##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727549.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2596397 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10589405241186 33.0 31.0 34.0 30.0 34.0 2 32.29546637128298 34.0 31.0 34.0 30.0 34.0 3 32.3932337774231 34.0 31.0 34.0 30.0 34.0 4 35.99794176314331 37.0 35.0 37.0 35.0 37.0 5 35.71055659053681 37.0 35.0 37.0 33.0 37.0 6 35.71201129873436 37.0 35.0 37.0 33.0 37.0 7 35.68639233522455 37.0 35.0 37.0 33.0 37.0 8 35.65502656180854 37.0 35.0 37.0 33.0 37.0 9 37.31184714818266 39.0 37.0 39.0 34.0 39.0 10 37.21367957211474 39.0 37.0 39.0 34.0 39.0 11 37.30653671222082 39.0 37.0 39.0 34.0 39.0 12 37.26759043397446 39.0 37.0 39.0 34.0 39.0 13 37.318059988514854 39.0 37.0 39.0 34.0 39.0 14 38.545984685700994 40.0 38.0 41.0 35.0 41.0 15 38.53616376848379 40.0 38.0 41.0 34.0 41.0 16 38.51874501472618 40.0 38.0 41.0 34.0 41.0 17 38.524897001498616 40.0 38.0 41.0 34.0 41.0 18 38.490274792337225 40.0 38.0 41.0 34.0 41.0 19 38.5335435990721 40.0 38.0 41.0 34.0 41.0 20 38.5165196231547 40.0 38.0 41.0 34.0 41.0 21 38.48338447471631 40.0 38.0 41.0 34.0 41.0 22 38.45545192048828 40.0 38.0 41.0 34.0 41.0 23 38.4041350379006 40.0 38.0 41.0 34.0 41.0 24 38.35478973361932 40.0 38.0 41.0 34.0 41.0 25 38.282111710959455 40.0 38.0 41.0 34.0 41.0 26 38.15876770771188 40.0 38.0 41.0 34.0 41.0 27 38.095560116576934 40.0 38.0 41.0 34.0 41.0 28 38.01608883387248 40.0 38.0 41.0 33.0 41.0 29 37.92162369622211 40.0 37.0 41.0 33.0 41.0 30 37.842896521602825 40.0 37.0 41.0 33.0 41.0 31 37.77083242662813 40.0 37.0 41.0 33.0 41.0 32 37.66597211443396 40.0 37.0 41.0 33.0 41.0 33 37.61406325766052 39.0 37.0 41.0 33.0 41.0 34 37.55699032158795 39.0 37.0 41.0 33.0 41.0 35 37.533897165957285 39.0 37.0 41.0 33.0 41.0 36 37.482972365166034 39.0 37.0 40.0 32.0 41.0 37 37.44919401770993 39.0 37.0 40.0 32.0 41.0 38 37.40312825812077 39.0 37.0 40.0 32.0 41.0 39 37.359919919796546 39.0 37.0 40.0 32.0 41.0 40 37.28973689308684 39.0 36.0 40.0 32.0 41.0 41 37.24685477606083 39.0 36.0 40.0 32.0 41.0 42 37.19383014230875 39.0 36.0 40.0 31.0 41.0 43 36.10340945548774 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 1.0 13 2.0 14 5.0 15 10.0 16 18.0 17 41.0 18 47.0 19 141.0 20 286.0 21 635.0 22 1147.0 23 1952.0 24 3251.0 25 5093.0 26 7875.0 27 11780.0 28 16904.0 29 23766.0 30 32818.0 31 43869.0 32 58137.0 33 78840.0 34 109532.0 35 156857.0 36 241647.0 37 421071.0 38 800258.0 39 580406.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.032440724588724 17.770009748124036 12.153457271750044 27.044092255537194 2 18.299397203124176 20.310838442657268 35.54005801115931 25.849706343059246 3 20.17603625331565 22.32312701023765 29.372896363691687 28.127940372755013 4 15.112519387443445 15.112557902354688 34.21965130910258 35.55527140109929 5 15.765578222436707 35.57880401186721 33.662918267121704 14.992699498574371 6 36.20313072307509 33.97319439207486 14.983109285675495 14.84056559917455 7 30.171849682463815 29.964639459990135 20.75838171127143 19.105129146274628 8 27.280727870198586 34.95667265060005 19.38605690886255 18.37654257033882 9 28.03504240684302 14.308058436363929 18.017275478287797 39.63962367850525 10 16.30012667554307 26.695917457923425 33.33492528299794 23.66903058353557 11 37.23217212159774 20.99351524439444 20.7146672870135 21.059645346994316 12 22.100934487291426 23.971988875353038 30.026532922353553 23.90054371500198 