767078174 26.34479938080413 14 23.78368909120217 18.508201547723242 23.96639716725882 33.74171219381577 15 27.350526409743008 25.494470799346168 20.8816080975047 26.27339469340612 16 26.247417241834086 24.37104593213091 23.215182554875703 26.1663542711593 17 25.887729450836673 24.29897515623106 23.81466220653806 25.99863318639421 18 25.99810031559273 24.137315476832775 24.35958920989914 25.50499499767535 19 27.022544431433516 24.147839675161958 23.94461607324842 24.884999820156104 20 26.20611975471957 23.42333521170291 23.967462908861776 26.40308212471575 21 25.831111928179673 24.47448947646776 24.244289290229414 25.450109305123153 22 26.718674856890885 23.48907814683521 23.192069283861606 26.600177712412293 23 26.004627982910833 23.63468509333898 23.76304034764491 26.597646576105273 24 25.76963195945919 23.564612582944672 24.001300204755605 26.664455252840536 25 26.434388284302557 22.968263547240994 23.536636865867095 27.06071130258935 26 25.903049486379153 23.496671555756272 24.241291891971102 26.35898706589347 27 26.73033140567321 23.74492274039467 23.707888219691974 25.816857634240147 28 26.27599243856333 24.334477673379507 23.1076092618274 26.281920626229766 29 26.073368316301448 24.155100039832092 24.11473507662016 25.6567965672463 30 26.727267398564713 23.73446515091567 23.60877425061713 25.92949319990249 31 26.208850717577143 23.50359887617548 23.981583985100933 26.305966421146444 32 25.65299986278577 23.66679055912801 23.89832292237005 26.78188665571617 33 25.817257287341256 23.409680397415045 23.967063255760667 26.80599905948304 34 26.35559001453405 23.542698271233903 24.564278206516743 25.537433507715303 35 26.128120791153282 23.232500855923725 24.288784002152795 26.350594350770194 36 25.6027767897465 23.132454362946294 24.846832949000266 26.417935898306936 37 24.98924267069517 22.747921470829986 25.4037495453946 26.859086313080244 38 25.595982687027657 22.279394818630763 25.289848411578745 26.83477408276283 39 24.648338575449845 22.44098788917886 26.275392958911663 26.635280576459635 40 25.61196881107199 21.87427979180738 26.483545615738873 26.03020578138176 41 24.818923840772875 22.03081058974144 26.730531232223765 26.419734337261925 42 24.090689281703483 22.144178852755807 27.26939683021804 26.49573503532267 43 23.803605137407395 21.69217119540239 27.044059090043177 27.460164577147033 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 26.0 2 30.0 3 88.5 4 147.0 5 147.0 6 183.0 7 219.0 8 201.5 9 184.0 10 244.5 11 305.0 12 305.0 13 565.5 14 826.0 15 1123.0 16 1420.0 17 1425.5 18 1431.0 19 1431.0 20 1738.5 21 2046.0 22 2334.5 23 2623.0 24 3633.0 25 4643.0 26 4643.0 27 5991.0 28 7339.0 29 9232.0 30 11125.0 31 14677.5 32 18230.0 33 18230.0 34 22714.5 35 27199.0 36 32481.0 37 37763.0 38 44765.0 39 51767.0 40 51767.0 41 59752.0 42 67737.0 43 77420.5 44 87104.0 45 98679.0 46 110254.0 47 110254.0 48 122984.5 49 135715.0 50 145585.5 51 155456.0 52 159140.0 53 162824.0 54 162824.0 55 154570.0 56 146316.0 57 134578.0 58 122840.0 59 115163.0 60 107486.0 61 107486.0 62 94473.5 63 81461.0 64 68967.0 65 56473.0 66 47217.0 67 37961.0 68 37961.0 69 31242.5 70 24524.0 71 20110.0 72 15696.0 73 12579.5 74 9463.0 75 9463.0 76 7648.5 77 5834.0 78 4629.0 79 3424.0 80 2698.5 81 1973.0 82 1973.0 83 1395.0 84 817.0 85 611.5 86 406.0 87 275.5 88 145.0 89 145.0 90 99.0 91 53.0 92 36.0 93 19.0 94 10.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1501302.