13 31.57918453919027 19.276096837271034 23.540775929104832 25.60394269443386 14 22.89195373434802 19.487505185069924 25.02910764416998 32.591433436412075 15 26.13956956505496 26.76913430419154 21.78045191085955 25.31084421989395 16 25.231464987827362 25.384061066162072 24.118923261735397 25.265550684275173 17 24.942680183346383 25.164025378245313 24.891686440864014 25.00160799754429 18 24.88078672098296 25.197687410669477 25.365804998234093 24.55572087011347 19 25.774255631939187 25.07678910428567 25.062076408191814 24.086878855583333 20 25.139452864873903 24.662984897918154 25.095969530083416 25.101592707124524 21 24.993866500384957 25.190177002977588 25.242210648063452 24.573745848574006 22 25.463093664027497 24.693219103241915 24.441909307397903 25.40177792533268 23 25.04204865434677 24.72626489708623 24.81115176146021 25.420534687106787 24 24.653856863954164 24.757577519924727 25.00850216665633 25.58006344946478 25 25.267977123683323 24.329599826220722 24.72433915152421 25.678083898571753 26 24.89992863186947 24.70203901791598 25.076596529729468 25.32143582048508 27 25.61611340638585 25.009465039437345 24.617421757920688 24.756999796256117 28 25.084838720734925 25.436133226159175 24.280377769655413 25.19865028345049 29 25.105444198248573 25.32332305113586 24.924308570684683 24.64692417993088 30 25.576558592541897 24.99078530748572 24.627243060287004 24.80541303968538 31 25.149851890908824 24.66421737507785 24.98408371292988 25.201847021083445 32 24.745984531641348 24.92738976358392 24.97437795529728 25.352247749477446 33 25.011968508667977 24.445183074853343 24.948611479677414 25.594236936801266 34 25.270673167470154 24.700498421466364 25.468062087577515 24.560766323485968 35 25.16830053339301 24.545822537924668 25.1463085190747 25.13956840960762 36 24.80294808536599 24.40562826100939 25.501223426155555 25.290200227469068 37 24.34369628373473 24.120040194161373 25.91760813157618 25.618655390527717 38 24.73951402655295 23.749680807673094 25.950769470154217 25.56003569561974 39 24.083836177595337 23.90986432352217 26.66564473768842 25.34065476119407 40 24.753726028800678 23.354479303434722 26.914990273059164 24.976804394705432 41 24.095660255346157 23.5798685640139 26.901433024302523 25.42303815633742 42 23.686708927794943 23.739820990395536 27.2382844380116 25.335185643797924 43 23.427118426034234 23.352515042961457 27.06723971719271 26.1531268138116 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 75.0 1 116.5 2 158.0 3 368.0 4 578.0 5 578.0 6 726.5 7 875.0 8 846.0 9 817.0 10 1097.5 11 1378.0 12 1378.0 13 2337.0 14 3296.0 15 4595.0 16 5894.0 17 5943.5 18 5993.0 19 5993.0 20 7565.0 21 9137.0 22 10431.5 23 11726.0 24 14748.0 25 17770.0 26 17770.0 27 22237.0 28 26704.0 29 31660.0 30 36616.0 31 44052.0 32 51488.0 33 51488.0 34 60446.5 35 69405.0 36 79368.5 37 89332.0 38 102082.0 39 114832.0 40 114832.0 41 127357.0 42 139882.0 43 154049.0 44 168216.0 45 184147.0 46 200078.0 47 200078.0 48 216102.0 49 232126.0 50 242002.0 51 251878.0 52 252663.0 53 253448.0 54 253448.0 55 237263.0 56 221078.0 57 202036.5 58 182995.0 59 167999.0 60 153003.0 61 153003.0 62 134073.0 63 115143.0 64 97502.0 65 79861.0 66 67616.5 67 55372.0 68 55372.0 69 45790.5 70 36209.0 71 30234.5 72 24260.0 73 19798.0 74 15336.0 75 15336.0 76 12576.5 77 9817.0 78 7781.5 79 5746.0 80 4432.0 81 3118.0 82 3118.0 83 2346.5 84 1575.0 85 1181.0 86 787.0 87 526.5 88 266.0 89 266.0 90 176.0 91 86.0 92 56.5 93 27.0 94 18.0 95 9.0 96 9.0 97 7.5 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2596397.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.54801172217626 #Duplication Level Percentage of deduplicated Percentage of total 1 86.76428147496658 61.21047546562143 2 7.47334788332444 10.544596681533475 3 2.2641006827812196 4.791834045271102 4 1.066164784868352 3.008632229626561 5 0.6078038563869937 2.1439676792586786 6 0.40626139466315697 1.7196560179778442 7 0.26975743418022935 1.3321595440083707 8 0.1995995403391472 1.126508056926972 9 0.1573304100219071 0.9989412849432268 >10 0.7459708927670584 9.02124109519238 >50 0.0303069355645646 1.4317690830644703 >100 0.013873219463800686 1.7416425830267368 >500 7.099717610960105E-4 0.3355835440253437 >1k 4.915189114851216E-4 0.5929926895234916 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.85149112404613E-5 7.70298224809226E-5 5 0.0 0.0 0.0 3.85149112404613E-5 7.70298224809226E-5 6 0.0 0.0 0.0 3.85149112404613E-5 1.155447337213839E-4 7 0.0 0.0 0.0 3.85149112404613E-5 1.155447337213839E-4 8 0.0 0.0 0.0 3.85149112404613E-5 1.155447337213839E-4 9 0.0 0.0 0.0 3.85149112404613E-5 1.540596449618452E-4 10 0.0 0.0 0.0 3.85149112404613E-5 1.540596449618452E-4 11 0.0 0.0 0.0 3.85149112404613E-5 1.540596449618452E-4 12 0.0 0.0 0.0 3.85149112404613E-5 1.540596449618452E-4 13 0.0 0.0 0.0 3.85149112404613E-5 1.540596449618452E-4 14 0.0 0.0 0.0 7.70298224809226E-5 2.310894674427678E-4 15 3.85149112404613E-5 0.0 0.0 7.70298224809226E-5 2.696043786832291E-4 16 3.85149112404613E-5 0.0 0.0 1.155447337213839E-4 3.466342011641517E-4 17 3.85149112404613E-5 0.0 0.0 1.925745562023065E-4 3.466342011641517E-4 18 3.85149112404613E-5 0.0 0.0 2.696043786832291E-4 4.236640236450743E-4 19 3.85149112404613E-5 0.0 0.0 4.236640236450743E-4 4.236640236450743E-4 20 3.85149112404613E-5 0.0 0.0 5.777236686069195E-4 4.621789348855356E-4 21 3.85149112404613E-5 0.0 0.0 9.243578697710712E-4 4.621789348855356E-4 22 3.85149112404613E-5 0.0 0.0 0.0016946560945802973 4.621789348855356E-4 23 3.85149112404613E-5 0.0 0.0 0.0023879244969086007 5.777236686069195E-4 24 3.85149112404613E-5 0.0 0.0 0.003812976212805669 5.777236686069195E-4 25 3.85149112404613E-5 0.0 0.0 0.005238027928702737 5.777236686069195E-4 26 3.85149112404613E-5 0.0 0.0 0.0072793182244471856 6.162385798473808E-4 27 3.85149112404613E-5 0.0 0.0 0.01744725479192897 6.162385798473808E-4 28 3.85149112404613E-5 0.0 0.0 0.050030869701359226 6.162385798473808E-4 29 3.85149112404613E-5 0.0 0.0 0.09359123431432097 6.162385798473808E-4 30 3.85149112404613E-5 0.0 0.0 0.15432924934052844 6.162385798473808E-4 31 3.85149112404613E-5 0.0 0.0 0.4518184237618515 6.162385798473808E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 95 1.678145E-7 19.473684 5 CGCGCAT 50 0.0070372117 18.499998 10 CTTATAC 1510 0.0 17.274836 37 CGCAATC 130 2.5924237E-7 15.653846 22 TCTTATA 2540 0.0 15.149606 37 TACCCCG 120 3.303506E-5 13.875001 5 CGCGCAA 160 1.7859202E-7 13.875 20 TATACTG 515 0.0 13.291262 5 GTATAAG 405 0.0 13.246914 1 CGTATAC 85 0.009408899 13.058824 3 CCCTATA 170 3.7363134E-7 13.058824 2 GTATACG 120 5.1253E-4 12.333334 1 GGGTACG 105 0.0026451154 12.333333 1 TAGGCCG 150 1.9456513E-5 12.333333 5 TAAGAGT 535 0.0 12.102803 4 TTAGAGT 370 0.0 11.5 4 GTATATA 405 0.0 11.419753 1 GTTACGG 685 0.0 11.343065 25 GGACCGT 230 1.024564E-7 11.26087 6 GTATTAG 330 1.0913936E-11 11.21212 1 >>END_MODULE