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.90366030373265 #Duplication Level Percentage of deduplicated Percentage of total 1 83.41282496042808 54.97210481166764 2 8.963913779411989 11.815094574206322 3 2.9688095884968115 5.869662558802745 4 1.4203033448234101 3.744127566619891 5 0.8293330849190532 2.7328042953575973 6 0.5189444921437 2.0520204916038876 7 0.3957945335411418 1.8259015941998813 8 0.2717604398432724 1.4328006169139198 9 0.20536374257246345 1.2180800096278948 >10 0.967148526798238 10.492792709544325 >50 0.030545845061195148 1.3632748199161158 >100 0.014045197578005762 1.7509299783750498 >500 9.09348287000699E-4 0.4598581138368053 >1k 3.031160956668996E-4 0.270547859327967 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 1562 0.1040430239885113 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.660885018470634E-5 0.0 3 0.0 0.0 0.0 6.660885018470634E-5 0.0 4 0.0 0.0 0.0 6.660885018470634E-5 0.0 5 0.0 0.0 0.0 6.660885018470634E-5 0.0 6 0.0 0.0 0.0 6.660885018470634E-5 0.0 7 0.0 0.0 0.0 6.660885018470634E-5 0.0 8 0.0 0.0 0.0 6.660885018470634E-5 0.0 9 0.0 0.0 0.0 6.660885018470634E-5 6.660885018470634E-5 10 0.0 0.0 0.0 1.99826550554119E-4 6.660885018470634E-5 11 0.0 0.0 0.0 1.99826550554119E-4 6.660885018470634E-5 12 0.0 0.0 0.0 1.99826550554119E-4 6.660885018470634E-5 13 0.0 0.0 0.0 1.99826550554119E-4 6.660885018470634E-5 14 6.660885018470634E-5 0.0 0.0 2.6643540073882535E-4 1.99826550554119E-4 15 6.660885018470634E-5 0.0 0.0 2.6643540073882535E-4 3.330442509235317E-4 16 6.660885018470634E-5 0.0 0.0 2.6643540073882535E-4 3.330442509235317E-4 17 6.660885018470634E-5 0.0 0.0 3.99653101108238E-4 3.330442509235317E-4 18 6.660885018470634E-5 0.0 0.0 5.328708014776507E-4 3.330442509235317E-4 19 6.660885018470634E-5 0.0 0.0 7.326973520317698E-4 3.330442509235317E-4 20 6.660885018470634E-5 0.0 0.0 9.325239025858888E-4 3.99653101108238E-4 21 6.660885018470634E-5 0.0 0.0 0.0013321770036941267 3.99653101108238E-4 22 6.660885018470634E-5 0.0 0.0 0.0017318301048023649 3.99653101108238E-4 23 6.660885018470634E-5 0.0 0.0 0.0023979186066494284 4.662619512929444E-4 24 6.660885018470634E-5 0.0 0.0 0.0037300956103435553 5.328708014776507E-4 25 6.660885018470634E-5 0.0 0.0 0.0046626195129294435 5.328708014776507E-4 26 6.660885018470634E-5 0.0 0.0 0.006993929269394166 5.328708014776507E-4 27 6.660885018470634E-5 0.0 0.0 0.018650478051717774 5.328708014776507E-4 28 6.660885018470634E-5 0.0 0.0 0.05628447840607686 5.994796516623571E-4 29 1.3321770036941267E-4 0.0 0.0 0.11683192322397493 5.994796516623571E-4 30 1.3321770036941267E-4 0.0 0.0 0.19463106023971194 5.994796516623571E-4 31 1.3321770036941267E-4 0.0 0.0 0.5719035876858887 5.994796516623571E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 950 0.0 20.447369 37 TATACCG 75 9.26887E-6 19.733334 5 CTATACT 140 9.458745E-11 18.5 4 CTAGAGT 135 1.1532393E-9 17.814816 4 CGACTTA 140 1.869921E-9 17.178572 19 TCTTATA 1650 0.0 16.369698 37 TAGTACA 125 1.6585909E-7 16.279999 4 TACTATA 105 9.346826E-6 15.857144 2 ACGGACT 85 5.36551E-4 15.235294 30 GTATTAA 135 3.9742008E-7 15.074075 1 GTATAGA 135 3.9742008E-7 15.074075 1 TAGTACT 135 3.9742008E-7 15.074075 4 ATATGTA 265 0.0 14.6603775 1 CTAATAC 115 2.2106253E-5 14.478261 3 CTATAAT 90 8.2760985E-4 14.388887 1 TACGGAC 90 8.2760985E-4 14.388887 29 TATAGCA 220 1.8189894E-11 14.295454 4 TATAGTA 130 4.4458575E-6 14.230769 2 TTATAGC 250 0.0 14.059999 3 TAATACC 120 3.301681E-5 13.875001 4 >>END_MODULE